co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G08890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010432: bract development	0.00E+00
2	GO:0009667: plastid inner membrane organization	0.00E+00
3	GO:1904526: regulation of microtubule binding	0.00E+00
4	GO:0080021: response to benzoic acid	0.00E+00
5	GO:0010451: floral meristem growth	0.00E+00
6	GO:0009631: cold acclimation	5.84E-11
7	GO:0009409: response to cold	3.01E-09
8	GO:0009737: response to abscisic acid	3.97E-07
9	GO:0009414: response to water deprivation	4.55E-07
10	GO:0009415: response to water	3.84E-06
11	GO:0009873: ethylene-activated signaling pathway	5.68E-06
12	GO:0035435: phosphate ion transmembrane transport	8.46E-05
13	GO:0045926: negative regulation of growth	1.17E-04
14	GO:0009819: drought recovery	1.97E-04
15	GO:0009609: response to symbiotic bacterium	2.25E-04
16	GO:0019760: glucosinolate metabolic process	2.90E-04
17	GO:0006970: response to osmotic stress	3.20E-04
18	GO:0010200: response to chitin	4.43E-04
19	GO:0000038: very long-chain fatty acid metabolic process	4.76E-04
20	GO:0071422: succinate transmembrane transport	5.00E-04
21	GO:0031407: oxylipin metabolic process	5.00E-04
22	GO:1901679: nucleotide transmembrane transport	5.00E-04
23	GO:0015786: UDP-glucose transport	5.00E-04
24	GO:0010507: negative regulation of autophagy	5.00E-04
25	GO:0015709: thiosulfate transport	5.00E-04
26	GO:0050826: response to freezing	6.19E-04
27	GO:0006633: fatty acid biosynthetic process	6.72E-04
28	GO:0010150: leaf senescence	7.76E-04
29	GO:0009751: response to salicylic acid	8.12E-04
30	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	8.13E-04
31	GO:0015783: GDP-fucose transport	8.13E-04
32	GO:0080121: AMP transport	8.13E-04
33	GO:0044210: 'de novo' CTP biosynthetic process	8.13E-04
34	GO:0010025: wax biosynthetic process	8.64E-04
35	GO:0009269: response to desiccation	1.15E-03
36	GO:0051259: protein oligomerization	1.16E-03
37	GO:0006624: vacuolar protein processing	1.16E-03
38	GO:0010371: regulation of gibberellin biosynthetic process	1.16E-03
39	GO:1901000: regulation of response to salt stress	1.16E-03
40	GO:0015729: oxaloacetate transport	1.16E-03
41	GO:0072334: UDP-galactose transmembrane transport	1.16E-03
42	GO:0030100: regulation of endocytosis	1.16E-03
43	GO:0042538: hyperosmotic salinity response	1.27E-03
44	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.36E-03
45	GO:0001944: vasculature development	1.36E-03
46	GO:0046345: abscisic acid catabolic process	1.54E-03
47	GO:0022622: root system development	1.54E-03
48	GO:0006552: leucine catabolic process	1.54E-03
49	GO:0071585: detoxification of cadmium ion	1.54E-03
50	GO:0015867: ATP transport	1.54E-03
51	GO:0070417: cellular response to cold	1.60E-03
52	GO:0042631: cellular response to water deprivation	1.73E-03
53	GO:0042335: cuticle development	1.73E-03
54	GO:0048868: pollen tube development	1.87E-03
55	GO:0006461: protein complex assembly	1.97E-03
56	GO:0006665: sphingolipid metabolic process	1.97E-03
57	GO:0009247: glycolipid biosynthetic process	1.97E-03
58	GO:0070897: DNA-templated transcriptional preinitiation complex assembly	1.97E-03
59	GO:0071423: malate transmembrane transport	1.97E-03
60	GO:0009823: cytokinin catabolic process	1.97E-03
61	GO:0006656: phosphatidylcholine biosynthetic process	1.97E-03
62	GO:0009697: salicylic acid biosynthetic process	1.97E-03
63	GO:0000302: response to reactive oxygen species	2.30E-03
64	GO:0009611: response to wounding	2.36E-03
65	GO:0015866: ADP transport	2.43E-03
66	GO:0045962: positive regulation of development, heterochronic	2.43E-03
67	GO:1900425: negative regulation of defense response to bacterium	2.43E-03
68	GO:0010337: regulation of salicylic acid metabolic process	2.43E-03
69	GO:0006574: valine catabolic process	2.43E-03
70	GO:0030154: cell differentiation	2.67E-03
71	GO:0009828: plant-type cell wall loosening	2.78E-03
72	GO:0010555: response to mannitol	2.91E-03
73	GO:0071470: cellular response to osmotic stress	2.91E-03
74	GO:0009082: branched-chain amino acid biosynthetic process	2.91E-03
75	GO:0098655: cation transmembrane transport	2.91E-03
76	GO:0010286: heat acclimation	2.95E-03
77	GO:0009651: response to salt stress	3.14E-03
78	GO:0032880: regulation of protein localization	3.43E-03
79	GO:0009610: response to symbiotic fungus	3.43E-03
80	GO:0030497: fatty acid elongation	3.43E-03
81	GO:0008272: sulfate transport	3.43E-03
82	GO:1902074: response to salt	3.43E-03
83	GO:0010103: stomatal complex morphogenesis	3.43E-03
84	GO:0006355: regulation of transcription, DNA-templated	3.94E-03
85	GO:0008610: lipid biosynthetic process	3.98E-03
86	GO:0035265: organ growth	3.98E-03
87	GO:0009690: cytokinin metabolic process	3.98E-03
88	GO:0019375: galactolipid biosynthetic process	3.98E-03
89	GO:0050821: protein stabilization	3.98E-03
90	GO:0007623: circadian rhythm	4.34E-03
91	GO:0045490: pectin catabolic process	4.34E-03
92	GO:0006811: ion transport	4.75E-03
93	GO:0010345: suberin biosynthetic process	5.16E-03
94	GO:0098656: anion transmembrane transport	5.16E-03
95	GO:0016051: carbohydrate biosynthetic process	5.46E-03
96	GO:0042761: very long-chain fatty acid biosynthetic process	5.79E-03
97	GO:2000280: regulation of root development	5.79E-03
98	GO:0006839: mitochondrial transport	6.22E-03
99	GO:0009641: shade avoidance	6.45E-03
100	GO:0006949: syncytium formation	6.45E-03
101	GO:0009744: response to sucrose	7.04E-03
102	GO:0051707: response to other organism	7.04E-03
103	GO:0018119: peptidyl-cysteine S-nitrosylation	7.13E-03
104	GO:0009644: response to high light intensity	7.61E-03
105	GO:0045037: protein import into chloroplast stroma	7.84E-03
106	GO:0010582: floral meristem determinacy	7.84E-03
107	GO:0018107: peptidyl-threonine phosphorylation	8.57E-03
108	GO:0009725: response to hormone	8.57E-03
109	GO:2000012: regulation of auxin polar transport	8.57E-03
110	GO:0010102: lateral root morphogenesis	8.57E-03
111	GO:0009664: plant-type cell wall organization	8.84E-03
112	GO:0009416: response to light stimulus	8.96E-03
113	GO:0009809: lignin biosynthetic process	9.50E-03
114	GO:0006351: transcription, DNA-templated	9.73E-03
115	GO:0010167: response to nitrate	1.01E-02
116	GO:0070588: calcium ion transmembrane transport	1.01E-02
117	GO:0009833: plant-type primary cell wall biogenesis	1.09E-02
118	GO:0043086: negative regulation of catalytic activity	1.12E-02
119	GO:0030150: protein import into mitochondrial matrix	1.17E-02
120	GO:0007017: microtubule-based process	1.26E-02
121	GO:0009695: jasmonic acid biosynthetic process	1.26E-02
122	GO:0042545: cell wall modification	1.32E-02
123	GO:0051260: protein homooligomerization	1.34E-02
124	GO:0031408: oxylipin biosynthetic process	1.34E-02
125	GO:0009624: response to nematode	1.36E-02
126	GO:0010017: red or far-red light signaling pathway	1.43E-02
127	GO:0080092: regulation of pollen tube growth	1.43E-02
128	GO:0008284: positive regulation of cell proliferation	1.71E-02
129	GO:0009753: response to jasmonic acid	1.79E-02
130	GO:0000226: microtubule cytoskeleton organization	1.81E-02
131	GO:0050832: defense response to fungus	1.88E-02
132	GO:0010268: brassinosteroid homeostasis	1.91E-02
133	GO:0009960: endosperm development	1.91E-02
134	GO:0045489: pectin biosynthetic process	1.91E-02
135	GO:0009958: positive gravitropism	1.91E-02
136	GO:0010183: pollen tube guidance	2.11E-02
137	GO:0009749: response to glucose	2.11E-02
138	GO:0016132: brassinosteroid biosynthetic process	2.22E-02
139	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.22E-02
140	GO:0010583: response to cyclopentenone	2.32E-02
141	GO:1901657: glycosyl compound metabolic process	2.43E-02
142	GO:0016125: sterol metabolic process	2.54E-02
143	GO:0009639: response to red or far red light	2.54E-02
144	GO:0071555: cell wall organization	2.58E-02
145	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.63E-02
146	GO:0009739: response to gibberellin	2.63E-02
147	GO:0006904: vesicle docking involved in exocytosis	2.65E-02
148	GO:0006470: protein dephosphorylation	2.69E-02
149	GO:0007166: cell surface receptor signaling pathway	2.69E-02
150	GO:0009911: positive regulation of flower development	2.88E-02
151	GO:0010027: thylakoid membrane organization	2.88E-02
152	GO:0009908: flower development	2.96E-02
153	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.00E-02
154	GO:0010029: regulation of seed germination	3.00E-02
155	GO:0009627: systemic acquired resistance	3.12E-02
156	GO:0006974: cellular response to DNA damage stimulus	3.12E-02
157	GO:0006950: response to stress	3.24E-02
158	GO:0016049: cell growth	3.36E-02
159	GO:0009826: unidimensional cell growth	3.50E-02
160	GO:0007568: aging	3.86E-02
161	GO:0048527: lateral root development	3.86E-02
162	GO:0009637: response to blue light	4.12E-02
163	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.64E-02
164	GO:0006631: fatty acid metabolic process	4.66E-02
165	GO:0005975: carbohydrate metabolic process	4.72E-02
166	GO:0008283: cell proliferation	4.93E-02
167	GO:0010114: response to red light	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0005534: galactose binding	0.00E+00
2	GO:0009922: fatty acid elongase activity	4.54E-07
3	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.25E-06
4	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.25E-06
5	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.25E-06
6	GO:0003883: CTP synthase activity	1.97E-05
7	GO:0044212: transcription regulatory region DNA binding	2.94E-05
8	GO:0043565: sequence-specific DNA binding	1.35E-04
9	GO:0004105: choline-phosphate cytidylyltransferase activity	2.25E-04
10	GO:0017040: ceramidase activity	5.00E-04
11	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	5.00E-04
12	GO:0015117: thiosulfate transmembrane transporter activity	5.00E-04
13	GO:1901677: phosphate transmembrane transporter activity	5.00E-04
14	GO:0016629: 12-oxophytodienoate reductase activity	5.00E-04
15	GO:0008083: growth factor activity	6.96E-04
16	GO:0005457: GDP-fucose transmembrane transporter activity	8.13E-04
17	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.13E-04
18	GO:0015141: succinate transmembrane transporter activity	8.13E-04
19	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.13E-04
20	GO:0046423: allene-oxide cyclase activity	8.13E-04
21	GO:0052655: L-valine transaminase activity	1.16E-03
22	GO:0015131: oxaloacetate transmembrane transporter activity	1.16E-03
23	GO:0035250: UDP-galactosyltransferase activity	1.16E-03
24	GO:0005460: UDP-glucose transmembrane transporter activity	1.16E-03
25	GO:0052656: L-isoleucine transaminase activity	1.16E-03
26	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.16E-03
27	GO:0052654: L-leucine transaminase activity	1.16E-03
28	GO:0004084: branched-chain-amino-acid transaminase activity	1.54E-03
29	GO:0005459: UDP-galactose transmembrane transporter activity	1.97E-03
30	GO:0019139: cytokinin dehydrogenase activity	1.97E-03
31	GO:0080122: AMP transmembrane transporter activity	1.97E-03
32	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.97E-03
33	GO:0004872: receptor activity	2.15E-03
34	GO:0015217: ADP transmembrane transporter activity	2.91E-03
35	GO:0005347: ATP transmembrane transporter activity	2.91E-03
36	GO:0016621: cinnamoyl-CoA reductase activity	3.43E-03
37	GO:0015140: malate transmembrane transporter activity	3.43E-03
38	GO:0004620: phospholipase activity	3.43E-03
39	GO:0046910: pectinesterase inhibitor activity	3.97E-03
40	GO:0015288: porin activity	3.98E-03
41	GO:0016209: antioxidant activity	3.98E-03
42	GO:0052747: sinapyl alcohol dehydrogenase activity	3.98E-03
43	GO:0015020: glucuronosyltransferase activity	6.45E-03
44	GO:0015116: sulfate transmembrane transporter activity	7.84E-03
45	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.84E-03
46	GO:0005262: calcium channel activity	8.57E-03
47	GO:0015114: phosphate ion transmembrane transporter activity	8.57E-03
48	GO:0015266: protein channel activity	8.57E-03
49	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.33E-03
50	GO:0008146: sulfotransferase activity	1.01E-02
51	GO:0017025: TBP-class protein binding	1.01E-02
52	GO:0045330: aspartyl esterase activity	1.05E-02
53	GO:0061630: ubiquitin protein ligase activity	1.06E-02
54	GO:0004857: enzyme inhibitor activity	1.17E-02
55	GO:0030599: pectinesterase activity	1.28E-02
56	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.36E-02
57	GO:0016746: transferase activity, transferring acyl groups	1.40E-02
58	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.43E-02
59	GO:0030570: pectate lyase activity	1.53E-02
60	GO:0010181: FMN binding	2.01E-02
61	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.19E-02
62	GO:0015297: antiporter activity	2.24E-02
63	GO:0004197: cysteine-type endopeptidase activity	2.32E-02
64	GO:0005200: structural constituent of cytoskeleton	2.65E-02
65	GO:0003677: DNA binding	2.80E-02
66	GO:0008375: acetylglucosaminyltransferase activity	3.12E-02
67	GO:0102483: scopolin beta-glucosidase activity	3.24E-02
68	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.36E-02
69	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.48E-02
70	GO:0005096: GTPase activator activity	3.61E-02
71	GO:0004222: metalloendopeptidase activity	3.73E-02
72	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.86E-02
73	GO:0003993: acid phosphatase activity	4.25E-02
74	GO:0008422: beta-glucosidase activity	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0034426: etioplast membrane	0.00E+00
2	GO:0031357: integral component of chloroplast inner membrane	2.37E-06
3	GO:0009527: plastid outer membrane	1.54E-03
4	GO:0005798: Golgi-associated vesicle	2.43E-03
5	GO:0009505: plant-type cell wall	3.52E-03
6	GO:0031305: integral component of mitochondrial inner membrane	3.98E-03
7	GO:0046930: pore complex	4.56E-03
8	GO:0005618: cell wall	4.66E-03
9	GO:0031225: anchored component of membrane	4.95E-03
10	GO:0045298: tubulin complex	5.16E-03
11	GO:0046658: anchored component of plasma membrane	6.20E-03
12	GO:0009941: chloroplast envelope	6.95E-03
13	GO:0016020: membrane	8.12E-03
14	GO:0031012: extracellular matrix	8.57E-03
15	GO:0005769: early endosome	1.09E-02
16	GO:0005743: mitochondrial inner membrane	1.49E-02
17	GO:0015629: actin cytoskeleton	1.53E-02
18	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.62E-02
19	GO:0005622: intracellular	2.13E-02
20	GO:0000145: exocyst	2.32E-02
21	GO:0005576: extracellular region	2.33E-02
22	GO:0005615: extracellular space	2.63E-02
23	GO:0009707: chloroplast outer membrane	3.48E-02
24	GO:0005874: microtubule	4.34E-02