GO Enrichment Analysis of Co-expressed Genes with
AT1G08580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 2 | GO:1990481: mRNA pseudouridine synthesis | 0.00E+00 |
| 3 | GO:0000495: box H/ACA snoRNA 3'-end processing | 0.00E+00 |
| 4 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 5 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 6 | GO:0006412: translation | 4.47E-59 |
| 7 | GO:0042254: ribosome biogenesis | 8.15E-18 |
| 8 | GO:0006364: rRNA processing | 7.68E-08 |
| 9 | GO:0006626: protein targeting to mitochondrion | 1.05E-07 |
| 10 | GO:0010162: seed dormancy process | 4.05E-06 |
| 11 | GO:0000494: box C/D snoRNA 3'-end processing | 1.33E-04 |
| 12 | GO:1990258: histone glutamine methylation | 1.33E-04 |
| 13 | GO:0031120: snRNA pseudouridine synthesis | 1.33E-04 |
| 14 | GO:0031118: rRNA pseudouridine synthesis | 1.33E-04 |
| 15 | GO:0030490: maturation of SSU-rRNA | 1.33E-04 |
| 16 | GO:0048569: post-embryonic animal organ development | 3.07E-04 |
| 17 | GO:0009967: positive regulation of signal transduction | 3.07E-04 |
| 18 | GO:0000027: ribosomal large subunit assembly | 4.74E-04 |
| 19 | GO:0030150: protein import into mitochondrial matrix | 4.74E-04 |
| 20 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.74E-04 |
| 21 | GO:0045039: protein import into mitochondrial inner membrane | 5.06E-04 |
| 22 | GO:0009735: response to cytokinin | 5.32E-04 |
| 23 | GO:0009294: DNA mediated transformation | 6.80E-04 |
| 24 | GO:0006164: purine nucleotide biosynthetic process | 7.24E-04 |
| 25 | GO:0009855: determination of bilateral symmetry | 7.24E-04 |
| 26 | GO:0010197: polar nucleus fusion | 9.22E-04 |
| 27 | GO:0042274: ribosomal small subunit biogenesis | 9.59E-04 |
| 28 | GO:0042273: ribosomal large subunit biogenesis | 9.59E-04 |
| 29 | GO:0031167: rRNA methylation | 1.21E-03 |
| 30 | GO:0000470: maturation of LSU-rRNA | 1.49E-03 |
| 31 | GO:0000741: karyogamy | 1.49E-03 |
| 32 | GO:0009955: adaxial/abaxial pattern specification | 1.78E-03 |
| 33 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.78E-03 |
| 34 | GO:0080186: developmental vegetative growth | 2.09E-03 |
| 35 | GO:0000028: ribosomal small subunit assembly | 2.42E-03 |
| 36 | GO:0001510: RNA methylation | 2.77E-03 |
| 37 | GO:0001558: regulation of cell growth | 2.77E-03 |
| 38 | GO:0007338: single fertilization | 3.13E-03 |
| 39 | GO:0006189: 'de novo' IMP biosynthetic process | 3.13E-03 |
| 40 | GO:0030422: production of siRNA involved in RNA interference | 3.89E-03 |
| 41 | GO:0006820: anion transport | 4.72E-03 |
| 42 | GO:0006414: translational elongation | 5.36E-03 |
| 43 | GO:0016569: covalent chromatin modification | 6.11E-03 |
| 44 | GO:0009553: embryo sac development | 6.29E-03 |
| 45 | GO:0051302: regulation of cell division | 7.51E-03 |
| 46 | GO:0007005: mitochondrion organization | 8.55E-03 |
| 47 | GO:0071215: cellular response to abscisic acid stimulus | 9.08E-03 |
| 48 | GO:0040007: growth | 9.08E-03 |
| 49 | GO:0006413: translational initiation | 1.05E-02 |
| 50 | GO:0008033: tRNA processing | 1.08E-02 |
| 51 | GO:0010501: RNA secondary structure unwinding | 1.08E-02 |
| 52 | GO:0000413: protein peptidyl-prolyl isomerization | 1.08E-02 |
| 53 | GO:0009960: endosperm development | 1.13E-02 |
| 54 | GO:0009567: double fertilization forming a zygote and endosperm | 1.51E-02 |
| 55 | GO:0016049: cell growth | 1.99E-02 |
| 56 | GO:0006811: ion transport | 2.21E-02 |
| 57 | GO:0048527: lateral root development | 2.29E-02 |
| 58 | GO:0006099: tricarboxylic acid cycle | 2.52E-02 |
| 59 | GO:0000154: rRNA modification | 3.18E-02 |
| 60 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.35E-02 |
| 61 | GO:0048367: shoot system development | 4.17E-02 |
| 62 | GO:0015031: protein transport | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 2 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 1.14E-69 |
| 4 | GO:0019843: rRNA binding | 1.33E-11 |
| 5 | GO:0003729: mRNA binding | 7.55E-09 |
| 6 | GO:0003723: RNA binding | 2.47E-08 |
| 7 | GO:0004407: histone deacetylase activity | 1.85E-05 |
| 8 | GO:0030515: snoRNA binding | 6.86E-05 |
| 9 | GO:0048037: cofactor binding | 1.33E-04 |
| 10 | GO:1990259: histone-glutamine methyltransferase activity | 1.33E-04 |
| 11 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.98E-04 |
| 12 | GO:0003746: translation elongation factor activity | 2.73E-04 |
| 13 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 3.07E-04 |
| 14 | GO:0005078: MAP-kinase scaffold activity | 3.07E-04 |
| 15 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 3.07E-04 |
| 16 | GO:0070181: small ribosomal subunit rRNA binding | 5.06E-04 |
| 17 | GO:0008649: rRNA methyltransferase activity | 5.06E-04 |
| 18 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 5.06E-04 |
| 19 | GO:0000166: nucleotide binding | 6.24E-04 |
| 20 | GO:0008026: ATP-dependent helicase activity | 9.34E-04 |
| 21 | GO:0008235: metalloexopeptidase activity | 2.09E-03 |
| 22 | GO:0050897: cobalt ion binding | 2.41E-03 |
| 23 | GO:0015288: porin activity | 2.42E-03 |
| 24 | GO:0008308: voltage-gated anion channel activity | 2.77E-03 |
| 25 | GO:0008135: translation factor activity, RNA binding | 2.77E-03 |
| 26 | GO:0001055: RNA polymerase II activity | 3.50E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 4.30E-03 |
| 28 | GO:0044183: protein binding involved in protein folding | 4.30E-03 |
| 29 | GO:0001056: RNA polymerase III activity | 4.72E-03 |
| 30 | GO:0000049: tRNA binding | 4.72E-03 |
| 31 | GO:0015266: protein channel activity | 5.15E-03 |
| 32 | GO:0009982: pseudouridine synthase activity | 5.15E-03 |
| 33 | GO:0051087: chaperone binding | 7.51E-03 |
| 34 | GO:0003743: translation initiation factor activity | 1.31E-02 |
| 35 | GO:0004004: ATP-dependent RNA helicase activity | 1.92E-02 |
| 36 | GO:0005507: copper ion binding | 2.08E-02 |
| 37 | GO:0003924: GTPase activity | 3.19E-02 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.26E-02 |
| 39 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.62E-02 |
| 40 | GO:0051082: unfolded protein binding | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0022625: cytosolic large ribosomal subunit | 1.22E-46 |
| 3 | GO:0005840: ribosome | 3.48E-44 |
| 4 | GO:0022626: cytosolic ribosome | 1.24E-42 |
| 5 | GO:0005730: nucleolus | 1.40E-32 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 2.68E-27 |
| 7 | GO:0009506: plasmodesma | 6.68E-13 |
| 8 | GO:0015934: large ribosomal subunit | 1.75E-10 |
| 9 | GO:0005829: cytosol | 1.93E-10 |
| 10 | GO:0005737: cytoplasm | 2.10E-09 |
| 11 | GO:0005774: vacuolar membrane | 5.18E-06 |
| 12 | GO:0005773: vacuole | 5.97E-06 |
| 13 | GO:0032040: small-subunit processome | 6.74E-06 |
| 14 | GO:0031428: box C/D snoRNP complex | 3.63E-05 |
| 15 | GO:0005742: mitochondrial outer membrane translocase complex | 1.12E-04 |
| 16 | GO:0005758: mitochondrial intermembrane space | 4.74E-04 |
| 17 | GO:0031429: box H/ACA snoRNP complex | 7.24E-04 |
| 18 | GO:0005834: heterotrimeric G-protein complex | 7.48E-04 |
| 19 | GO:0005618: cell wall | 7.88E-04 |
| 20 | GO:0016020: membrane | 9.38E-04 |
| 21 | GO:0005743: mitochondrial inner membrane | 1.10E-03 |
| 22 | GO:0016272: prefoldin complex | 1.78E-03 |
| 23 | GO:0046930: pore complex | 2.77E-03 |
| 24 | GO:0009507: chloroplast | 3.11E-03 |
| 25 | GO:0005736: DNA-directed RNA polymerase I complex | 3.13E-03 |
| 26 | GO:0005666: DNA-directed RNA polymerase III complex | 3.50E-03 |
| 27 | GO:0015030: Cajal body | 3.50E-03 |
| 28 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.89E-03 |
| 29 | GO:0005852: eukaryotic translation initiation factor 3 complex | 4.30E-03 |
| 30 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.72E-03 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 5.56E-03 |
| 32 | GO:0000419: DNA-directed RNA polymerase V complex | 6.53E-03 |
| 33 | GO:0015935: small ribosomal subunit | 8.02E-03 |
| 34 | GO:0005741: mitochondrial outer membrane | 8.02E-03 |
| 35 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 9.63E-03 |
| 36 | GO:0005759: mitochondrial matrix | 1.02E-02 |
| 37 | GO:0016592: mediator complex | 1.38E-02 |
| 38 | GO:0030529: intracellular ribonucleoprotein complex | 1.71E-02 |
| 39 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.91E-02 |
| 40 | GO:0005622: intracellular | 2.74E-02 |
| 41 | GO:0005739: mitochondrion | 3.59E-02 |