Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000023: maltose metabolic process0.00E+00
2GO:1905421: regulation of plant organ morphogenesis0.00E+00
3GO:0002184: cytoplasmic translational termination0.00E+00
4GO:0030155: regulation of cell adhesion0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:0017038: protein import0.00E+00
7GO:0090627: plant epidermal cell differentiation0.00E+00
8GO:0090279: regulation of calcium ion import0.00E+00
9GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
10GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
11GO:0080114: positive regulation of glycine hydroxymethyltransferase activity0.00E+00
12GO:0005996: monosaccharide metabolic process0.00E+00
13GO:0016118: carotenoid catabolic process0.00E+00
14GO:0015717: triose phosphate transport0.00E+00
15GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
16GO:1905177: tracheary element differentiation0.00E+00
17GO:0018023: peptidyl-lysine trimethylation0.00E+00
18GO:0071474: cellular hyperosmotic response0.00E+00
19GO:0006429: leucyl-tRNA aminoacylation0.00E+00
20GO:0015979: photosynthesis1.07E-12
21GO:0009773: photosynthetic electron transport in photosystem I1.67E-10
22GO:0032544: plastid translation1.96E-09
23GO:0009735: response to cytokinin2.20E-08
24GO:0006000: fructose metabolic process4.40E-08
25GO:0006412: translation7.33E-07
26GO:0019252: starch biosynthetic process1.50E-06
27GO:0030388: fructose 1,6-bisphosphate metabolic process5.37E-06
28GO:0015995: chlorophyll biosynthetic process7.43E-06
29GO:0006418: tRNA aminoacylation for protein translation7.68E-06
30GO:0005978: glycogen biosynthetic process1.12E-05
31GO:0006002: fructose 6-phosphate metabolic process1.60E-05
32GO:0010206: photosystem II repair2.21E-05
33GO:0009658: chloroplast organization2.40E-05
34GO:0042254: ribosome biogenesis2.54E-05
35GO:0005982: starch metabolic process2.96E-05
36GO:0009409: response to cold3.64E-05
37GO:0005983: starch catabolic process6.09E-05
38GO:0019464: glycine decarboxylation via glycine cleavage system7.42E-05
39GO:0010021: amylopectin biosynthetic process7.42E-05
40GO:0010027: thylakoid membrane organization8.43E-05
41GO:0032543: mitochondrial translation1.16E-04
42GO:0010190: cytochrome b6f complex assembly1.68E-04
43GO:0061077: chaperone-mediated protein folding1.95E-04
44GO:1901259: chloroplast rRNA processing2.28E-04
45GO:0016117: carotenoid biosynthetic process3.13E-04
46GO:0006431: methionyl-tRNA aminoacylation3.44E-04
47GO:0000025: maltose catabolic process3.44E-04
48GO:0005980: glycogen catabolic process3.44E-04
49GO:0006438: valyl-tRNA aminoacylation3.44E-04
50GO:0080093: regulation of photorespiration3.44E-04
51GO:0043609: regulation of carbon utilization3.44E-04
52GO:0043007: maintenance of rDNA3.44E-04
53GO:0031998: regulation of fatty acid beta-oxidation3.44E-04
54GO:0034337: RNA folding3.44E-04
55GO:0009657: plastid organization4.56E-04
56GO:0010270: photosystem II oxygen evolving complex assembly7.51E-04
57GO:0051262: protein tetramerization7.51E-04
58GO:0009629: response to gravity7.51E-04
59GO:0016560: protein import into peroxisome matrix, docking7.51E-04
60GO:0016124: xanthophyll catabolic process7.51E-04
61GO:0019388: galactose catabolic process7.51E-04
62GO:0005976: polysaccharide metabolic process7.51E-04
63GO:0007154: cell communication7.51E-04
64GO:0018026: peptidyl-lysine monomethylation7.51E-04
65GO:0090342: regulation of cell aging7.51E-04
66GO:0097054: L-glutamate biosynthetic process7.51E-04
67GO:0031648: protein destabilization7.51E-04
68GO:0016121: carotene catabolic process7.51E-04
69GO:0005986: sucrose biosynthetic process1.12E-03
70GO:0006094: gluconeogenesis1.12E-03
71GO:0048281: inflorescence morphogenesis1.21E-03
72GO:0006518: peptide metabolic process1.21E-03
73GO:0010623: programmed cell death involved in cell development1.21E-03
74GO:0035436: triose phosphate transmembrane transport1.21E-03
75GO:0090153: regulation of sphingolipid biosynthetic process1.21E-03
76GO:0016050: vesicle organization1.21E-03
77GO:0006289: nucleotide-excision repair1.74E-03
78GO:0006537: glutamate biosynthetic process1.75E-03
79GO:0010731: protein glutathionylation1.75E-03
80GO:0006424: glutamyl-tRNA aminoacylation1.75E-03
81GO:0010148: transpiration1.75E-03
82GO:0009590: detection of gravity1.75E-03
83GO:0006515: misfolded or incompletely synthesized protein catabolic process1.75E-03
84GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.75E-03
85GO:1902358: sulfate transmembrane transport1.75E-03
86GO:0051322: anaphase2.35E-03
87GO:0006109: regulation of carbohydrate metabolic process2.35E-03
88GO:0045727: positive regulation of translation2.35E-03
89GO:0006546: glycine catabolic process2.35E-03
90GO:0010508: positive regulation of autophagy2.35E-03
91GO:0051205: protein insertion into membrane2.35E-03
92GO:0015713: phosphoglycerate transport2.35E-03
93GO:0006808: regulation of nitrogen utilization2.35E-03
94GO:0010109: regulation of photosynthesis2.35E-03
95GO:0019676: ammonia assimilation cycle2.35E-03
96GO:0015976: carbon utilization2.35E-03
97GO:0042742: defense response to bacterium2.52E-03
98GO:0006284: base-excision repair2.74E-03
99GO:0000304: response to singlet oxygen3.00E-03
100GO:0016120: carotene biosynthetic process3.00E-03
101GO:0006544: glycine metabolic process3.00E-03
102GO:0045038: protein import into chloroplast thylakoid membrane3.00E-03
103GO:0006097: glyoxylate cycle3.00E-03
104GO:0006461: protein complex assembly3.00E-03
105GO:0016123: xanthophyll biosynthetic process3.00E-03
106GO:0055114: oxidation-reduction process3.18E-03
107GO:0000470: maturation of LSU-rRNA3.71E-03
108GO:0009913: epidermal cell differentiation3.71E-03
109GO:0006828: manganese ion transport3.71E-03
110GO:0009643: photosynthetic acclimation3.71E-03
111GO:0006563: L-serine metabolic process3.71E-03
112GO:0009955: adaxial/abaxial pattern specification4.47E-03
113GO:0042026: protein refolding4.47E-03
114GO:0006458: 'de novo' protein folding4.47E-03
115GO:0030488: tRNA methylation4.47E-03
116GO:0070370: cellular heat acclimation5.27E-03
117GO:0010196: nonphotochemical quenching5.27E-03
118GO:0009645: response to low light intensity stimulus5.27E-03
119GO:0008272: sulfate transport5.27E-03
120GO:0010103: stomatal complex morphogenesis5.27E-03
121GO:0006605: protein targeting6.13E-03
122GO:0005975: carbohydrate metabolic process6.23E-03
123GO:0001558: regulation of cell growth7.03E-03
124GO:0017004: cytochrome complex assembly7.03E-03
125GO:0045454: cell redox homeostasis7.08E-03
126GO:0051865: protein autoubiquitination7.97E-03
127GO:0006783: heme biosynthetic process7.97E-03
128GO:0048481: plant ovule development8.05E-03
129GO:0009817: defense response to fungus, incompatible interaction8.05E-03
130GO:0010205: photoinhibition8.96E-03
131GO:0035999: tetrahydrofolate interconversion8.96E-03
132GO:0042761: very long-chain fatty acid biosynthetic process8.96E-03
133GO:0007623: circadian rhythm9.64E-03
134GO:0031627: telomeric loop formation1.00E-02
135GO:0006782: protoporphyrinogen IX biosynthetic process1.00E-02
136GO:0048829: root cap development1.00E-02
137GO:0009853: photorespiration1.02E-02
138GO:0034599: cellular response to oxidative stress1.07E-02
139GO:0006816: calcium ion transport1.11E-02
140GO:0009073: aromatic amino acid family biosynthetic process1.11E-02
141GO:0043085: positive regulation of catalytic activity1.11E-02
142GO:0000272: polysaccharide catabolic process1.11E-02
143GO:0006415: translational termination1.11E-02
144GO:0009750: response to fructose1.11E-02
145GO:0018119: peptidyl-cysteine S-nitrosylation1.11E-02
146GO:0016485: protein processing1.11E-02
147GO:0045037: protein import into chloroplast stroma1.22E-02
148GO:0010628: positive regulation of gene expression1.33E-02
149GO:0010102: lateral root morphogenesis1.33E-02
150GO:0006108: malate metabolic process1.33E-02
151GO:0006006: glucose metabolic process1.33E-02
152GO:0009767: photosynthetic electron transport chain1.33E-02
153GO:0019253: reductive pentose-phosphate cycle1.45E-02
154GO:0009266: response to temperature stimulus1.45E-02
155GO:0005985: sucrose metabolic process1.58E-02
156GO:0006810: transport1.64E-02
157GO:0010025: wax biosynthetic process1.70E-02
158GO:0006636: unsaturated fatty acid biosynthetic process1.70E-02
159GO:0009944: polarity specification of adaxial/abaxial axis1.83E-02
160GO:0000027: ribosomal large subunit assembly1.83E-02
161GO:0051302: regulation of cell division1.96E-02
162GO:0009768: photosynthesis, light harvesting in photosystem I1.96E-02
163GO:0007017: microtubule-based process1.96E-02
164GO:0019915: lipid storage2.10E-02
165GO:0031408: oxylipin biosynthetic process2.10E-02
166GO:0016226: iron-sulfur cluster assembly2.24E-02
167GO:2000022: regulation of jasmonic acid mediated signaling pathway2.24E-02
168GO:0035428: hexose transmembrane transport2.24E-02
169GO:0006979: response to oxidative stress2.34E-02
170GO:0009686: gibberellin biosynthetic process2.38E-02
171GO:0040007: growth2.38E-02
172GO:0001944: vasculature development2.38E-02
173GO:0010089: xylem development2.53E-02
174GO:0042631: cellular response to water deprivation2.83E-02
175GO:0042335: cuticle development2.83E-02
176GO:0006662: glycerol ether metabolic process2.99E-02
177GO:0048868: pollen tube development2.99E-02
178GO:0046323: glucose import2.99E-02
179GO:0009646: response to absence of light3.15E-02
180GO:0048825: cotyledon development3.31E-02
181GO:0000302: response to reactive oxygen species3.47E-02
182GO:0006281: DNA repair3.58E-02
183GO:0009790: embryo development3.72E-02
184GO:0030163: protein catabolic process3.81E-02
185GO:0010090: trichome morphogenesis3.81E-02
186GO:1901657: glycosyl compound metabolic process3.81E-02
187GO:0008152: metabolic process4.04E-02
188GO:0000910: cytokinesis4.33E-02
RankGO TermAdjusted P value
1GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
2GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
3GO:0005363: maltose transmembrane transporter activity0.00E+00
4GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
5GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
6GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
7GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
8GO:0016166: phytoene dehydrogenase activity0.00E+00
9GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
10GO:0004823: leucine-tRNA ligase activity0.00E+00
11GO:0004822: isoleucine-tRNA ligase activity0.00E+00
12GO:0046408: chlorophyll synthetase activity0.00E+00
13GO:0009899: ent-kaurene synthase activity0.00E+00
14GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
15GO:0019843: rRNA binding1.46E-14
16GO:0003735: structural constituent of ribosome3.41E-08
17GO:2001070: starch binding2.68E-06
18GO:0033201: alpha-1,4-glucan synthase activity5.37E-06
19GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.37E-06
20GO:0010297: heteropolysaccharide binding5.37E-06
21GO:0004324: ferredoxin-NADP+ reductase activity1.89E-05
22GO:0004373: glycogen (starch) synthase activity1.89E-05
23GO:0002161: aminoacyl-tRNA editing activity1.89E-05
24GO:0004812: aminoacyl-tRNA ligase activity1.97E-05
25GO:0009011: starch synthase activity7.42E-05
26GO:0008266: poly(U) RNA binding9.00E-05
27GO:0003959: NADPH dehydrogenase activity1.16E-04
28GO:0005528: FK506 binding1.47E-04
29GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.44E-04
30GO:0005227: calcium activated cation channel activity3.44E-04
31GO:0008184: glycogen phosphorylase activity3.44E-04
32GO:0004856: xylulokinase activity3.44E-04
33GO:0004134: 4-alpha-glucanotransferase activity3.44E-04
34GO:0004645: phosphorylase activity3.44E-04
35GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity3.44E-04
36GO:0008158: hedgehog receptor activity3.44E-04
37GO:0004853: uroporphyrinogen decarboxylase activity3.44E-04
38GO:0045485: omega-6 fatty acid desaturase activity3.44E-04
39GO:0004832: valine-tRNA ligase activity3.44E-04
40GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.44E-04
41GO:0008534: oxidized purine nucleobase lesion DNA N-glycosylase activity3.44E-04
42GO:0004825: methionine-tRNA ligase activity3.44E-04
43GO:0016041: glutamate synthase (ferredoxin) activity3.44E-04
44GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.05E-04
45GO:0003844: 1,4-alpha-glucan branching enzyme activity7.51E-04
46GO:0004614: phosphoglucomutase activity7.51E-04
47GO:0008967: phosphoglycolate phosphatase activity7.51E-04
48GO:0010291: carotene beta-ring hydroxylase activity7.51E-04
49GO:0044183: protein binding involved in protein folding8.68E-04
50GO:0008236: serine-type peptidase activity1.06E-03
51GO:0015462: ATPase-coupled protein transmembrane transporter activity1.21E-03
52GO:0043169: cation binding1.21E-03
53GO:0017150: tRNA dihydrouridine synthase activity1.21E-03
54GO:0045174: glutathione dehydrogenase (ascorbate) activity1.21E-03
55GO:0071917: triose-phosphate transmembrane transporter activity1.21E-03
56GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.75E-03
57GO:0004375: glycine dehydrogenase (decarboxylating) activity1.75E-03
58GO:0016149: translation release factor activity, codon specific1.75E-03
59GO:0016851: magnesium chelatase activity1.75E-03
60GO:0043023: ribosomal large subunit binding1.75E-03
61GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.35E-03
62GO:0019104: DNA N-glycosylase activity2.35E-03
63GO:0019199: transmembrane receptor protein kinase activity2.35E-03
64GO:0008878: glucose-1-phosphate adenylyltransferase activity2.35E-03
65GO:0042277: peptide binding2.35E-03
66GO:0015120: phosphoglycerate transmembrane transporter activity2.35E-03
67GO:0016279: protein-lysine N-methyltransferase activity2.35E-03
68GO:0004372: glycine hydroxymethyltransferase activity3.00E-03
69GO:0016773: phosphotransferase activity, alcohol group as acceptor3.00E-03
70GO:0004040: amidase activity3.00E-03
71GO:0051538: 3 iron, 4 sulfur cluster binding3.00E-03
72GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.00E-03
73GO:0008725: DNA-3-methyladenine glycosylase activity3.00E-03
74GO:0004130: cytochrome-c peroxidase activity3.71E-03
75GO:0016615: malate dehydrogenase activity3.71E-03
76GO:0048038: quinone binding4.26E-03
77GO:0051920: peroxiredoxin activity4.47E-03
78GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.47E-03
79GO:0030060: L-malate dehydrogenase activity4.47E-03
80GO:0005261: cation channel activity4.47E-03
81GO:0016491: oxidoreductase activity4.59E-03
82GO:0004033: aldo-keto reductase (NADP) activity6.13E-03
83GO:0016209: antioxidant activity6.13E-03
84GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen6.61E-03
85GO:0008271: secondary active sulfate transmembrane transporter activity7.03E-03
86GO:0008173: RNA methyltransferase activity7.03E-03
87GO:0004252: serine-type endopeptidase activity7.30E-03
88GO:0003747: translation release factor activity7.97E-03
89GO:0004222: metalloendopeptidase activity8.89E-03
90GO:0005384: manganese ion transmembrane transporter activity8.96E-03
91GO:0008047: enzyme activator activity1.00E-02
92GO:0047372: acylglycerol lipase activity1.11E-02
93GO:0003691: double-stranded telomeric DNA binding1.11E-02
94GO:0015386: potassium:proton antiporter activity1.11E-02
95GO:0015116: sulfate transmembrane transporter activity1.22E-02
96GO:0000049: tRNA binding1.22E-02
97GO:0004565: beta-galactosidase activity1.33E-02
98GO:0004022: alcohol dehydrogenase (NAD) activity1.33E-02
99GO:0004089: carbonate dehydratase activity1.33E-02
100GO:0015095: magnesium ion transmembrane transporter activity1.33E-02
101GO:0031072: heat shock protein binding1.33E-02
102GO:0000287: magnesium ion binding1.64E-02
103GO:0031409: pigment binding1.70E-02
104GO:0004857: enzyme inhibitor activity1.83E-02
105GO:0051536: iron-sulfur cluster binding1.83E-02
106GO:0015079: potassium ion transmembrane transporter activity1.96E-02
107GO:0003723: RNA binding2.07E-02
108GO:0004176: ATP-dependent peptidase activity2.10E-02
109GO:0003964: RNA-directed DNA polymerase activity2.10E-02
110GO:0003756: protein disulfide isomerase activity2.53E-02
111GO:0051082: unfolded protein binding2.55E-02
112GO:0047134: protein-disulfide reductase activity2.68E-02
113GO:0004791: thioredoxin-disulfide reductase activity3.15E-02
114GO:0005355: glucose transmembrane transporter activity3.15E-02
115GO:0050662: coenzyme binding3.15E-02
116GO:0016787: hydrolase activity3.32E-02
117GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.46E-02
118GO:0030170: pyridoxal phosphate binding3.54E-02
119GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.81E-02
120GO:0003684: damaged DNA binding3.98E-02
121GO:0005200: structural constituent of cytoskeleton4.15E-02
122GO:0008237: metallopeptidase activity4.15E-02
123GO:0016168: chlorophyll binding4.69E-02
RankGO TermAdjusted P value
1GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
3GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
4GO:0043233: organelle lumen0.00E+00
5GO:0044391: ribosomal subunit0.00E+00
6GO:0042579: microbody0.00E+00
7GO:0009507: chloroplast1.56E-83
8GO:0009570: chloroplast stroma1.04E-57
9GO:0009941: chloroplast envelope1.47E-49
10GO:0009534: chloroplast thylakoid1.23E-48
11GO:0009535: chloroplast thylakoid membrane6.78E-41
12GO:0009579: thylakoid1.78E-20
13GO:0009543: chloroplast thylakoid lumen4.38E-13
14GO:0031977: thylakoid lumen1.97E-12
15GO:0005840: ribosome3.44E-12
16GO:0031969: chloroplast membrane3.65E-08
17GO:0010319: stromule1.22E-07
18GO:0009706: chloroplast inner membrane9.33E-07
19GO:0010287: plastoglobule1.69E-06
20GO:0009508: plastid chromosome2.18E-06
21GO:0030095: chloroplast photosystem II2.90E-06
22GO:0030093: chloroplast photosystem I5.37E-06
23GO:0009538: photosystem I reaction center1.12E-05
24GO:0009501: amyloplast1.12E-05
25GO:0016020: membrane1.49E-05
26GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.21E-05
27GO:0048046: apoplast3.61E-05
28GO:0009295: nucleoid6.76E-05
29GO:0009654: photosystem II oxygen evolving complex1.70E-04
30GO:0009533: chloroplast stromal thylakoid2.96E-04
31GO:0009782: photosystem I antenna complex3.44E-04
32GO:0019898: extrinsic component of membrane4.63E-04
33GO:0000427: plastid-encoded plastid RNA polymerase complex7.51E-04
34GO:0043036: starch grain7.51E-04
35GO:0005782: peroxisomal matrix1.21E-03
36GO:0010007: magnesium chelatase complex1.21E-03
37GO:0009509: chromoplast1.21E-03
38GO:0009536: plastid1.29E-03
39GO:0005960: glycine cleavage complex1.75E-03
40GO:0042651: thylakoid membrane1.92E-03
41GO:0015935: small ribosomal subunit2.11E-03
42GO:0055035: plastid thylakoid membrane3.00E-03
43GO:0009522: photosystem I3.71E-03
44GO:0000783: nuclear telomere cap complex7.03E-03
45GO:0042644: chloroplast nucleoid7.97E-03
46GO:0045298: tubulin complex7.97E-03
47GO:0005763: mitochondrial small ribosomal subunit7.97E-03
48GO:0032040: small-subunit processome1.22E-02
49GO:0009574: preprophase band1.33E-02
50GO:0030076: light-harvesting complex1.58E-02
51GO:0043234: protein complex1.70E-02
52GO:0022626: cytosolic ribosome2.16E-02
53GO:0022625: cytosolic large ribosomal subunit2.35E-02
54GO:0005623: cell3.27E-02
55GO:0009523: photosystem II3.31E-02
56GO:0005759: mitochondrial matrix4.00E-02
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Gene type



Gene DE type