Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08360

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
2GO:0046487: glyoxylate metabolic process0.00E+00
3GO:1904874: positive regulation of telomerase RNA localization to Cajal body0.00E+00
4GO:0070918: production of small RNA involved in gene silencing by RNA0.00E+00
5GO:0007530: sex determination0.00E+00
6GO:1990569: UDP-N-acetylglucosamine transmembrane transport0.00E+00
7GO:0015789: UDP-N-acetylgalactosamine transport0.00E+00
8GO:0090239: regulation of histone H4 acetylation0.00E+00
9GO:0000740: nuclear membrane fusion0.00E+00
10GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process0.00E+00
11GO:0044843: cell cycle G1/S phase transition0.00E+00
12GO:1903857: negative regulation of cytokinin dehydrogenase activity0.00E+00
13GO:0006412: translation3.24E-159
14GO:0042254: ribosome biogenesis1.20E-66
15GO:0000027: ribosomal large subunit assembly4.10E-13
16GO:0006626: protein targeting to mitochondrion6.30E-07
17GO:0000028: ribosomal small subunit assembly1.42E-06
18GO:0009735: response to cytokinin5.80E-06
19GO:0009967: positive regulation of signal transduction2.04E-05
20GO:0009955: adaxial/abaxial pattern specification2.70E-05
21GO:1902626: assembly of large subunit precursor of preribosome6.64E-05
22GO:0002181: cytoplasmic translation6.64E-05
23GO:0000387: spliceosomal snRNP assembly1.45E-04
24GO:0006414: translational elongation2.00E-04
25GO:0000398: mRNA splicing, via spliceosome2.72E-04
26GO:0006820: anion transport2.75E-04
27GO:0043248: proteasome assembly4.90E-04
28GO:0030150: protein import into mitochondrial matrix5.98E-04
29GO:0006458: 'de novo' protein folding6.49E-04
30GO:0016444: somatic cell DNA recombination6.49E-04
31GO:0030490: maturation of SSU-rRNA6.91E-04
32GO:2001006: regulation of cellulose biosynthetic process6.91E-04
33GO:0006434: seryl-tRNA aminoacylation6.91E-04
34GO:0000494: box C/D snoRNA 3'-end processing6.91E-04
35GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.91E-04
36GO:0018002: N-terminal peptidyl-glutamic acid acetylation6.91E-04
37GO:0032365: intracellular lipid transport6.91E-04
38GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)6.91E-04
39GO:0006407: rRNA export from nucleus6.91E-04
40GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process6.91E-04
41GO:0031120: snRNA pseudouridine synthesis6.91E-04
42GO:0006475: internal protein amino acid acetylation6.91E-04
43GO:1990258: histone glutamine methylation6.91E-04
44GO:0031118: rRNA pseudouridine synthesis6.91E-04
45GO:0015801: aromatic amino acid transport6.91E-04
46GO:0017198: N-terminal peptidyl-serine acetylation6.91E-04
47GO:0009651: response to salt stress7.86E-04
48GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c8.29E-04
49GO:0009793: embryo development ending in seed dormancy1.17E-03
50GO:0010197: polar nucleus fusion1.44E-03
51GO:0048569: post-embryonic animal organ development1.49E-03
52GO:0043981: histone H4-K5 acetylation1.49E-03
53GO:0010198: synergid death1.49E-03
54GO:0015786: UDP-glucose transport1.49E-03
55GO:0051788: response to misfolded protein1.49E-03
56GO:0006435: threonyl-tRNA aminoacylation1.49E-03
57GO:0071668: plant-type cell wall assembly1.49E-03
58GO:2000072: regulation of defense response to fungus, incompatible interaction1.49E-03
59GO:0045041: protein import into mitochondrial intermembrane space1.49E-03
60GO:0098656: anion transmembrane transport1.50E-03
61GO:0008283: cell proliferation1.58E-03
62GO:0046686: response to cadmium ion2.01E-03
63GO:0042256: mature ribosome assembly2.46E-03
64GO:0046168: glycerol-3-phosphate catabolic process2.46E-03
65GO:0009150: purine ribonucleotide metabolic process2.46E-03
66GO:0045793: positive regulation of cell size2.46E-03
67GO:0015783: GDP-fucose transport2.46E-03
68GO:0010476: gibberellin mediated signaling pathway2.46E-03
69GO:0070301: cellular response to hydrogen peroxide3.58E-03
70GO:0051085: chaperone mediated protein folding requiring cofactor3.58E-03
71GO:0046653: tetrahydrofolate metabolic process3.58E-03
72GO:0006241: CTP biosynthetic process3.58E-03
73GO:0072334: UDP-galactose transmembrane transport3.58E-03
74GO:0009647: skotomorphogenesis3.58E-03
75GO:0006072: glycerol-3-phosphate metabolic process3.58E-03
76GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.58E-03
77GO:0006165: nucleoside diphosphate phosphorylation3.58E-03
78GO:0006168: adenine salvage3.58E-03
79GO:0006228: UTP biosynthetic process3.58E-03
80GO:0006164: purine nucleotide biosynthetic process3.58E-03
81GO:0009558: embryo sac cellularization3.58E-03
82GO:0032877: positive regulation of DNA endoreduplication3.58E-03
83GO:0046836: glycolipid transport3.58E-03
84GO:0007004: telomere maintenance via telomerase3.58E-03
85GO:0006166: purine ribonucleoside salvage3.58E-03
86GO:0051781: positive regulation of cell division4.83E-03
87GO:0042274: ribosomal small subunit biogenesis4.83E-03
88GO:0010387: COP9 signalosome assembly4.83E-03
89GO:0006183: GTP biosynthetic process4.83E-03
90GO:0010363: regulation of plant-type hypersensitive response4.83E-03
91GO:0006621: protein retention in ER lumen4.83E-03
92GO:0009165: nucleotide biosynthetic process4.83E-03
93GO:0009116: nucleoside metabolic process4.94E-03
94GO:0006289: nucleotide-excision repair4.94E-03
95GO:0000724: double-strand break repair via homologous recombination5.46E-03
96GO:0006334: nucleosome assembly6.01E-03
97GO:0061077: chaperone-mediated protein folding6.01E-03
98GO:0044209: AMP salvage6.21E-03
99GO:0071493: cellular response to UV-B6.21E-03
100GO:0031167: rRNA methylation6.21E-03
101GO:0019408: dolichol biosynthetic process6.21E-03
102GO:1902183: regulation of shoot apical meristem development6.21E-03
103GO:0015031: protein transport7.08E-03
104GO:0071215: cellular response to abscisic acid stimulus7.20E-03
105GO:0000470: maturation of LSU-rRNA7.71E-03
106GO:0045040: protein import into mitochondrial outer membrane7.71E-03
107GO:0000741: karyogamy7.71E-03
108GO:0009965: leaf morphogenesis9.32E-03
109GO:0009648: photoperiodism9.33E-03
110GO:1901001: negative regulation of response to salt stress9.33E-03
111GO:0000911: cytokinesis by cell plate formation9.33E-03
112GO:0042026: protein refolding9.33E-03
113GO:0000245: spliceosomal complex assembly9.33E-03
114GO:0006511: ubiquitin-dependent protein catabolic process1.06E-02
115GO:0048528: post-embryonic root development1.11E-02
116GO:0000338: protein deneddylation1.11E-02
117GO:0009645: response to low light intensity stimulus1.11E-02
118GO:0009396: folic acid-containing compound biosynthetic process1.11E-02
119GO:0032880: regulation of protein localization1.11E-02
120GO:0010183: pollen tube guidance1.15E-02
121GO:0006364: rRNA processing1.18E-02
122GO:0051603: proteolysis involved in cellular protein catabolic process1.23E-02
123GO:0006635: fatty acid beta-oxidation1.23E-02
124GO:0001522: pseudouridine synthesis1.29E-02
125GO:0009690: cytokinin metabolic process1.29E-02
126GO:0050821: protein stabilization1.29E-02
127GO:0031540: regulation of anthocyanin biosynthetic process1.29E-02
128GO:0001558: regulation of cell growth1.48E-02
129GO:0001510: RNA methylation1.48E-02
130GO:0006526: arginine biosynthetic process1.48E-02
131GO:0010204: defense response signaling pathway, resistance gene-independent1.48E-02
132GO:0044030: regulation of DNA methylation1.48E-02
133GO:0030968: endoplasmic reticulum unfolded protein response1.48E-02
134GO:0009808: lignin metabolic process1.48E-02
135GO:0007338: single fertilization1.69E-02
136GO:0009245: lipid A biosynthetic process1.69E-02
137GO:0048507: meristem development1.69E-02
138GO:0006189: 'de novo' IMP biosynthetic process1.69E-02
139GO:0048589: developmental growth1.69E-02
140GO:0009060: aerobic respiration1.69E-02
141GO:0015780: nucleotide-sugar transport1.69E-02
142GO:0035999: tetrahydrofolate interconversion1.90E-02
143GO:0045036: protein targeting to chloroplast2.12E-02
144GO:0010015: root morphogenesis2.35E-02
145GO:0006913: nucleocytoplasmic transport2.35E-02
146GO:0052544: defense response by callose deposition in cell wall2.35E-02
147GO:0015770: sucrose transport2.35E-02
148GO:0006790: sulfur compound metabolic process2.59E-02
149GO:0016925: protein sumoylation2.59E-02
150GO:0009845: seed germination2.71E-02
151GO:0010628: positive regulation of gene expression2.84E-02
152GO:0010102: lateral root morphogenesis2.84E-02
153GO:2000028: regulation of photoperiodism, flowering2.84E-02
154GO:0048467: gynoecium development3.10E-02
155GO:0006446: regulation of translational initiation3.10E-02
156GO:0006413: translational initiation3.36E-02
157GO:0009908: flower development3.53E-02
158GO:0006406: mRNA export from nucleus3.91E-02
159GO:0006487: protein N-linked glycosylation3.91E-02
160GO:0009644: response to high light intensity4.14E-02
161GO:0051302: regulation of cell division4.19E-02
162GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.21E-02
163GO:0006306: DNA methylation4.48E-02
164GO:0003333: amino acid transmembrane transport4.48E-02
165GO:0051260: protein homooligomerization4.48E-02
166GO:0010431: seed maturation4.48E-02
167GO:0009409: response to cold4.49E-02
168GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.62E-02
169GO:0007005: mitochondrion organization4.78E-02
RankGO TermAdjusted P value
1GO:0030272: 5-formyltetrahydrofolate cyclo-ligase activity0.00E+00
2GO:0103099: UDP-glucose:5-methylthiopentylhydroximate S-glucosyltransferase activity0.00E+00
3GO:0103101: UDP-glucose:7-methylthioheptylhydroximate S-glucosyltransferase activity0.00E+00
4GO:0034513: box H/ACA snoRNA binding0.00E+00
5GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity0.00E+00
6GO:0047251: thiohydroximate beta-D-glucosyltransferase activity0.00E+00
7GO:0004055: argininosuccinate synthase activity0.00E+00
8GO:0103103: UDP-glucose: 9-methylthiononylhydroximate S-glucosyltransferase activity0.00E+00
9GO:0103102: UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity0.00E+00
10GO:0103100: UDP-glucose: 6-methylthiohexylhydroximate S-glucosyltransferase activity0.00E+00
11GO:0102659: UDP-glucose: 4-methylthiobutylhydroximate S-glucosyltransferase activity0.00E+00
12GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity0.00E+00
13GO:0003735: structural constituent of ribosome3.22E-200
14GO:0003729: mRNA binding3.23E-38
15GO:0019843: rRNA binding1.84E-18
16GO:0015288: porin activity1.42E-06
17GO:0005078: MAP-kinase scaffold activity2.04E-05
18GO:0004298: threonine-type endopeptidase activity7.55E-05
19GO:0008308: voltage-gated anion channel activity8.38E-05
20GO:0003723: RNA binding9.10E-05
21GO:0008097: 5S rRNA binding1.38E-04
22GO:0003746: translation elongation factor activity1.78E-04
23GO:0044183: protein binding involved in protein folding2.27E-04
24GO:0008233: peptidase activity6.33E-04
25GO:0000824: inositol tetrakisphosphate 3-kinase activity6.91E-04
26GO:1990189: peptide-serine-N-acetyltransferase activity6.91E-04
27GO:0047326: inositol tetrakisphosphate 5-kinase activity6.91E-04
28GO:0004828: serine-tRNA ligase activity6.91E-04
29GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity6.91E-04
30GO:0005080: protein kinase C binding6.91E-04
31GO:1990190: peptide-glutamate-N-acetyltransferase activity6.91E-04
32GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity6.91E-04
33GO:1990259: histone-glutamine methyltransferase activity6.91E-04
34GO:0035614: snRNA stem-loop binding6.91E-04
35GO:0016817: hydrolase activity, acting on acid anhydrides6.91E-04
36GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity7.49E-04
37GO:0008121: ubiquinol-cytochrome-c reductase activity8.29E-04
38GO:0030515: snoRNA binding8.29E-04
39GO:0015173: aromatic amino acid transmembrane transporter activity1.49E-03
40GO:0070034: telomerase RNA binding1.49E-03
41GO:1990585: hydroxyproline O-arabinosyltransferase activity1.49E-03
42GO:0004829: threonine-tRNA ligase activity1.49E-03
43GO:0032934: sterol binding1.49E-03
44GO:0043141: ATP-dependent 5'-3' DNA helicase activity1.49E-03
45GO:0030619: U1 snRNA binding1.49E-03
46GO:0001055: RNA polymerase II activity1.78E-03
47GO:0001054: RNA polymerase I activity2.41E-03
48GO:0015462: ATPase-coupled protein transmembrane transporter activity2.46E-03
49GO:0032947: protein complex scaffold2.46E-03
50GO:0008649: rRNA methyltransferase activity2.46E-03
51GO:0070181: small ribosomal subunit rRNA binding2.46E-03
52GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity2.46E-03
53GO:0005457: GDP-fucose transmembrane transporter activity2.46E-03
54GO:0070180: large ribosomal subunit rRNA binding2.46E-03
55GO:0001056: RNA polymerase III activity2.76E-03
56GO:0015266: protein channel activity3.14E-03
57GO:0017089: glycolipid transporter activity3.58E-03
58GO:0004749: ribose phosphate diphosphokinase activity3.58E-03
59GO:0003999: adenine phosphoribosyltransferase activity3.58E-03
60GO:0005460: UDP-glucose transmembrane transporter activity3.58E-03
61GO:0004550: nucleoside diphosphate kinase activity3.58E-03
62GO:0047627: adenylylsulfatase activity3.58E-03
63GO:0051082: unfolded protein binding4.32E-03
64GO:0010011: auxin binding4.83E-03
65GO:0051861: glycolipid binding4.83E-03
66GO:0046923: ER retention sequence binding4.83E-03
67GO:0070628: proteasome binding4.83E-03
68GO:0005459: UDP-galactose transmembrane transporter activity6.21E-03
69GO:0004888: transmembrane signaling receptor activity6.21E-03
70GO:0045547: dehydrodolichyl diphosphate synthase activity6.21E-03
71GO:0005275: amine transmembrane transporter activity6.21E-03
72GO:0031386: protein tag6.21E-03
73GO:0031593: polyubiquitin binding7.71E-03
74GO:0031177: phosphopantetheine binding7.71E-03
75GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity7.71E-03
76GO:0051920: peroxiredoxin activity9.33E-03
77GO:0000035: acyl binding9.33E-03
78GO:0005338: nucleotide-sugar transmembrane transporter activity1.11E-02
79GO:0008235: metalloexopeptidase activity1.11E-02
80GO:0042162: telomeric DNA binding1.11E-02
81GO:0004872: receptor activity1.15E-02
82GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.18E-02
83GO:0016209: antioxidant activity1.29E-02
84GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.29E-02
85GO:0043022: ribosome binding1.29E-02
86GO:0008515: sucrose transmembrane transporter activity2.35E-02
87GO:0004129: cytochrome-c oxidase activity2.35E-02
88GO:0008794: arsenate reductase (glutaredoxin) activity2.35E-02
89GO:0031072: heat shock protein binding2.84E-02
90GO:0051119: sugar transmembrane transporter activity3.36E-02
91GO:0042393: histone binding3.38E-02
92GO:0043130: ubiquitin binding3.91E-02
93GO:0051536: iron-sulfur cluster binding3.91E-02
94GO:0005216: ion channel activity4.19E-02
95GO:0051087: chaperone binding4.19E-02
96GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.46E-02
97GO:0036459: thiol-dependent ubiquitinyl hydrolase activity4.48E-02
98GO:0004540: ribonuclease activity4.48E-02
RankGO TermAdjusted P value
1GO:0090661: box H/ACA telomerase RNP complex0.00E+00
2GO:0072589: box H/ACA scaRNP complex0.00E+00
3GO:0005832: chaperonin-containing T-complex0.00E+00
4GO:0043186: P granule0.00E+00
5GO:0005675: holo TFIIH complex0.00E+00
6GO:0005840: ribosome4.92E-140
7GO:0022626: cytosolic ribosome5.36E-127
8GO:0022625: cytosolic large ribosomal subunit2.14E-122
9GO:0022627: cytosolic small ribosomal subunit4.99E-81
10GO:0005829: cytosol2.64E-46
11GO:0005730: nucleolus1.88E-44
12GO:0005737: cytoplasm2.29E-40
13GO:0009506: plasmodesma4.69E-23
14GO:0015934: large ribosomal subunit5.65E-22
15GO:0005774: vacuolar membrane1.83E-17
16GO:0016020: membrane1.02E-13
17GO:0015935: small ribosomal subunit1.21E-12
18GO:0005773: vacuole1.35E-09
19GO:0009507: chloroplast1.72E-07
20GO:0005853: eukaryotic translation elongation factor 1 complex3.01E-07
21GO:0005618: cell wall7.34E-07
22GO:0000502: proteasome complex7.47E-07
23GO:0046930: pore complex2.36E-06
24GO:0005732: small nucleolar ribonucleoprotein complex4.08E-06
25GO:0019013: viral nucleocapsid2.01E-05
26GO:0005839: proteasome core complex7.55E-05
27GO:0005742: mitochondrial outer membrane translocase complex8.38E-05
28GO:0005886: plasma membrane1.42E-04
29GO:0015030: Cajal body1.45E-04
30GO:0005665: DNA-directed RNA polymerase II, core complex2.75E-04
31GO:0000419: DNA-directed RNA polymerase V complex5.22E-04
32GO:0030686: 90S preribosome6.91E-04
33GO:0005681: spliceosomal complex6.99E-04
34GO:0005741: mitochondrial outer membrane7.67E-04
35GO:0035145: exon-exon junction complex1.49E-03
36GO:0031415: NatA complex1.49E-03
37GO:0005697: telomerase holoenzyme complex1.49E-03
38GO:0005736: DNA-directed RNA polymerase I complex1.50E-03
39GO:0005685: U1 snRNP1.50E-03
40GO:0005666: DNA-directed RNA polymerase III complex1.78E-03
41GO:0071011: precatalytic spliceosome1.78E-03
42GO:0000418: DNA-directed RNA polymerase IV complex2.08E-03
43GO:0071013: catalytic step 2 spliceosome2.41E-03
44GO:0008541: proteasome regulatory particle, lid subcomplex2.41E-03
45GO:0000439: core TFIIH complex2.46E-03
46GO:0034719: SMN-Sm protein complex2.46E-03
47GO:0005750: mitochondrial respiratory chain complex III3.55E-03
48GO:0031429: box H/ACA snoRNP complex3.58E-03
49GO:0009331: glycerol-3-phosphate dehydrogenase complex3.58E-03
50GO:1990726: Lsm1-7-Pat1 complex3.58E-03
51GO:0005682: U5 snRNP4.83E-03
52GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)4.83E-03
53GO:0005758: mitochondrial intermembrane space4.94E-03
54GO:0097526: spliceosomal tri-snRNP complex6.21E-03
55GO:0005746: mitochondrial respiratory chain6.21E-03
56GO:0005687: U4 snRNP6.21E-03
57GO:0009536: plastid6.47E-03
58GO:0031428: box C/D snoRNP complex7.71E-03
59GO:0005689: U12-type spliceosomal complex9.33E-03
60GO:0005762: mitochondrial large ribosomal subunit9.33E-03
61GO:0005801: cis-Golgi network9.33E-03
62GO:0016272: prefoldin complex9.33E-03
63GO:0031359: integral component of chloroplast outer membrane1.11E-02
64GO:0005688: U6 snRNP1.29E-02
65GO:0071004: U2-type prespliceosome1.29E-02
66GO:0019773: proteasome core complex, alpha-subunit complex1.48E-02
67GO:0046540: U4/U6 x U5 tri-snRNP complex1.48E-02
68GO:0008180: COP9 signalosome1.69E-02
69GO:0030529: intracellular ribonucleoprotein complex1.79E-02
70GO:0005740: mitochondrial envelope2.12E-02
71GO:0005686: U2 snRNP2.12E-02
72GO:0005852: eukaryotic translation initiation factor 3 complex2.35E-02
73GO:0048471: perinuclear region of cytoplasm2.35E-02
74GO:0005654: nucleoplasm2.37E-02
75GO:0032040: small-subunit processome2.59E-02
76GO:0031307: integral component of mitochondrial outer membrane2.59E-02
77GO:0009508: plastid chromosome2.84E-02
78GO:0005753: mitochondrial proton-transporting ATP synthase complex3.36E-02
79GO:0070469: respiratory chain4.19E-02
80GO:0005743: mitochondrial inner membrane4.22E-02
81GO:0005622: intracellular4.53E-02
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Gene type



Gene DE type