co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G07320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0017038: protein import	0.00E+00
2	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
3	GO:0002184: cytoplasmic translational termination	0.00E+00
4	GO:0030155: regulation of cell adhesion	0.00E+00
5	GO:0061635: regulation of protein complex stability	0.00E+00
6	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
7	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
8	GO:0005996: monosaccharide metabolic process	0.00E+00
9	GO:0006114: glycerol biosynthetic process	0.00E+00
10	GO:0015979: photosynthesis	1.18E-13
11	GO:0010027: thylakoid membrane organization	4.80E-13
12	GO:0032544: plastid translation	4.80E-11
13	GO:0009773: photosynthetic electron transport in photosystem I	4.05E-10
14	GO:0009658: chloroplast organization	1.25E-08
15	GO:0006412: translation	1.56E-08
16	GO:0030388: fructose 1,6-bisphosphate metabolic process	9.18E-07
17	GO:0006000: fructose metabolic process	3.44E-06
18	GO:0009735: response to cytokinin	1.09E-05
19	GO:0010196: nonphotochemical quenching	7.02E-05
20	GO:0005978: glycogen biosynthetic process	9.09E-05
21	GO:0006002: fructose 6-phosphate metabolic process	1.14E-04
22	GO:0080093: regulation of photorespiration	1.35E-04
23	GO:0043007: maintenance of rDNA	1.35E-04
24	GO:0031998: regulation of fatty acid beta-oxidation	1.35E-04
25	GO:1902458: positive regulation of stomatal opening	1.35E-04
26	GO:0006438: valyl-tRNA aminoacylation	1.35E-04
27	GO:0010206: photosystem II repair	1.40E-04
28	GO:0015995: chlorophyll biosynthetic process	1.76E-04
29	GO:0009409: response to cold	2.39E-04
30	GO:0005983: starch catabolic process	2.70E-04
31	GO:0045037: protein import into chloroplast stroma	2.70E-04
32	GO:0006094: gluconeogenesis	3.08E-04
33	GO:0005986: sucrose biosynthetic process	3.08E-04
34	GO:0019388: galactose catabolic process	3.11E-04
35	GO:0018026: peptidyl-lysine monomethylation	3.11E-04
36	GO:1903426: regulation of reactive oxygen species biosynthetic process	3.11E-04
37	GO:0010207: photosystem II assembly	3.49E-04
38	GO:0006518: peptide metabolic process	5.13E-04
39	GO:0071492: cellular response to UV-A	5.13E-04
40	GO:0016050: vesicle organization	5.13E-04
41	GO:0048281: inflorescence morphogenesis	5.13E-04
42	GO:0042254: ribosome biogenesis	5.24E-04
43	GO:0061077: chaperone-mediated protein folding	5.84E-04
44	GO:0009590: detection of gravity	7.34E-04
45	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	7.34E-04
46	GO:0071484: cellular response to light intensity	7.34E-04
47	GO:0010148: transpiration	7.34E-04
48	GO:0006546: glycine catabolic process	9.73E-04
49	GO:0010021: amylopectin biosynthetic process	9.73E-04
50	GO:0010109: regulation of photosynthesis	9.73E-04
51	GO:0015976: carbon utilization	9.73E-04
52	GO:0071486: cellular response to high light intensity	9.73E-04
53	GO:0019464: glycine decarboxylation via glycine cleavage system	9.73E-04
54	GO:0006109: regulation of carbohydrate metabolic process	9.73E-04
55	GO:0045727: positive regulation of translation	9.73E-04
56	GO:0015994: chlorophyll metabolic process	9.73E-04
57	GO:0019252: starch biosynthetic process	1.08E-03
58	GO:0006810: transport	1.16E-03
59	GO:0045038: protein import into chloroplast thylakoid membrane	1.23E-03
60	GO:0006097: glyoxylate cycle	1.23E-03
61	GO:0006461: protein complex assembly	1.23E-03
62	GO:0009790: embryo development	1.43E-03
63	GO:0042793: transcription from plastid promoter	1.51E-03
64	GO:0010190: cytochrome b6f complex assembly	1.51E-03
65	GO:0042549: photosystem II stabilization	1.51E-03
66	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.51E-03
67	GO:0000470: maturation of LSU-rRNA	1.51E-03
68	GO:0009955: adaxial/abaxial pattern specification	1.81E-03
69	GO:1901259: chloroplast rRNA processing	1.81E-03
70	GO:0016311: dephosphorylation	2.03E-03
71	GO:0070370: cellular heat acclimation	2.12E-03
72	GO:0010103: stomatal complex morphogenesis	2.12E-03
73	GO:0006605: protein targeting	2.46E-03
74	GO:2000070: regulation of response to water deprivation	2.46E-03
75	GO:0001558: regulation of cell growth	2.81E-03
76	GO:0015996: chlorophyll catabolic process	2.81E-03
77	GO:0007186: G-protein coupled receptor signaling pathway	2.81E-03
78	GO:0009657: plastid organization	2.81E-03
79	GO:0009793: embryo development ending in seed dormancy	2.84E-03
80	GO:0005982: starch metabolic process	3.55E-03
81	GO:0010205: photoinhibition	3.55E-03
82	GO:0006779: porphyrin-containing compound biosynthetic process	3.55E-03
83	GO:0006782: protoporphyrinogen IX biosynthetic process	3.95E-03
84	GO:0009073: aromatic amino acid family biosynthetic process	4.36E-03
85	GO:0043085: positive regulation of catalytic activity	4.36E-03
86	GO:0000272: polysaccharide catabolic process	4.36E-03
87	GO:0009750: response to fructose	4.36E-03
88	GO:0018119: peptidyl-cysteine S-nitrosylation	4.36E-03
89	GO:0006415: translational termination	4.36E-03
90	GO:0006364: rRNA processing	4.66E-03
91	GO:0045454: cell redox homeostasis	5.04E-03
92	GO:0006108: malate metabolic process	5.22E-03
93	GO:0006006: glucose metabolic process	5.22E-03
94	GO:0019253: reductive pentose-phosphate cycle	5.68E-03
95	GO:0005985: sucrose metabolic process	6.14E-03
96	GO:0006636: unsaturated fatty acid biosynthetic process	6.62E-03
97	GO:0009944: polarity specification of adaxial/abaxial axis	7.11E-03
98	GO:0009768: photosynthesis, light harvesting in photosystem I	7.62E-03
99	GO:0051302: regulation of cell division	7.62E-03
100	GO:0006418: tRNA aminoacylation for protein translation	7.62E-03
101	GO:0042742: defense response to bacterium	8.80E-03
102	GO:0006979: response to oxidative stress	8.91E-03
103	GO:0001944: vasculature development	9.21E-03
104	GO:0009561: megagametogenesis	9.77E-03
105	GO:0042631: cellular response to water deprivation	1.09E-02
106	GO:0006662: glycerol ether metabolic process	1.15E-02
107	GO:0010182: sugar mediated signaling pathway	1.15E-02
108	GO:0009646: response to absence of light	1.21E-02
109	GO:0010090: trichome morphogenesis	1.46E-02
110	GO:0018298: protein-chromophore linkage	2.09E-02
111	GO:0009817: defense response to fungus, incompatible interaction	2.09E-02
112	GO:0009813: flavonoid biosynthetic process	2.17E-02
113	GO:0006499: N-terminal protein myristoylation	2.24E-02
114	GO:0010218: response to far red light	2.24E-02
115	GO:0009637: response to blue light	2.48E-02
116	GO:0034599: cellular response to oxidative stress	2.56E-02
117	GO:0006099: tricarboxylic acid cycle	2.56E-02
118	GO:0006631: fatty acid metabolic process	2.80E-02
119	GO:0010114: response to red light	2.97E-02
120	GO:0009644: response to high light intensity	3.14E-02
121	GO:0009965: leaf morphogenesis	3.23E-02
122	GO:0009664: plant-type cell wall organization	3.49E-02
123	GO:0006096: glycolytic process	4.13E-02
124	GO:0043086: negative regulation of catalytic activity	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0051738: xanthophyll binding	0.00E+00
2	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
3	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
4	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
5	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
6	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
7	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
8	GO:0019843: rRNA binding	7.05E-15
9	GO:0003735: structural constituent of ribosome	3.80E-09
10	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	9.18E-07
11	GO:0019203: carbohydrate phosphatase activity	1.35E-04
12	GO:0004832: valine-tRNA ligase activity	1.35E-04
13	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.35E-04
14	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.35E-04
15	GO:0050308: sugar-phosphatase activity	1.35E-04
16	GO:0045485: omega-6 fatty acid desaturase activity	1.35E-04
17	GO:0016168: chlorophyll binding	1.51E-04
18	GO:0031072: heat shock protein binding	3.08E-04
19	GO:0003844: 1,4-alpha-glucan branching enzyme activity	3.11E-04
20	GO:0004614: phosphoglucomutase activity	3.11E-04
21	GO:0047746: chlorophyllase activity	3.11E-04
22	GO:0010297: heteropolysaccharide binding	3.11E-04
23	GO:0008967: phosphoglycolate phosphatase activity	3.11E-04
24	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.79E-04
25	GO:0005528: FK506 binding	4.84E-04
26	GO:0005504: fatty acid binding	5.13E-04
27	GO:0015462: ATPase-coupled protein transmembrane transporter activity	5.13E-04
28	GO:0043169: cation binding	5.13E-04
29	GO:0022891: substrate-specific transmembrane transporter activity	6.94E-04
30	GO:0016149: translation release factor activity, codon specific	7.34E-04
31	GO:0043023: ribosomal large subunit binding	7.34E-04
32	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	7.34E-04
33	GO:0004375: glycine dehydrogenase (decarboxylating) activity	7.34E-04
34	GO:0016851: magnesium chelatase activity	7.34E-04
35	GO:0045430: chalcone isomerase activity	9.73E-04
36	GO:0042277: peptide binding	9.73E-04
37	GO:0016279: protein-lysine N-methyltransferase activity	9.73E-04
38	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	9.73E-04
39	GO:0019199: transmembrane receptor protein kinase activity	9.73E-04
40	GO:0004040: amidase activity	1.23E-03
41	GO:0016615: malate dehydrogenase activity	1.51E-03
42	GO:2001070: starch binding	1.51E-03
43	GO:0030060: L-malate dehydrogenase activity	1.81E-03
44	GO:0016787: hydrolase activity	2.44E-03
45	GO:0004033: aldo-keto reductase (NADP) activity	2.46E-03
46	GO:0000287: magnesium ion binding	2.98E-03
47	GO:0003747: translation release factor activity	3.17E-03
48	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	3.17E-03
49	GO:0008047: enzyme activator activity	3.95E-03
50	GO:0004089: carbonate dehydratase activity	5.22E-03
51	GO:0004565: beta-galactosidase activity	5.22E-03
52	GO:0051082: unfolded protein binding	6.62E-03
53	GO:0031409: pigment binding	6.62E-03
54	GO:0015035: protein disulfide oxidoreductase activity	6.82E-03
55	GO:0004857: enzyme inhibitor activity	7.11E-03
56	GO:0009055: electron carrier activity	7.20E-03
57	GO:0003756: protein disulfide isomerase activity	9.77E-03
58	GO:0047134: protein-disulfide reductase activity	1.03E-02
59	GO:0004812: aminoacyl-tRNA ligase activity	1.03E-02
60	GO:0050662: coenzyme binding	1.21E-02
61	GO:0004791: thioredoxin-disulfide reductase activity	1.21E-02
62	GO:0016491: oxidoreductase activity	1.33E-02
63	GO:0048038: quinone binding	1.34E-02
64	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.46E-02
65	GO:0008483: transaminase activity	1.60E-02
66	GO:0004222: metalloendopeptidase activity	2.24E-02
67	GO:0003746: translation elongation factor activity	2.48E-02
68	GO:0051537: 2 iron, 2 sulfur cluster binding	3.14E-02

Rank	GO Term	Adjusted P value
1	GO:0042579: microbody	0.00E+00
2	GO:0044391: ribosomal subunit	0.00E+00
3	GO:0009507: chloroplast	5.15E-59
4	GO:0009570: chloroplast stroma	3.74E-39
5	GO:0009941: chloroplast envelope	1.76E-34
6	GO:0009534: chloroplast thylakoid	7.73E-34
7	GO:0009535: chloroplast thylakoid membrane	1.05E-33
8	GO:0009579: thylakoid	6.15E-18
9	GO:0009543: chloroplast thylakoid lumen	1.46E-11
10	GO:0005840: ribosome	1.20E-09
11	GO:0010319: stromule	1.03E-07
12	GO:0030095: chloroplast photosystem II	1.47E-07
13	GO:0031977: thylakoid lumen	9.14E-07
14	GO:0000427: plastid-encoded plastid RNA polymerase complex	9.18E-07
15	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.29E-06
16	GO:0009706: chloroplast inner membrane	6.23E-06
17	GO:0009508: plastid chromosome	8.79E-06
18	GO:0009523: photosystem II	7.28E-05
19	GO:0009295: nucleoid	1.18E-04
20	GO:0010287: plastoglobule	1.34E-04
21	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.35E-04
22	GO:0009528: plastid inner membrane	5.13E-04
23	GO:0010007: magnesium chelatase complex	5.13E-04
24	GO:0042651: thylakoid membrane	5.33E-04
25	GO:0009654: photosystem II oxygen evolving complex	5.33E-04
26	GO:0009532: plastid stroma	5.84E-04
27	GO:0048046: apoplast	6.73E-04
28	GO:0005960: glycine cleavage complex	7.34E-04
29	GO:0009536: plastid	8.13E-04
30	GO:0009527: plastid outer membrane	9.73E-04
31	GO:0009517: PSII associated light-harvesting complex II	9.73E-04
32	GO:0019898: extrinsic component of membrane	1.08E-03
33	GO:0009840: chloroplastic endopeptidase Clp complex	1.81E-03
34	GO:0009533: chloroplast stromal thylakoid	2.12E-03
35	GO:0015934: large ribosomal subunit	2.46E-03
36	GO:0009501: amyloplast	2.46E-03
37	GO:0005763: mitochondrial small ribosomal subunit	3.17E-03
38	GO:0016020: membrane	4.88E-03
39	GO:0030076: light-harvesting complex	6.14E-03
40	GO:0015935: small ribosomal subunit	8.14E-03
41	GO:0009522: photosystem I	1.21E-02
42	GO:0009707: chloroplast outer membrane	2.09E-02
43	GO:0022625: cytosolic large ribosomal subunit	2.32E-02