Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035024: negative regulation of Rho protein signal transduction0.00E+00
2GO:0032953: regulation of (1->3)-beta-D-glucan biosynthetic process0.00E+00
3GO:0007141: male meiosis I0.00E+00
4GO:0071475: cellular hyperosmotic salinity response0.00E+00
5GO:0042344: indole glucosinolate catabolic process4.23E-06
6GO:0052544: defense response by callose deposition in cell wall7.18E-06
7GO:0009873: ethylene-activated signaling pathway7.94E-05
8GO:0009865: pollen tube adhesion1.52E-04
9GO:0046938: phytochelatin biosynthetic process1.52E-04
10GO:0006811: ion transport2.88E-04
11GO:0015709: thiosulfate transport3.47E-04
12GO:0071395: cellular response to jasmonic acid stimulus3.47E-04
13GO:0071422: succinate transmembrane transport3.47E-04
14GO:0031407: oxylipin metabolic process3.47E-04
15GO:0048569: post-embryonic animal organ development3.47E-04
16GO:0015908: fatty acid transport3.47E-04
17GO:0007130: synaptonemal complex assembly3.47E-04
18GO:0006898: receptor-mediated endocytosis3.47E-04
19GO:0071367: cellular response to brassinosteroid stimulus5.68E-04
20GO:0044210: 'de novo' CTP biosynthetic process5.68E-04
21GO:0016045: detection of bacterium5.68E-04
22GO:0010359: regulation of anion channel activity5.68E-04
23GO:0090630: activation of GTPase activity5.68E-04
24GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid5.68E-04
25GO:0071369: cellular response to ethylene stimulus8.07E-04
26GO:0071215: cellular response to abscisic acid stimulus8.07E-04
27GO:0071323: cellular response to chitin8.13E-04
28GO:0080024: indolebutyric acid metabolic process8.13E-04
29GO:0010371: regulation of gibberellin biosynthetic process8.13E-04
30GO:1901000: regulation of response to salt stress8.13E-04
31GO:0070301: cellular response to hydrogen peroxide8.13E-04
32GO:0015729: oxaloacetate transport8.13E-04
33GO:0030100: regulation of endocytosis8.13E-04
34GO:0010104: regulation of ethylene-activated signaling pathway8.13E-04
35GO:0015700: arsenite transport8.13E-04
36GO:0042991: transcription factor import into nucleus1.08E-03
37GO:0046345: abscisic acid catabolic process1.08E-03
38GO:0051365: cellular response to potassium ion starvation1.08E-03
39GO:0022622: root system development1.08E-03
40GO:0006873: cellular ion homeostasis1.36E-03
41GO:0048497: maintenance of floral organ identity1.36E-03
42GO:0006461: protein complex assembly1.36E-03
43GO:0051225: spindle assembly1.36E-03
44GO:0071423: malate transmembrane transport1.36E-03
45GO:0009823: cytokinin catabolic process1.36E-03
46GO:0006656: phosphatidylcholine biosynthetic process1.36E-03
47GO:0019760: glucosinolate metabolic process1.61E-03
48GO:0047484: regulation of response to osmotic stress1.67E-03
49GO:0009117: nucleotide metabolic process1.67E-03
50GO:0048232: male gamete generation1.67E-03
51GO:0035435: phosphate ion transmembrane transport1.67E-03
52GO:0010016: shoot system morphogenesis2.01E-03
53GO:0080086: stamen filament development2.01E-03
54GO:0071470: cellular response to osmotic stress2.01E-03
55GO:1901001: negative regulation of response to salt stress2.01E-03
56GO:0010103: stomatal complex morphogenesis2.36E-03
57GO:0032880: regulation of protein localization2.36E-03
58GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.36E-03
59GO:0008272: sulfate transport2.36E-03
60GO:0009817: defense response to fungus, incompatible interaction2.49E-03
61GO:0006470: protein dephosphorylation2.55E-03
62GO:0009617: response to bacterium2.69E-03
63GO:0009690: cytokinin metabolic process2.73E-03
64GO:2000070: regulation of response to water deprivation2.73E-03
65GO:0009061: anaerobic respiration2.73E-03
66GO:0001558: regulation of cell growth3.12E-03
67GO:0046685: response to arsenic-containing substance3.53E-03
68GO:0006098: pentose-phosphate shunt3.53E-03
69GO:0006631: fatty acid metabolic process3.74E-03
70GO:0042761: very long-chain fatty acid biosynthetic process3.96E-03
71GO:0007346: regulation of mitotic cell cycle3.96E-03
72GO:0009638: phototropism3.96E-03
73GO:0048268: clathrin coat assembly3.96E-03
74GO:0051026: chiasma assembly4.40E-03
75GO:0048229: gametophyte development4.86E-03
76GO:0009682: induced systemic resistance4.86E-03
77GO:0010200: response to chitin5.13E-03
78GO:0010105: negative regulation of ethylene-activated signaling pathway5.34E-03
79GO:0050826: response to freezing5.83E-03
80GO:2000012: regulation of auxin polar transport5.83E-03
81GO:0006468: protein phosphorylation5.94E-03
82GO:0045892: negative regulation of transcription, DNA-templated6.30E-03
83GO:0048467: gynoecium development6.33E-03
84GO:0070588: calcium ion transmembrane transport6.86E-03
85GO:0010025: wax biosynthetic process7.40E-03
86GO:0009751: response to salicylic acid7.91E-03
87GO:0051302: regulation of cell division8.51E-03
88GO:0031408: oxylipin biosynthetic process9.10E-03
89GO:0051321: meiotic cell cycle9.10E-03
90GO:0007131: reciprocal meiotic recombination9.69E-03
91GO:0006351: transcription, DNA-templated9.94E-03
92GO:0006355: regulation of transcription, DNA-templated1.01E-02
93GO:0009058: biosynthetic process1.03E-02
94GO:0001944: vasculature development1.03E-02
95GO:0010584: pollen exine formation1.09E-02
96GO:0042742: defense response to bacterium1.12E-02
97GO:0009790: embryo development1.14E-02
98GO:0008284: positive regulation of cell proliferation1.16E-02
99GO:0042631: cellular response to water deprivation1.22E-02
100GO:0009958: positive gravitropism1.29E-02
101GO:0048868: pollen tube development1.29E-02
102GO:0010268: brassinosteroid homeostasis1.29E-02
103GO:0010154: fruit development1.29E-02
104GO:0009646: response to absence of light1.36E-02
105GO:0048825: cotyledon development1.42E-02
106GO:0016132: brassinosteroid biosynthetic process1.50E-02
107GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.50E-02
108GO:0007166: cell surface receptor signaling pathway1.54E-02
109GO:0009630: gravitropism1.57E-02
110GO:0010468: regulation of gene expression1.61E-02
111GO:0009639: response to red or far red light1.71E-02
112GO:0006310: DNA recombination1.71E-02
113GO:0016125: sterol metabolic process1.71E-02
114GO:0009611: response to wounding1.72E-02
115GO:0001666: response to hypoxia1.94E-02
116GO:0009911: positive regulation of flower development1.94E-02
117GO:0010029: regulation of seed germination2.02E-02
118GO:0009816: defense response to bacterium, incompatible interaction2.02E-02
119GO:0016049: cell growth2.26E-02
120GO:0048481: plant ovule development2.34E-02
121GO:0080167: response to karrikin2.59E-02
122GO:0048527: lateral root development2.60E-02
123GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.68E-02
124GO:0009637: response to blue light2.78E-02
125GO:0006839: mitochondrial transport3.05E-02
126GO:0006897: endocytosis3.14E-02
127GO:0009640: photomorphogenesis3.32E-02
128GO:0006260: DNA replication3.81E-02
129GO:0000165: MAPK cascade3.81E-02
130GO:0009846: pollen germination3.91E-02
131GO:0071555: cell wall organization4.03E-02
132GO:0006979: response to oxidative stress4.07E-02
133GO:0009736: cytokinin-activated signaling pathway4.11E-02
134GO:0016310: phosphorylation4.23E-02
135GO:0043086: negative regulation of catalytic activity4.63E-02
136GO:0048367: shoot system development4.73E-02
RankGO TermAdjusted P value
1GO:0017048: Rho GTPase binding0.00E+00
2GO:0003883: CTP synthase activity9.86E-06
3GO:0052638: indole-3-butyrate beta-glucosyltransferase activity1.52E-04
4GO:0071992: phytochelatin transmembrane transporter activity1.52E-04
5GO:0004105: choline-phosphate cytidylyltransferase activity1.52E-04
6GO:0046870: cadmium ion binding1.52E-04
7GO:0015446: ATPase-coupled arsenite transmembrane transporter activity1.52E-04
8GO:1901677: phosphate transmembrane transporter activity3.47E-04
9GO:0004385: guanylate kinase activity3.47E-04
10GO:0016629: 12-oxophytodienoate reductase activity3.47E-04
11GO:0017022: myosin binding3.47E-04
12GO:0015117: thiosulfate transmembrane transporter activity3.47E-04
13GO:0010295: (+)-abscisic acid 8'-hydroxylase activity5.68E-04
14GO:0005310: dicarboxylic acid transmembrane transporter activity5.68E-04
15GO:0015141: succinate transmembrane transporter activity5.68E-04
16GO:0043565: sequence-specific DNA binding7.51E-04
17GO:0015131: oxaloacetate transmembrane transporter activity8.13E-04
18GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity8.13E-04
19GO:0000062: fatty-acyl-CoA binding1.08E-03
20GO:0051011: microtubule minus-end binding1.36E-03
21GO:0019139: cytokinin dehydrogenase activity1.36E-03
22GO:0019137: thioglucosidase activity1.67E-03
23GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.97E-03
24GO:0015140: malate transmembrane transporter activity2.36E-03
25GO:0016209: antioxidant activity2.73E-03
26GO:0008308: voltage-gated anion channel activity3.12E-03
27GO:0005545: 1-phosphatidylinositol binding4.40E-03
28GO:0004713: protein tyrosine kinase activity4.40E-03
29GO:0015116: sulfate transmembrane transporter activity5.34E-03
30GO:0005262: calcium channel activity5.83E-03
31GO:0008083: growth factor activity6.33E-03
32GO:0042973: glucan endo-1,3-beta-D-glucosidase activity6.33E-03
33GO:0016301: kinase activity6.49E-03
34GO:0004722: protein serine/threonine phosphatase activity6.94E-03
35GO:0016874: ligase activity7.31E-03
36GO:0035251: UDP-glucosyltransferase activity9.10E-03
37GO:0004707: MAP kinase activity9.10E-03
38GO:0003700: transcription factor activity, sequence-specific DNA binding9.14E-03
39GO:0044212: transcription regulatory region DNA binding1.12E-02
40GO:0030276: clathrin binding1.29E-02
41GO:0010181: FMN binding1.36E-02
42GO:0016597: amino acid binding1.86E-02
43GO:0102483: scopolin beta-glucosidase activity2.18E-02
44GO:0005096: GTPase activator activity2.43E-02
45GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.51E-02
46GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.60E-02
47GO:0003677: DNA binding2.91E-02
48GO:0008422: beta-glucosidase activity2.95E-02
49GO:0035091: phosphatidylinositol binding3.52E-02
50GO:0008234: cysteine-type peptidase activity4.42E-02
51GO:0045330: aspartyl esterase activity4.42E-02
52GO:0004674: protein serine/threonine kinase activity4.50E-02
53GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.73E-02
54GO:0080043: quercetin 3-O-glucosyltransferase activity4.95E-02
55GO:0080044: quercetin 7-O-glucosyltransferase activity4.95E-02
RankGO TermAdjusted P value
1GO:0070382: exocytic vesicle1.52E-04
2GO:0030133: transport vesicle3.47E-04
3GO:0070652: HAUS complex5.68E-04
4GO:0045177: apical part of cell8.13E-04
5GO:0005798: Golgi-associated vesicle1.67E-03
6GO:0000793: condensed chromosome1.67E-03
7GO:0000794: condensed nuclear chromosome2.36E-03
8GO:0005615: extracellular space2.48E-03
9GO:0016604: nuclear body3.96E-03
10GO:0005876: spindle microtubule3.96E-03
11GO:0005938: cell cortex5.83E-03
12GO:0005769: early endosome7.40E-03
13GO:0005905: clathrin-coated pit9.10E-03
14GO:0005618: cell wall1.11E-02
15GO:0030136: clathrin-coated vesicle1.16E-02
16GO:0000790: nuclear chromatin1.16E-02
17GO:0090406: pollen tube3.32E-02
18GO:0005743: mitochondrial inner membrane3.55E-02
19GO:0005681: spliceosomal complex4.63E-02
20GO:0016607: nuclear speck4.73E-02
21GO:0010008: endosome membrane4.73E-02
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Gene type



Gene DE type