co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G07000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080050: regulation of seed development	0.00E+00
2	GO:0042353: fucose biosynthetic process	0.00E+00
3	GO:0034775: glutathione transmembrane transport	0.00E+00
4	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
5	GO:0032497: detection of lipopolysaccharide	0.00E+00
6	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
7	GO:0035420: MAPK cascade involved in innate immune response	0.00E+00
8	GO:0032499: detection of peptidoglycan	0.00E+00
9	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
10	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
11	GO:0010200: response to chitin	1.74E-08
12	GO:0006468: protein phosphorylation	3.27E-08
13	GO:0006955: immune response	1.87E-06
14	GO:0048544: recognition of pollen	6.19E-06
15	GO:0042742: defense response to bacterium	1.57E-05
16	GO:0071323: cellular response to chitin	1.60E-05
17	GO:0010337: regulation of salicylic acid metabolic process	6.98E-05
18	GO:0006751: glutathione catabolic process	6.98E-05
19	GO:0006952: defense response	9.44E-05
20	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	9.69E-05
21	GO:0007166: cell surface receptor signaling pathway	1.08E-04
22	GO:1900150: regulation of defense response to fungus	1.64E-04
23	GO:0046938: phytochelatin biosynthetic process	2.00E-04
24	GO:0051180: vitamin transport	2.00E-04
25	GO:0030974: thiamine pyrophosphate transport	2.00E-04
26	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	2.00E-04
27	GO:0050691: regulation of defense response to virus by host	2.00E-04
28	GO:0032491: detection of molecule of fungal origin	2.00E-04
29	GO:0008219: cell death	4.18E-04
30	GO:0015893: drug transport	4.48E-04
31	GO:0052542: defense response by callose deposition	4.48E-04
32	GO:2000071: regulation of defense response by callose deposition	4.48E-04
33	GO:0002221: pattern recognition receptor signaling pathway	4.48E-04
34	GO:0046740: transport of virus in host, cell to cell	4.48E-04
35	GO:0008616: queuosine biosynthetic process	4.48E-04
36	GO:0007000: nucleolus organization	4.48E-04
37	GO:0045087: innate immune response	5.66E-04
38	GO:0070588: calcium ion transmembrane transport	6.61E-04
39	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.29E-04
40	GO:0051211: anisotropic cell growth	7.29E-04
41	GO:0042344: indole glucosinolate catabolic process	7.29E-04
42	GO:0000280: nuclear division	7.29E-04
43	GO:0045793: positive regulation of cell size	7.29E-04
44	GO:0009863: salicylic acid mediated signaling pathway	8.13E-04
45	GO:0030100: regulation of endocytosis	1.04E-03
46	GO:0015700: arsenite transport	1.04E-03
47	GO:0033014: tetrapyrrole biosynthetic process	1.04E-03
48	GO:0002679: respiratory burst involved in defense response	1.04E-03
49	GO:0015696: ammonium transport	1.04E-03
50	GO:0010071: root meristem specification	1.04E-03
51	GO:0034219: carbohydrate transmembrane transport	1.04E-03
52	GO:0042147: retrograde transport, endosome to Golgi	1.36E-03
53	GO:0045727: positive regulation of translation	1.38E-03
54	GO:0072488: ammonium transmembrane transport	1.38E-03
55	GO:0034440: lipid oxidation	1.38E-03
56	GO:0071219: cellular response to molecule of bacterial origin	1.38E-03
57	GO:0042991: transcription factor import into nucleus	1.38E-03
58	GO:1902347: response to strigolactone	1.38E-03
59	GO:0080142: regulation of salicylic acid biosynthetic process	1.38E-03
60	GO:0046345: abscisic acid catabolic process	1.38E-03
61	GO:0009611: response to wounding	1.75E-03
62	GO:0009164: nucleoside catabolic process	1.76E-03
63	GO:0009823: cytokinin catabolic process	1.76E-03
64	GO:0045038: protein import into chloroplast thylakoid membrane	1.76E-03
65	GO:0046777: protein autophosphorylation	1.77E-03
66	GO:0035556: intracellular signal transduction	1.85E-03
67	GO:0009742: brassinosteroid mediated signaling pathway	1.89E-03
68	GO:0010193: response to ozone	1.95E-03
69	GO:0006891: intra-Golgi vesicle-mediated transport	1.95E-03
70	GO:0047484: regulation of response to osmotic stress	2.17E-03
71	GO:0010256: endomembrane system organization	2.17E-03
72	GO:0006904: vesicle docking involved in exocytosis	2.50E-03
73	GO:1901001: negative regulation of response to salt stress	2.60E-03
74	GO:0080113: regulation of seed growth	2.60E-03
75	GO:0010555: response to mannitol	2.60E-03
76	GO:0080086: stamen filament development	2.60E-03
77	GO:2000067: regulation of root morphogenesis	2.60E-03
78	GO:0009816: defense response to bacterium, incompatible interaction	2.96E-03
79	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.06E-03
80	GO:0010161: red light signaling pathway	3.06E-03
81	GO:0009690: cytokinin metabolic process	3.55E-03
82	GO:0010078: maintenance of root meristem identity	3.55E-03
83	GO:0045010: actin nucleation	3.55E-03
84	GO:0010492: maintenance of shoot apical meristem identity	3.55E-03
85	GO:0007186: G-protein coupled receptor signaling pathway	4.06E-03
86	GO:0009932: cell tip growth	4.06E-03
87	GO:0006470: protein dephosphorylation	4.15E-03
88	GO:0009617: response to bacterium	4.38E-03
89	GO:0051865: protein autoubiquitination	4.60E-03
90	GO:0006783: heme biosynthetic process	4.60E-03
91	GO:0098656: anion transmembrane transport	4.60E-03
92	GO:0046685: response to arsenic-containing substance	4.60E-03
93	GO:0006779: porphyrin-containing compound biosynthetic process	5.15E-03
94	GO:0010018: far-red light signaling pathway	5.15E-03
95	GO:0006887: exocytosis	5.48E-03
96	GO:0006782: protoporphyrinogen IX biosynthetic process	5.74E-03
97	GO:0019538: protein metabolic process	5.74E-03
98	GO:0051707: response to other organism	5.94E-03
99	GO:0052544: defense response by callose deposition in cell wall	6.34E-03
100	GO:0009750: response to fructose	6.34E-03
101	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.96E-03
102	GO:0031347: regulation of defense response	7.20E-03
103	GO:0048366: leaf development	7.50E-03
104	GO:0055046: microgametogenesis	7.61E-03
105	GO:0048467: gynoecium development	8.28E-03
106	GO:0002237: response to molecule of bacterial origin	8.28E-03
107	GO:0080188: RNA-directed DNA methylation	8.97E-03
108	GO:0009901: anther dehiscence	8.97E-03
109	GO:0046854: phosphatidylinositol phosphorylation	8.97E-03
110	GO:0009969: xyloglucan biosynthetic process	8.97E-03
111	GO:0042753: positive regulation of circadian rhythm	9.68E-03
112	GO:0009626: plant-type hypersensitive response	1.01E-02
113	GO:0043622: cortical microtubule organization	1.12E-02
114	GO:0009695: jasmonic acid biosynthetic process	1.12E-02
115	GO:0009624: response to nematode	1.14E-02
116	GO:0031408: oxylipin biosynthetic process	1.19E-02
117	GO:0016998: cell wall macromolecule catabolic process	1.19E-02
118	GO:0046686: response to cadmium ion	1.25E-02
119	GO:0010017: red or far-red light signaling pathway	1.27E-02
120	GO:0035428: hexose transmembrane transport	1.27E-02
121	GO:0030433: ubiquitin-dependent ERAD pathway	1.27E-02
122	GO:0040007: growth	1.35E-02
123	GO:0006817: phosphate ion transport	1.43E-02
124	GO:0010089: xylem development	1.43E-02
125	GO:0010214: seed coat development	1.43E-02
126	GO:0042391: regulation of membrane potential	1.60E-02
127	GO:0080022: primary root development	1.60E-02
128	GO:0048653: anther development	1.60E-02
129	GO:0009960: endosperm development	1.69E-02
130	GO:0046323: glucose import	1.69E-02
131	GO:0009749: response to glucose	1.87E-02
132	GO:0002229: defense response to oomycetes	1.97E-02
133	GO:0006979: response to oxidative stress	2.03E-02
134	GO:0009737: response to abscisic acid	2.14E-02
135	GO:0009639: response to red or far red light	2.25E-02
136	GO:0010468: regulation of gene expression	2.37E-02
137	GO:0000910: cytokinesis	2.45E-02
138	GO:0001666: response to hypoxia	2.55E-02
139	GO:0009555: pollen development	2.71E-02
140	GO:0016310: phosphorylation	2.71E-02
141	GO:0015995: chlorophyll biosynthetic process	2.87E-02
142	GO:0006950: response to stress	2.87E-02
143	GO:0016049: cell growth	2.98E-02
144	GO:0009817: defense response to fungus, incompatible interaction	3.09E-02
145	GO:0048481: plant ovule development	3.09E-02
146	GO:0009409: response to cold	3.13E-02
147	GO:0009813: flavonoid biosynthetic process	3.20E-02
148	GO:0006970: response to osmotic stress	3.30E-02
149	GO:0006499: N-terminal protein myristoylation	3.31E-02
150	GO:0009637: response to blue light	3.65E-02
151	GO:0006839: mitochondrial transport	4.01E-02
152	GO:0006897: endocytosis	4.13E-02
153	GO:0009744: response to sucrose	4.37E-02
154	GO:0009651: response to salt stress	4.53E-02
155	GO:0045454: cell redox homeostasis	4.54E-02
156	GO:0008643: carbohydrate transport	4.62E-02
157	GO:0006855: drug transmembrane transport	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005522: profilin binding	0.00E+00
2	GO:2001080: chitosan binding	0.00E+00
3	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
4	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
5	GO:0016301: kinase activity	1.29E-08
6	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.00E-08
7	GO:0005524: ATP binding	1.08E-06
8	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.61E-06
9	GO:0003840: gamma-glutamyltransferase activity	6.94E-06
10	GO:0036374: glutathione hydrolase activity	6.94E-06
11	GO:0004674: protein serine/threonine kinase activity	1.31E-05
12	GO:0090422: thiamine pyrophosphate transporter activity	2.00E-04
13	GO:0015085: calcium ion transmembrane transporter activity	2.00E-04
14	GO:0046870: cadmium ion binding	2.00E-04
15	GO:0015446: ATPase-coupled arsenite transmembrane transporter activity	2.00E-04
16	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.00E-04
17	GO:0071992: phytochelatin transmembrane transporter activity	2.00E-04
18	GO:0005516: calmodulin binding	2.12E-04
19	GO:0004672: protein kinase activity	2.78E-04
20	GO:0008479: queuine tRNA-ribosyltransferase activity	4.48E-04
21	GO:0004103: choline kinase activity	4.48E-04
22	GO:0008883: glutamyl-tRNA reductase activity	4.48E-04
23	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.04E-04
24	GO:0005388: calcium-transporting ATPase activity	5.25E-04
25	GO:0019888: protein phosphatase regulator activity	5.25E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	7.29E-04
27	GO:0004383: guanylate cyclase activity	7.29E-04
28	GO:0016165: linoleate 13S-lipoxygenase activity	7.29E-04
29	GO:0001664: G-protein coupled receptor binding	7.29E-04
30	GO:0001653: peptide receptor activity	1.04E-03
31	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	1.04E-03
32	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.04E-03
33	GO:0048487: beta-tubulin binding	1.04E-03
34	GO:0008514: organic anion transmembrane transporter activity	1.26E-03
35	GO:0019199: transmembrane receptor protein kinase activity	1.38E-03
36	GO:0019139: cytokinin dehydrogenase activity	1.76E-03
37	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.76E-03
38	GO:0047631: ADP-ribose diphosphatase activity	1.76E-03
39	GO:0045431: flavonol synthase activity	1.76E-03
40	GO:0010294: abscisic acid glucosyltransferase activity	1.76E-03
41	GO:0000210: NAD+ diphosphatase activity	2.17E-03
42	GO:0008519: ammonium transmembrane transporter activity	2.17E-03
43	GO:0004709: MAP kinase kinase kinase activity	2.17E-03
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.50E-03
45	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.60E-03
46	GO:0051020: GTPase binding	2.60E-03
47	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.06E-03
48	GO:0008143: poly(A) binding	3.06E-03
49	GO:0004143: diacylglycerol kinase activity	3.06E-03
50	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.06E-03
51	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.55E-03
52	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.55E-03
53	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.06E-03
54	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.06E-03
55	GO:0003951: NAD+ kinase activity	4.06E-03
56	GO:0004630: phospholipase D activity	4.06E-03
57	GO:0004713: protein tyrosine kinase activity	5.74E-03
58	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.74E-03
59	GO:0050660: flavin adenine dinucleotide binding	7.34E-03
60	GO:0005315: inorganic phosphate transmembrane transporter activity	7.61E-03
61	GO:0008131: primary amine oxidase activity	8.28E-03
62	GO:0031625: ubiquitin protein ligase binding	8.87E-03
63	GO:0051119: sugar transmembrane transporter activity	8.97E-03
64	GO:0008061: chitin binding	8.97E-03
65	GO:0030552: cAMP binding	8.97E-03
66	GO:0030553: cGMP binding	8.97E-03
67	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.04E-02
68	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.04E-02
69	GO:0030246: carbohydrate binding	1.09E-02
70	GO:0005515: protein binding	1.09E-02
71	GO:0003779: actin binding	1.11E-02
72	GO:0005216: ion channel activity	1.12E-02
73	GO:0004722: protein serine/threonine phosphatase activity	1.13E-02
74	GO:0035251: UDP-glucosyltransferase activity	1.19E-02
75	GO:0033612: receptor serine/threonine kinase binding	1.19E-02
76	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.19E-02
77	GO:0009055: electron carrier activity	1.44E-02
78	GO:0030551: cyclic nucleotide binding	1.60E-02
79	GO:0005249: voltage-gated potassium channel activity	1.60E-02
80	GO:0015144: carbohydrate transmembrane transporter activity	1.72E-02
81	GO:0005355: glucose transmembrane transporter activity	1.78E-02
82	GO:0005351: sugar:proton symporter activity	1.94E-02
83	GO:0051015: actin filament binding	2.16E-02
84	GO:0008194: UDP-glycosyltransferase activity	2.22E-02
85	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.76E-02
86	GO:0004806: triglyceride lipase activity	2.87E-02
87	GO:0004721: phosphoprotein phosphatase activity	2.87E-02
88	GO:0004683: calmodulin-dependent protein kinase activity	2.87E-02
89	GO:0046982: protein heterodimerization activity	3.01E-02
90	GO:0015238: drug transmembrane transporter activity	3.20E-02
91	GO:0043531: ADP binding	3.36E-02
92	GO:0046872: metal ion binding	3.54E-02
93	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.89E-02
94	GO:0050661: NADP binding	4.01E-02
95	GO:0035091: phosphatidylinositol binding	4.62E-02
96	GO:0004871: signal transducer activity	4.75E-02
97	GO:0042803: protein homodimerization activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0045335: phagocytic vesicle	0.00E+00
2	GO:0005886: plasma membrane	4.85E-08
3	GO:0005911: cell-cell junction	2.00E-04
4	GO:0000159: protein phosphatase type 2A complex	4.04E-04
5	GO:0080085: signal recognition particle, chloroplast targeting	4.48E-04
6	GO:0070062: extracellular exosome	1.04E-03
7	GO:0010008: endosome membrane	1.44E-03
8	GO:0000145: exocyst	2.08E-03
9	GO:0030173: integral component of Golgi membrane	2.60E-03
10	GO:0010494: cytoplasmic stress granule	4.60E-03
11	GO:0015030: Cajal body	5.15E-03
12	GO:0005795: Golgi stack	8.97E-03
13	GO:0043234: protein complex	9.68E-03
14	GO:0043231: intracellular membrane-bounded organelle	1.49E-02
15	GO:0030136: clathrin-coated vesicle	1.52E-02
16	GO:0005768: endosome	1.71E-02
17	GO:0005887: integral component of plasma membrane	1.94E-02
18	GO:0032580: Golgi cisterna membrane	2.25E-02
19	GO:0005778: peroxisomal membrane	2.35E-02
20	GO:0005737: cytoplasm	2.84E-02
21	GO:0016021: integral component of membrane	3.03E-02
22	GO:0031902: late endosome membrane	4.13E-02