GO Enrichment Analysis of Co-expressed Genes with
AT1G04940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0042371: vitamin K biosynthetic process | 9.33E-05 |
| 4 | GO:0071454: cellular response to anoxia | 9.33E-05 |
| 5 | GO:1902458: positive regulation of stomatal opening | 9.33E-05 |
| 6 | GO:0009098: leucine biosynthetic process | 9.72E-05 |
| 7 | GO:0009767: photosynthetic electron transport chain | 1.83E-04 |
| 8 | GO:0009744: response to sucrose | 2.00E-04 |
| 9 | GO:0019253: reductive pentose-phosphate cycle | 2.08E-04 |
| 10 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 2.20E-04 |
| 11 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.20E-04 |
| 12 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 2.20E-04 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.20E-04 |
| 14 | GO:2000030: regulation of response to red or far red light | 2.20E-04 |
| 15 | GO:0009306: protein secretion | 4.62E-04 |
| 16 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 5.28E-04 |
| 17 | GO:0033014: tetrapyrrole biosynthetic process | 5.28E-04 |
| 18 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.28E-04 |
| 19 | GO:0090307: mitotic spindle assembly | 5.28E-04 |
| 20 | GO:0031122: cytoplasmic microtubule organization | 7.02E-04 |
| 21 | GO:0006221: pyrimidine nucleotide biosynthetic process | 7.02E-04 |
| 22 | GO:0045038: protein import into chloroplast thylakoid membrane | 8.88E-04 |
| 23 | GO:0016123: xanthophyll biosynthetic process | 8.88E-04 |
| 24 | GO:0009643: photosynthetic acclimation | 1.08E-03 |
| 25 | GO:0017148: negative regulation of translation | 1.29E-03 |
| 26 | GO:0015977: carbon fixation | 1.29E-03 |
| 27 | GO:0009772: photosynthetic electron transport in photosystem II | 1.51E-03 |
| 28 | GO:0042255: ribosome assembly | 1.75E-03 |
| 29 | GO:0006353: DNA-templated transcription, termination | 1.75E-03 |
| 30 | GO:2000070: regulation of response to water deprivation | 1.75E-03 |
| 31 | GO:0048564: photosystem I assembly | 1.75E-03 |
| 32 | GO:0009657: plastid organization | 2.00E-03 |
| 33 | GO:0022900: electron transport chain | 2.00E-03 |
| 34 | GO:0006783: heme biosynthetic process | 2.25E-03 |
| 35 | GO:0000373: Group II intron splicing | 2.25E-03 |
| 36 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.52E-03 |
| 37 | GO:0045036: protein targeting to chloroplast | 2.80E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 3.09E-03 |
| 39 | GO:0009725: response to hormone | 3.69E-03 |
| 40 | GO:0010207: photosystem II assembly | 4.01E-03 |
| 41 | GO:0034605: cellular response to heat | 4.01E-03 |
| 42 | GO:0006863: purine nucleobase transport | 4.67E-03 |
| 43 | GO:0007017: microtubule-based process | 5.36E-03 |
| 44 | GO:0080092: regulation of pollen tube growth | 6.09E-03 |
| 45 | GO:0009735: response to cytokinin | 6.36E-03 |
| 46 | GO:0009416: response to light stimulus | 7.13E-03 |
| 47 | GO:0006810: transport | 7.24E-03 |
| 48 | GO:0070417: cellular response to cold | 7.25E-03 |
| 49 | GO:0008033: tRNA processing | 7.65E-03 |
| 50 | GO:0006662: glycerol ether metabolic process | 8.06E-03 |
| 51 | GO:0015986: ATP synthesis coupled proton transport | 8.47E-03 |
| 52 | GO:0009791: post-embryonic development | 8.90E-03 |
| 53 | GO:0010193: response to ozone | 9.33E-03 |
| 54 | GO:0016032: viral process | 9.78E-03 |
| 55 | GO:0019761: glucosinolate biosynthetic process | 9.78E-03 |
| 56 | GO:0032502: developmental process | 9.78E-03 |
| 57 | GO:0009658: chloroplast organization | 1.07E-02 |
| 58 | GO:0016126: sterol biosynthetic process | 1.21E-02 |
| 59 | GO:0009816: defense response to bacterium, incompatible interaction | 1.26E-02 |
| 60 | GO:0009407: toxin catabolic process | 1.56E-02 |
| 61 | GO:0010218: response to far red light | 1.56E-02 |
| 62 | GO:0045454: cell redox homeostasis | 1.59E-02 |
| 63 | GO:0009637: response to blue light | 1.73E-02 |
| 64 | GO:0009853: photorespiration | 1.73E-02 |
| 65 | GO:0034599: cellular response to oxidative stress | 1.78E-02 |
| 66 | GO:0010114: response to red light | 2.07E-02 |
| 67 | GO:0008152: metabolic process | 2.16E-02 |
| 68 | GO:0009636: response to toxic substance | 2.24E-02 |
| 69 | GO:0015031: protein transport | 2.36E-02 |
| 70 | GO:0006812: cation transport | 2.43E-02 |
| 71 | GO:0009409: response to cold | 2.55E-02 |
| 72 | GO:0008150: biological_process | 2.56E-02 |
| 73 | GO:0010224: response to UV-B | 2.62E-02 |
| 74 | GO:0055114: oxidation-reduction process | 2.87E-02 |
| 75 | GO:0006457: protein folding | 4.48E-02 |
| 76 | GO:0040008: regulation of growth | 4.69E-02 |
| 77 | GO:0010228: vegetative to reproductive phase transition of meristem | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 4.63E-07 |
| 4 | GO:0004325: ferrochelatase activity | 9.33E-05 |
| 5 | GO:0030941: chloroplast targeting sequence binding | 9.33E-05 |
| 6 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.20E-04 |
| 7 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.22E-04 |
| 8 | GO:0004848: ureidoglycolate hydrolase activity | 3.67E-04 |
| 9 | GO:0043023: ribosomal large subunit binding | 5.28E-04 |
| 10 | GO:0016984: ribulose-bisphosphate carboxylase activity | 5.28E-04 |
| 11 | GO:0000254: C-4 methylsterol oxidase activity | 5.28E-04 |
| 12 | GO:0009041: uridylate kinase activity | 5.28E-04 |
| 13 | GO:0009055: electron carrier activity | 6.54E-04 |
| 14 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 7.02E-04 |
| 15 | GO:0051861: glycolipid binding | 7.02E-04 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.02E-04 |
| 17 | GO:0043015: gamma-tubulin binding | 7.02E-04 |
| 18 | GO:0048038: quinone binding | 7.11E-04 |
| 19 | GO:0051011: microtubule minus-end binding | 8.88E-04 |
| 20 | GO:0015631: tubulin binding | 1.29E-03 |
| 21 | GO:0019899: enzyme binding | 1.51E-03 |
| 22 | GO:0051287: NAD binding | 2.54E-03 |
| 23 | GO:0003690: double-stranded DNA binding | 2.91E-03 |
| 24 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.09E-03 |
| 25 | GO:0015035: protein disulfide oxidoreductase activity | 4.11E-03 |
| 26 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.36E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 6.85E-03 |
| 28 | GO:0047134: protein-disulfide reductase activity | 7.25E-03 |
| 29 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.06E-03 |
| 30 | GO:0004791: thioredoxin-disulfide reductase activity | 8.47E-03 |
| 31 | GO:0004872: receptor activity | 8.90E-03 |
| 32 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.02E-02 |
| 33 | GO:0000287: magnesium ion binding | 1.05E-02 |
| 34 | GO:0005200: structural constituent of cytoskeleton | 1.11E-02 |
| 35 | GO:0016597: amino acid binding | 1.16E-02 |
| 36 | GO:0003674: molecular_function | 1.36E-02 |
| 37 | GO:0004364: glutathione transferase activity | 2.01E-02 |
| 38 | GO:0003777: microtubule motor activity | 2.75E-02 |
| 39 | GO:0019843: rRNA binding | 3.85E-02 |
| 40 | GO:0016740: transferase activity | 4.23E-02 |
| 41 | GO:0008565: protein transporter activity | 4.38E-02 |
| 42 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.61E-02 |
| 43 | GO:0015297: antiporter activity | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.34E-27 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 8.53E-18 |
| 3 | GO:0009579: thylakoid | 1.08E-09 |
| 4 | GO:0009570: chloroplast stroma | 2.01E-09 |
| 5 | GO:0009941: chloroplast envelope | 2.45E-09 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.28E-07 |
| 7 | GO:0033281: TAT protein transport complex | 1.76E-06 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.88E-05 |
| 9 | GO:0030095: chloroplast photosystem II | 2.08E-04 |
| 10 | GO:0008274: gamma-tubulin ring complex | 2.20E-04 |
| 11 | GO:0009534: chloroplast thylakoid | 3.61E-04 |
| 12 | GO:0009573: chloroplast ribulose bisphosphate carboxylase complex | 3.67E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 4.73E-04 |
| 14 | GO:0000923: equatorial microtubule organizing center | 5.28E-04 |
| 15 | GO:0030286: dynein complex | 7.02E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 8.88E-04 |
| 17 | GO:0010319: stromule | 9.05E-04 |
| 18 | GO:0009295: nucleoid | 9.05E-04 |
| 19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.08E-03 |
| 20 | GO:0031359: integral component of chloroplast outer membrane | 1.51E-03 |
| 21 | GO:0031977: thylakoid lumen | 1.94E-03 |
| 22 | GO:0000922: spindle pole | 2.25E-03 |
| 23 | GO:0016324: apical plasma membrane | 2.80E-03 |
| 24 | GO:0009508: plastid chromosome | 3.69E-03 |
| 25 | GO:0043234: protein complex | 4.67E-03 |
| 26 | GO:0005875: microtubule associated complex | 4.67E-03 |
| 27 | GO:0042651: thylakoid membrane | 5.36E-03 |
| 28 | GO:0009654: photosystem II oxygen evolving complex | 5.36E-03 |
| 29 | GO:0009536: plastid | 5.52E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 8.90E-03 |
| 31 | GO:0031969: chloroplast membrane | 1.32E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 1.46E-02 |
| 33 | GO:0031966: mitochondrial membrane | 2.43E-02 |
| 34 | GO:0010287: plastoglobule | 3.71E-02 |