Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051014: actin filament severing5.43E-06
2GO:0009446: putrescine biosynthetic process1.49E-05
3GO:0031125: rRNA 3'-end processing1.49E-05
4GO:0006527: arginine catabolic process1.49E-05
5GO:0016104: triterpenoid biosynthetic process2.75E-05
6GO:0006517: protein deglycosylation2.75E-05
7GO:0006013: mannose metabolic process2.75E-05
8GO:0000460: maturation of 5.8S rRNA5.99E-05
9GO:0010188: response to microbial phytotoxin5.99E-05
10GO:0010483: pollen tube reception5.99E-05
11GO:0008295: spermidine biosynthetic process5.99E-05
12GO:0009697: salicylic acid biosynthetic process7.90E-05
13GO:0030308: negative regulation of cell growth7.90E-05
14GO:0006596: polyamine biosynthetic process9.99E-05
15GO:0010310: regulation of hydrogen peroxide metabolic process1.22E-04
16GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.46E-04
17GO:0006401: RNA catabolic process1.46E-04
18GO:0051693: actin filament capping1.46E-04
19GO:0019745: pentacyclic triterpenoid biosynthetic process1.46E-04
20GO:0019375: galactolipid biosynthetic process1.70E-04
21GO:0009642: response to light intensity1.70E-04
22GO:0006491: N-glycan processing1.70E-04
23GO:0007338: single fertilization2.22E-04
24GO:0042023: DNA endoreduplication4.58E-04
25GO:0051017: actin filament bundle assembly4.90E-04
26GO:0006487: protein N-linked glycosylation4.90E-04
27GO:0007010: cytoskeleton organization4.90E-04
28GO:0006366: transcription from RNA polymerase II promoter5.55E-04
29GO:0009741: response to brassinosteroid7.65E-04
30GO:0008654: phospholipid biosynthetic process8.38E-04
31GO:0009791: post-embryonic development8.38E-04
32GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.15E-03
33GO:0042538: hyperosmotic salinity response2.11E-03
34GO:0006364: rRNA processing2.21E-03
35GO:0048316: seed development2.53E-03
36GO:0009742: brassinosteroid mediated signaling pathway2.92E-03
37GO:0000398: mRNA splicing, via spliceosome3.09E-03
38GO:0016036: cellular response to phosphate starvation3.87E-03
39GO:0009723: response to ethylene6.06E-03
40GO:0016192: vesicle-mediated transport6.58E-03
41GO:0009651: response to salt stress6.65E-03
42GO:0046777: protein autophosphorylation6.66E-03
43GO:0045892: negative regulation of transcription, DNA-templated7.28E-03
44GO:0006886: intracellular protein transport7.36E-03
45GO:0006629: lipid metabolic process8.33E-03
46GO:0006397: mRNA processing8.58E-03
47GO:0048364: root development8.58E-03
48GO:0009873: ethylene-activated signaling pathway9.96E-03
49GO:0009738: abscisic acid-activated signaling pathway1.22E-02
50GO:0042742: defense response to bacterium2.06E-02
51GO:0006979: response to oxidative stress2.07E-02
52GO:0009409: response to cold2.56E-02
53GO:0007165: signal transduction3.48E-02
54GO:0050832: defense response to fungus4.48E-02
55GO:0016567: protein ubiquitination4.56E-02
RankGO TermAdjusted P value
1GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity0.00E+00
2GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.58E-09
3GO:0008792: arginine decarboxylase activity5.43E-06
4GO:0000978: RNA polymerase II core promoter proximal region sequence-specific DNA binding5.43E-06
5GO:0030371: translation repressor activity5.43E-06
6GO:0042300: beta-amyrin synthase activity2.75E-05
7GO:0042299: lupeol synthase activity4.27E-05
8GO:0004559: alpha-mannosidase activity1.22E-04
9GO:0008195: phosphatidate phosphatase activity1.22E-04
10GO:0030276: clathrin binding7.65E-04
11GO:0051015: actin filament binding9.50E-04
12GO:0004004: ATP-dependent RNA helicase activity1.23E-03
13GO:0035091: phosphatidylinositol binding1.91E-03
14GO:0016874: ligase activity2.70E-03
15GO:0003779: actin binding2.75E-03
16GO:0008026: ATP-dependent helicase activity2.92E-03
17GO:0019843: rRNA binding3.26E-03
18GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.57E-03
19GO:0008270: zinc ion binding1.08E-02
20GO:0030246: carbohydrate binding1.54E-02
21GO:0004672: protein kinase activity2.71E-02
22GO:0003729: mRNA binding2.73E-02
23GO:0016787: hydrolase activity3.55E-02
RankGO TermAdjusted P value
1GO:0043680: filiform apparatus0.00E+00
2GO:0030124: AP-4 adaptor complex2.75E-05
3GO:0005884: actin filament3.06E-04
4GO:0005905: clathrin-coated pit5.55E-04
5GO:0005654: nucleoplasm3.21E-03
6GO:0009506: plasmodesma4.71E-03
7GO:0005802: trans-Golgi network1.74E-02
8GO:0005768: endosome1.91E-02
9GO:0000139: Golgi membrane2.56E-02
10GO:0005730: nucleolus3.00E-02
11GO:0005794: Golgi apparatus3.58E-02
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Gene type



Gene DE type