GO Enrichment Analysis of Co-expressed Genes with
AT1G04480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990569: UDP-N-acetylglucosamine transmembrane transport | 0.00E+00 |
| 2 | GO:0015789: UDP-N-acetylgalactosamine transport | 0.00E+00 |
| 3 | GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process | 0.00E+00 |
| 4 | GO:1903857: negative regulation of cytokinin dehydrogenase activity | 0.00E+00 |
| 5 | GO:0009264: deoxyribonucleotide catabolic process | 0.00E+00 |
| 6 | GO:0006412: translation | 2.88E-142 |
| 7 | GO:0042254: ribosome biogenesis | 1.05E-54 |
| 8 | GO:0000027: ribosomal large subunit assembly | 2.24E-11 |
| 9 | GO:0006626: protein targeting to mitochondrion | 3.40E-10 |
| 10 | GO:0000028: ribosomal small subunit assembly | 7.72E-10 |
| 11 | GO:0009955: adaxial/abaxial pattern specification | 3.96E-06 |
| 12 | GO:1902626: assembly of large subunit precursor of preribosome | 1.69E-05 |
| 13 | GO:0030150: protein import into mitochondrial matrix | 1.30E-04 |
| 14 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.24E-04 |
| 15 | GO:1990258: histone glutamine methylation | 3.24E-04 |
| 16 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 3.24E-04 |
| 17 | GO:0006407: rRNA export from nucleus | 3.24E-04 |
| 18 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 3.24E-04 |
| 19 | GO:0006475: internal protein amino acid acetylation | 3.24E-04 |
| 20 | GO:0017198: N-terminal peptidyl-serine acetylation | 3.24E-04 |
| 21 | GO:0030490: maturation of SSU-rRNA | 3.24E-04 |
| 22 | GO:0006434: seryl-tRNA aminoacylation | 3.24E-04 |
| 23 | GO:0000494: box C/D snoRNA 3'-end processing | 3.24E-04 |
| 24 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.24E-04 |
| 25 | GO:0009735: response to cytokinin | 3.53E-04 |
| 26 | GO:0015786: UDP-glucose transport | 7.07E-04 |
| 27 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 7.07E-04 |
| 28 | GO:0048569: post-embryonic animal organ development | 7.07E-04 |
| 29 | GO:0009967: positive regulation of signal transduction | 7.07E-04 |
| 30 | GO:0006820: anion transport | 9.08E-04 |
| 31 | GO:0002181: cytoplasmic translation | 1.15E-03 |
| 32 | GO:0015783: GDP-fucose transport | 1.15E-03 |
| 33 | GO:0010476: gibberellin mediated signaling pathway | 1.15E-03 |
| 34 | GO:0042256: mature ribosome assembly | 1.15E-03 |
| 35 | GO:0090506: axillary shoot meristem initiation | 1.15E-03 |
| 36 | GO:0006446: regulation of translational initiation | 1.16E-03 |
| 37 | GO:0032981: mitochondrial respiratory chain complex I assembly | 1.65E-03 |
| 38 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 1.65E-03 |
| 39 | GO:0072334: UDP-galactose transmembrane transport | 1.65E-03 |
| 40 | GO:0015992: proton transport | 1.93E-03 |
| 41 | GO:0007005: mitochondrion organization | 2.11E-03 |
| 42 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.21E-03 |
| 43 | GO:2000032: regulation of secondary shoot formation | 2.21E-03 |
| 44 | GO:0009165: nucleotide biosynthetic process | 2.21E-03 |
| 45 | GO:0042274: ribosomal small subunit biogenesis | 2.21E-03 |
| 46 | GO:0031167: rRNA methylation | 2.82E-03 |
| 47 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 2.82E-03 |
| 48 | GO:0007029: endoplasmic reticulum organization | 2.82E-03 |
| 49 | GO:1902183: regulation of shoot apical meristem development | 2.82E-03 |
| 50 | GO:0045040: protein import into mitochondrial outer membrane | 3.49E-03 |
| 51 | GO:0001731: formation of translation preinitiation complex | 3.49E-03 |
| 52 | GO:0016070: RNA metabolic process | 3.49E-03 |
| 53 | GO:0000470: maturation of LSU-rRNA | 3.49E-03 |
| 54 | GO:0006414: translational elongation | 3.57E-03 |
| 55 | GO:0000054: ribosomal subunit export from nucleus | 4.20E-03 |
| 56 | GO:0000245: spliceosomal complex assembly | 4.20E-03 |
| 57 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 4.95E-03 |
| 58 | GO:0000398: mRNA splicing, via spliceosome | 5.13E-03 |
| 59 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 5.76E-03 |
| 60 | GO:0001510: RNA methylation | 6.60E-03 |
| 61 | GO:0010204: defense response signaling pathway, resistance gene-independent | 6.60E-03 |
| 62 | GO:0015780: nucleotide-sugar transport | 7.48E-03 |
| 63 | GO:0098656: anion transmembrane transport | 7.48E-03 |
| 64 | GO:0009245: lipid A biosynthetic process | 7.48E-03 |
| 65 | GO:0006413: translational initiation | 7.85E-03 |
| 66 | GO:0000387: spliceosomal snRNP assembly | 8.41E-03 |
| 67 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 9.37E-03 |
| 68 | GO:0006913: nucleocytoplasmic transport | 1.04E-02 |
| 69 | GO:0015031: protein transport | 1.04E-02 |
| 70 | GO:0010015: root morphogenesis | 1.04E-02 |
| 71 | GO:0008283: cell proliferation | 1.21E-02 |
| 72 | GO:0010102: lateral root morphogenesis | 1.25E-02 |
| 73 | GO:0009965: leaf morphogenesis | 1.36E-02 |
| 74 | GO:0048467: gynoecium development | 1.36E-02 |
| 75 | GO:0090351: seedling development | 1.48E-02 |
| 76 | GO:0006364: rRNA processing | 1.63E-02 |
| 77 | GO:0009116: nucleoside metabolic process | 1.72E-02 |
| 78 | GO:0071215: cellular response to abscisic acid stimulus | 2.23E-02 |
| 79 | GO:0040007: growth | 2.23E-02 |
| 80 | GO:0010584: pollen exine formation | 2.37E-02 |
| 81 | GO:0051028: mRNA transport | 2.51E-02 |
| 82 | GO:0008033: tRNA processing | 2.65E-02 |
| 83 | GO:0000413: protein peptidyl-prolyl isomerization | 2.65E-02 |
| 84 | GO:0006606: protein import into nucleus | 2.65E-02 |
| 85 | GO:0009749: response to glucose | 3.10E-02 |
| 86 | GO:0010252: auxin homeostasis | 3.73E-02 |
| 87 | GO:0016579: protein deubiquitination | 4.06E-02 |
| 88 | GO:0016126: sterol biosynthetic process | 4.23E-02 |
| 89 | GO:0008380: RNA splicing | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0003735: structural constituent of ribosome | 1.81E-171 |
| 4 | GO:0003729: mRNA binding | 1.95E-31 |
| 5 | GO:0019843: rRNA binding | 2.56E-13 |
| 6 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.71E-06 |
| 7 | GO:0001055: RNA polymerase II activity | 2.56E-05 |
| 8 | GO:0008097: 5S rRNA binding | 3.75E-05 |
| 9 | GO:0001054: RNA polymerase I activity | 4.25E-05 |
| 10 | GO:0001056: RNA polymerase III activity | 5.30E-05 |
| 11 | GO:0003746: translation elongation factor activity | 1.78E-04 |
| 12 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 3.24E-04 |
| 13 | GO:1990259: histone-glutamine methyltransferase activity | 3.24E-04 |
| 14 | GO:1990189: peptide-serine-N-acetyltransferase activity | 3.24E-04 |
| 15 | GO:0004828: serine-tRNA ligase activity | 3.24E-04 |
| 16 | GO:0015288: porin activity | 3.40E-04 |
| 17 | GO:0008308: voltage-gated anion channel activity | 4.17E-04 |
| 18 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.41E-04 |
| 19 | GO:0005078: MAP-kinase scaffold activity | 7.07E-04 |
| 20 | GO:0032947: protein complex scaffold | 1.15E-03 |
| 21 | GO:0008253: 5'-nucleotidase activity | 1.15E-03 |
| 22 | GO:0008649: rRNA methyltransferase activity | 1.15E-03 |
| 23 | GO:0005457: GDP-fucose transmembrane transporter activity | 1.15E-03 |
| 24 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 1.15E-03 |
| 25 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.65E-03 |
| 26 | GO:0004749: ribose phosphate diphosphokinase activity | 1.65E-03 |
| 27 | GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.21E-03 |
| 28 | GO:0016004: phospholipase activator activity | 2.21E-03 |
| 29 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.82E-03 |
| 30 | GO:0031177: phosphopantetheine binding | 3.49E-03 |
| 31 | GO:0000035: acyl binding | 4.20E-03 |
| 32 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.20E-03 |
| 33 | GO:0030515: snoRNA binding | 4.95E-03 |
| 34 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 4.95E-03 |
| 35 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 4.95E-03 |
| 36 | GO:0043022: ribosome binding | 5.76E-03 |
| 37 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 5.76E-03 |
| 38 | GO:0008135: translation factor activity, RNA binding | 6.60E-03 |
| 39 | GO:0003723: RNA binding | 7.35E-03 |
| 40 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.04E-02 |
| 41 | GO:0044183: protein binding involved in protein folding | 1.04E-02 |
| 42 | GO:0003743: translation initiation factor activity | 1.05E-02 |
| 43 | GO:0015266: protein channel activity | 1.25E-02 |
| 44 | GO:0031418: L-ascorbic acid binding | 1.72E-02 |
| 45 | GO:0051087: chaperone binding | 1.84E-02 |
| 46 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 1.97E-02 |
| 47 | GO:0004298: threonine-type endopeptidase activity | 1.97E-02 |
| 48 | GO:0008514: organic anion transmembrane transporter activity | 2.37E-02 |
| 49 | GO:0008080: N-acetyltransferase activity | 2.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0005840: ribosome | 2.19E-124 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 6.50E-122 |
| 4 | GO:0022626: cytosolic ribosome | 1.41E-101 |
| 5 | GO:0022627: cytosolic small ribosomal subunit | 1.43E-64 |
| 6 | GO:0005737: cytoplasm | 4.74E-38 |
| 7 | GO:0005829: cytosol | 1.81E-29 |
| 8 | GO:0005730: nucleolus | 3.31E-29 |
| 9 | GO:0009506: plasmodesma | 4.94E-24 |
| 10 | GO:0015934: large ribosomal subunit | 1.58E-18 |
| 11 | GO:0005773: vacuole | 1.17E-13 |
| 12 | GO:0005774: vacuolar membrane | 7.83E-13 |
| 13 | GO:0016020: membrane | 1.41E-11 |
| 14 | GO:0015935: small ribosomal subunit | 5.07E-11 |
| 15 | GO:0005618: cell wall | 8.38E-09 |
| 16 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.32E-06 |
| 17 | GO:0005736: DNA-directed RNA polymerase I complex | 1.91E-05 |
| 18 | GO:0005666: DNA-directed RNA polymerase III complex | 2.56E-05 |
| 19 | GO:0000418: DNA-directed RNA polymerase IV complex | 3.33E-05 |
| 20 | GO:0000419: DNA-directed RNA polymerase V complex | 1.11E-04 |
| 21 | GO:0005758: mitochondrial intermembrane space | 1.30E-04 |
| 22 | GO:0005741: mitochondrial outer membrane | 1.72E-04 |
| 23 | GO:0005886: plasma membrane | 1.87E-04 |
| 24 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.49E-04 |
| 25 | GO:0009507: chloroplast | 3.10E-04 |
| 26 | GO:0030686: 90S preribosome | 3.24E-04 |
| 27 | GO:0005742: mitochondrial outer membrane translocase complex | 4.17E-04 |
| 28 | GO:0046930: pore complex | 4.17E-04 |
| 29 | GO:0005743: mitochondrial inner membrane | 4.47E-04 |
| 30 | GO:0005681: spliceosomal complex | 5.72E-04 |
| 31 | GO:0071011: precatalytic spliceosome | 5.92E-04 |
| 32 | GO:0031415: NatA complex | 7.07E-04 |
| 33 | GO:0071013: catalytic step 2 spliceosome | 7.96E-04 |
| 34 | GO:0005732: small nucleolar ribonucleoprotein complex | 8.66E-04 |
| 35 | GO:0019013: viral nucleocapsid | 1.03E-03 |
| 36 | GO:0034719: SMN-Sm protein complex | 1.15E-03 |
| 37 | GO:0005853: eukaryotic translation elongation factor 1 complex | 1.15E-03 |
| 38 | GO:0005682: U5 snRNP | 2.21E-03 |
| 39 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 2.21E-03 |
| 40 | GO:0005687: U4 snRNP | 2.82E-03 |
| 41 | GO:0097526: spliceosomal tri-snRNP complex | 2.82E-03 |
| 42 | GO:0016282: eukaryotic 43S preinitiation complex | 3.49E-03 |
| 43 | GO:0031428: box C/D snoRNP complex | 3.49E-03 |
| 44 | GO:0000974: Prp19 complex | 3.49E-03 |
| 45 | GO:0033290: eukaryotic 48S preinitiation complex | 4.20E-03 |
| 46 | GO:0005689: U12-type spliceosomal complex | 4.20E-03 |
| 47 | GO:0016272: prefoldin complex | 4.20E-03 |
| 48 | GO:0071004: U2-type prespliceosome | 5.76E-03 |
| 49 | GO:0005688: U6 snRNP | 5.76E-03 |
| 50 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 6.60E-03 |
| 51 | GO:0005685: U1 snRNP | 7.48E-03 |
| 52 | GO:0015030: Cajal body | 8.41E-03 |
| 53 | GO:0005686: U2 snRNP | 9.37E-03 |
| 54 | GO:0005740: mitochondrial envelope | 9.37E-03 |
| 55 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.04E-02 |
| 56 | GO:0032040: small-subunit processome | 1.14E-02 |
| 57 | GO:0005750: mitochondrial respiratory chain complex III | 1.36E-02 |
| 58 | GO:0000502: proteasome complex | 1.63E-02 |
| 59 | GO:0005635: nuclear envelope | 1.75E-02 |
| 60 | GO:0070469: respiratory chain | 1.84E-02 |
| 61 | GO:0005839: proteasome core complex | 1.97E-02 |
| 62 | GO:0005834: heterotrimeric G-protein complex | 2.06E-02 |
| 63 | GO:0016592: mediator complex | 3.41E-02 |
| 64 | GO:0005622: intracellular | 4.66E-02 |