co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009236: cobalamin biosynthetic process	0.00E+00
2	GO:0018293: protein-FAD linkage	0.00E+00
3	GO:0034553: mitochondrial respiratory chain complex II assembly	0.00E+00
4	GO:0009853: photorespiration	3.54E-07
5	GO:0006099: tricarboxylic acid cycle	3.92E-07
6	GO:0000103: sulfate assimilation	2.67E-05
7	GO:0019354: siroheme biosynthetic process	3.50E-05
8	GO:0031539: positive regulation of anthocyanin metabolic process	3.50E-05
9	GO:0015992: proton transport	9.30E-05
10	GO:0055114: oxidation-reduction process	9.72E-05
11	GO:0045793: positive regulation of cell size	1.52E-04
12	GO:0006760: folic acid-containing compound metabolic process	1.52E-04
13	GO:0015986: ATP synthesis coupled proton transport	1.74E-04
14	GO:0032877: positive regulation of DNA endoreduplication	2.25E-04
15	GO:0009963: positive regulation of flavonoid biosynthetic process	2.25E-04
16	GO:0044205: 'de novo' UMP biosynthetic process	3.05E-04
17	GO:0051781: positive regulation of cell division	3.05E-04
18	GO:0006221: pyrimidine nucleotide biosynthetic process	3.05E-04
19	GO:0032366: intracellular sterol transport	3.05E-04
20	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	4.78E-04
21	GO:0070814: hydrogen sulfide biosynthetic process	4.78E-04
22	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	5.70E-04
23	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	6.66E-04
24	GO:0000028: ribosomal small subunit assembly	7.68E-04
25	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.68E-04
26	GO:0010099: regulation of photomorphogenesis	8.71E-04
27	GO:0022900: electron transport chain	8.71E-04
28	GO:0006754: ATP biosynthetic process	9.78E-04
29	GO:0009245: lipid A biosynthetic process	9.78E-04
30	GO:0009970: cellular response to sulfate starvation	1.20E-03
31	GO:0006829: zinc II ion transport	1.57E-03
32	GO:0042753: positive regulation of circadian rhythm	1.97E-03
33	GO:0006487: protein N-linked glycosylation	2.12E-03
34	GO:0010017: red or far-red light signaling pathway	2.56E-03
35	GO:0080022: primary root development	3.20E-03
36	GO:0015991: ATP hydrolysis coupled proton transport	3.20E-03
37	GO:0009958: positive gravitropism	3.36E-03
38	GO:0006662: glycerol ether metabolic process	3.36E-03
39	GO:0045454: cell redox homeostasis	4.42E-03
40	GO:0000910: cytokinesis	4.80E-03
41	GO:0006499: N-terminal protein myristoylation	6.40E-03
42	GO:0009407: toxin catabolic process	6.40E-03
43	GO:0010218: response to far red light	6.40E-03
44	GO:0034599: cellular response to oxidative stress	7.27E-03
45	GO:0030001: metal ion transport	7.72E-03
46	GO:0010114: response to red light	8.41E-03
47	GO:0009640: photomorphogenesis	8.41E-03
48	GO:0009636: response to toxic substance	9.12E-03
49	GO:0006486: protein glycosylation	1.04E-02
50	GO:0009585: red, far-red light phototransduction	1.04E-02
51	GO:0010224: response to UV-B	1.06E-02
52	GO:0009740: gibberellic acid mediated signaling pathway	1.27E-02
53	GO:0006633: fatty acid biosynthetic process	1.83E-02
54	GO:0006979: response to oxidative stress	1.97E-02
55	GO:0009826: unidimensional cell growth	2.60E-02
56	GO:0080167: response to karrikin	3.11E-02
57	GO:0016042: lipid catabolic process	4.03E-02
58	GO:0006629: lipid metabolic process	4.11E-02
59	GO:0008152: metabolic process	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0016852: sirohydrochlorin cobaltochelatase activity	0.00E+00
2	GO:0051266: sirohydrochlorin ferrochelatase activity	0.00E+00
3	GO:0004151: dihydroorotase activity	0.00E+00
4	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.08E-06
5	GO:0008137: NADH dehydrogenase (ubiquinone) activity	4.47E-06
6	GO:0051539: 4 iron, 4 sulfur cluster binding	2.45E-05
7	GO:0004129: cytochrome-c oxidase activity	3.20E-05
8	GO:0004781: sulfate adenylyltransferase (ATP) activity	1.52E-04
9	GO:0005047: signal recognition particle binding	1.52E-04
10	GO:0004576: oligosaccharyl transferase activity	3.05E-04
11	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	3.05E-04
12	GO:0010011: auxin binding	3.05E-04
13	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	3.05E-04
14	GO:0008177: succinate dehydrogenase (ubiquinone) activity	3.89E-04
15	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	3.89E-04
16	GO:0050897: cobalt ion binding	4.43E-04
17	GO:0031177: phosphopantetheine binding	4.78E-04
18	GO:0000035: acyl binding	5.70E-04
19	GO:0004602: glutathione peroxidase activity	5.70E-04
20	GO:0008121: ubiquinol-cytochrome-c reductase activity	6.66E-04
21	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	7.68E-04
22	GO:0015035: protein disulfide oxidoreductase activity	1.18E-03
23	GO:0008794: arsenate reductase (glutaredoxin) activity	1.32E-03
24	GO:0051536: iron-sulfur cluster binding	2.12E-03
25	GO:0047134: protein-disulfide reductase activity	3.03E-03
26	GO:0046873: metal ion transmembrane transporter activity	3.36E-03
27	GO:0004791: thioredoxin-disulfide reductase activity	3.53E-03
28	GO:0004872: receptor activity	3.70E-03
29	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.24E-03
30	GO:0016597: amino acid binding	4.80E-03
31	GO:0004364: glutathione transferase activity	8.18E-03
32	GO:0003690: double-stranded DNA binding	1.06E-02
33	GO:0016298: lipase activity	1.06E-02
34	GO:0016746: transferase activity, transferring acyl groups	1.36E-02
35	GO:0005507: copper ion binding	1.38E-02
36	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.71E-02
37	GO:0042802: identical protein binding	2.32E-02
38	GO:0004601: peroxidase activity	2.67E-02
39	GO:0016788: hydrolase activity, acting on ester bonds	2.71E-02
40	GO:0052689: carboxylic ester hydrolase activity	3.34E-02
41	GO:0009055: electron carrier activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0016469: proton-transporting two-sector ATPase complex	0.00E+00
2	GO:0005747: mitochondrial respiratory chain complex I	4.61E-16
3	GO:0005739: mitochondrion	6.82E-10
4	GO:0045271: respiratory chain complex I	6.90E-09
5	GO:0045273: respiratory chain complex II	4.31E-08
6	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	4.31E-08
7	GO:0005753: mitochondrial proton-transporting ATP synthase complex	5.91E-07
8	GO:0031966: mitochondrial membrane	1.05E-06
9	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	1.51E-06
10	GO:0016471: vacuolar proton-transporting V-type ATPase complex	3.05E-04
11	GO:0005773: vacuole	3.88E-04
12	GO:0005746: mitochondrial respiratory chain	3.89E-04
13	GO:0008250: oligosaccharyltransferase complex	3.89E-04
14	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	4.78E-04
15	GO:0005763: mitochondrial small ribosomal subunit	9.78E-04
16	GO:0005750: mitochondrial respiratory chain complex III	1.70E-03
17	GO:0005758: mitochondrial intermembrane space	2.12E-03
18	GO:0070469: respiratory chain	2.26E-03
19	GO:0005788: endoplasmic reticulum lumen	5.18E-03
20	GO:0005829: cytosol	6.05E-03
21	GO:0000325: plant-type vacuole	6.61E-03
22	GO:0005774: vacuolar membrane	1.65E-02
23	GO:0005759: mitochondrial matrix	1.83E-02
24	GO:0005730: nucleolus	3.31E-02
25	GO:0009507: chloroplast	3.86E-02
26	GO:0005783: endoplasmic reticulum	3.97E-02