co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G04220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904526: regulation of microtubule binding	0.00E+00
2	GO:0010046: response to mycotoxin	0.00E+00
3	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
4	GO:1905499: trichome papilla formation	0.00E+00
5	GO:0019593: mannitol biosynthetic process	0.00E+00
6	GO:0009667: plastid inner membrane organization	0.00E+00
7	GO:0009737: response to abscisic acid	2.71E-11
8	GO:0042335: cuticle development	1.95E-09
9	GO:0010025: wax biosynthetic process	1.41E-08
10	GO:0009631: cold acclimation	6.94E-08
11	GO:0009409: response to cold	9.73E-06
12	GO:0009414: response to water deprivation	1.83E-05
13	GO:0006633: fatty acid biosynthetic process	7.58E-05
14	GO:0006631: fatty acid metabolic process	7.79E-05
15	GO:0009415: response to water	1.76E-04
16	GO:2000070: regulation of response to water deprivation	1.76E-04
17	GO:0006723: cuticle hydrocarbon biosynthetic process	2.09E-04
18	GO:1902039: negative regulation of seed dormancy process	2.09E-04
19	GO:0080051: cutin transport	2.09E-04
20	GO:0034472: snRNA 3'-end processing	2.09E-04
21	GO:0009609: response to symbiotic bacterium	2.09E-04
22	GO:0051180: vitamin transport	2.09E-04
23	GO:0030974: thiamine pyrophosphate transport	2.09E-04
24	GO:0009873: ethylene-activated signaling pathway	2.28E-04
25	GO:0006970: response to osmotic stress	2.62E-04
26	GO:0010286: heat acclimation	2.74E-04
27	GO:0042761: very long-chain fatty acid biosynthetic process	3.16E-04
28	GO:2000280: regulation of root development	3.16E-04
29	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.44E-04
30	GO:0010015: root morphogenesis	4.29E-04
31	GO:0000038: very long-chain fatty acid metabolic process	4.29E-04
32	GO:0031407: oxylipin metabolic process	4.66E-04
33	GO:0010289: homogalacturonan biosynthetic process	4.66E-04
34	GO:2000030: regulation of response to red or far red light	4.66E-04
35	GO:0015908: fatty acid transport	4.66E-04
36	GO:0044419: interspecies interaction between organisms	4.66E-04
37	GO:0015893: drug transport	4.66E-04
38	GO:0048838: release of seed from dormancy	4.66E-04
39	GO:1901679: nucleotide transmembrane transport	4.66E-04
40	GO:0010143: cutin biosynthetic process	6.29E-04
41	GO:0010150: leaf senescence	6.60E-04
42	GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid	7.59E-04
43	GO:0006081: cellular aldehyde metabolic process	7.59E-04
44	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.59E-04
45	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	7.59E-04
46	GO:0046168: glycerol-3-phosphate catabolic process	7.59E-04
47	GO:0043447: alkane biosynthetic process	7.59E-04
48	GO:0080121: AMP transport	7.59E-04
49	GO:0080168: abscisic acid transport	7.59E-04
50	GO:0006470: protein dephosphorylation	8.09E-04
51	GO:0009651: response to salt stress	8.26E-04
52	GO:0009269: response to desiccation	1.04E-03
53	GO:0010031: circumnutation	1.08E-03
54	GO:0009413: response to flooding	1.08E-03
55	GO:0051259: protein oligomerization	1.08E-03
56	GO:0006624: vacuolar protein processing	1.08E-03
57	GO:0006072: glycerol-3-phosphate metabolic process	1.08E-03
58	GO:0009809: lignin biosynthetic process	1.21E-03
59	GO:0009694: jasmonic acid metabolic process	1.44E-03
60	GO:0010222: stem vascular tissue pattern formation	1.44E-03
61	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.44E-03
62	GO:0006536: glutamate metabolic process	1.44E-03
63	GO:0006552: leucine catabolic process	1.44E-03
64	GO:0015867: ATP transport	1.44E-03
65	GO:0071585: detoxification of cadmium ion	1.44E-03
66	GO:0070417: cellular response to cold	1.45E-03
67	GO:0042631: cellular response to water deprivation	1.56E-03
68	GO:0050832: defense response to fungus	1.82E-03
69	GO:0006665: sphingolipid metabolic process	1.83E-03
70	GO:0009247: glycolipid biosynthetic process	1.83E-03
71	GO:0010200: response to chitin	1.85E-03
72	GO:0009416: response to light stimulus	1.88E-03
73	GO:0009611: response to wounding	1.95E-03
74	GO:0000302: response to reactive oxygen species	2.07E-03
75	GO:0006574: valine catabolic process	2.26E-03
76	GO:0015866: ADP transport	2.26E-03
77	GO:0048232: male gamete generation	2.26E-03
78	GO:0070814: hydrogen sulfide biosynthetic process	2.26E-03
79	GO:0045962: positive regulation of development, heterochronic	2.26E-03
80	GO:0035435: phosphate ion transmembrane transport	2.26E-03
81	GO:0006796: phosphate-containing compound metabolic process	2.26E-03
82	GO:1900425: negative regulation of defense response to bacterium	2.26E-03
83	GO:0098655: cation transmembrane transport	2.71E-03
84	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.71E-03
85	GO:0010555: response to mannitol	2.71E-03
86	GO:0045926: negative regulation of growth	2.71E-03
87	GO:0009082: branched-chain amino acid biosynthetic process	2.71E-03
88	GO:0010029: regulation of seed germination	3.15E-03
89	GO:1902074: response to salt	3.20E-03
90	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.20E-03
91	GO:0006401: RNA catabolic process	3.20E-03
92	GO:0030497: fatty acid elongation	3.20E-03
93	GO:0019375: galactolipid biosynthetic process	3.71E-03
94	GO:0050821: protein stabilization	3.71E-03
95	GO:0007155: cell adhesion	3.71E-03
96	GO:0008610: lipid biosynthetic process	3.71E-03
97	GO:0009819: drought recovery	3.71E-03
98	GO:0007623: circadian rhythm	3.80E-03
99	GO:0098656: anion transmembrane transport	4.80E-03
100	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	4.80E-03
101	GO:0006839: mitochondrial transport	5.60E-03
102	GO:0000103: sulfate assimilation	5.99E-03
103	GO:0055062: phosphate ion homeostasis	5.99E-03
104	GO:0051707: response to other organism	6.33E-03
105	GO:0018119: peptidyl-cysteine S-nitrosylation	6.62E-03
106	GO:0030148: sphingolipid biosynthetic process	6.62E-03
107	GO:0009644: response to high light intensity	6.85E-03
108	GO:0071365: cellular response to auxin stimulus	7.28E-03
109	GO:0006820: anion transport	7.28E-03
110	GO:0042538: hyperosmotic salinity response	7.95E-03
111	GO:0050826: response to freezing	7.96E-03
112	GO:0018107: peptidyl-threonine phosphorylation	7.96E-03
113	GO:0009725: response to hormone	7.96E-03
114	GO:0005986: sucrose biosynthetic process	7.96E-03
115	GO:0010588: cotyledon vascular tissue pattern formation	7.96E-03
116	GO:0006364: rRNA processing	8.54E-03
117	GO:0010030: positive regulation of seed germination	9.37E-03
118	GO:0070588: calcium ion transmembrane transport	9.37E-03
119	GO:0048367: shoot system development	1.04E-02
120	GO:2000377: regulation of reactive oxygen species metabolic process	1.09E-02
121	GO:0019344: cysteine biosynthetic process	1.09E-02
122	GO:0009695: jasmonic acid biosynthetic process	1.17E-02
123	GO:0051260: protein homooligomerization	1.25E-02
124	GO:0031408: oxylipin biosynthetic process	1.25E-02
125	GO:0055114: oxidation-reduction process	1.31E-02
126	GO:0030433: ubiquitin-dependent ERAD pathway	1.33E-02
127	GO:0031348: negative regulation of defense response	1.33E-02
128	GO:0010017: red or far-red light signaling pathway	1.33E-02
129	GO:0005975: carbohydrate metabolic process	1.34E-02
130	GO:0009751: response to salicylic acid	1.40E-02
131	GO:0001944: vasculature development	1.41E-02
132	GO:0010091: trichome branching	1.50E-02
133	GO:0010501: RNA secondary structure unwinding	1.68E-02
134	GO:0048868: pollen tube development	1.77E-02
135	GO:0009790: embryo development	1.78E-02
136	GO:0006814: sodium ion transport	1.86E-02
137	GO:0008654: phospholipid biosynthetic process	1.96E-02
138	GO:0009749: response to glucose	1.96E-02
139	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.06E-02
140	GO:0010193: response to ozone	2.06E-02
141	GO:0048235: pollen sperm cell differentiation	2.15E-02
142	GO:0010090: trichome morphogenesis	2.25E-02
143	GO:0071805: potassium ion transmembrane transport	2.46E-02
144	GO:0006904: vesicle docking involved in exocytosis	2.46E-02
145	GO:0051607: defense response to virus	2.57E-02
146	GO:0010027: thylakoid membrane organization	2.67E-02
147	GO:0009627: systemic acquired resistance	2.89E-02
148	GO:0010311: lateral root formation	3.34E-02
149	GO:0010119: regulation of stomatal movement	3.58E-02
150	GO:0055085: transmembrane transport	3.94E-02
151	GO:0009744: response to sucrose	4.57E-02
152	GO:0009640: photomorphogenesis	4.57E-02
153	GO:0009965: leaf morphogenesis	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
2	GO:0070566: adenylyltransferase activity	0.00E+00
3	GO:0005534: galactose binding	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0008419: RNA lariat debranching enzyme activity	0.00E+00
6	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
7	GO:0009922: fatty acid elongase activity	1.21E-09
8	GO:0070330: aromatase activity	1.15E-08
9	GO:0018685: alkane 1-monooxygenase activity	3.75E-07
10	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.86E-07
11	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.86E-07
12	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.86E-07
13	GO:0052747: sinapyl alcohol dehydrogenase activity	1.76E-04
14	GO:0015245: fatty acid transporter activity	2.09E-04
15	GO:0090422: thiamine pyrophosphate transporter activity	2.09E-04
16	GO:0090440: abscisic acid transporter activity	2.09E-04
17	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.09E-04
18	GO:0052631: sphingolipid delta-8 desaturase activity	2.09E-04
19	GO:0016629: 12-oxophytodienoate reductase activity	4.66E-04
20	GO:0001047: core promoter binding	4.66E-04
21	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	4.66E-04
22	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.92E-04
23	GO:0004722: protein serine/threonine phosphatase activity	5.61E-04
24	GO:0046423: allene-oxide cyclase activity	7.59E-04
25	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	7.59E-04
26	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	7.59E-04
27	GO:0004020: adenylylsulfate kinase activity	7.59E-04
28	GO:0047274: galactinol-sucrose galactosyltransferase activity	7.59E-04
29	GO:0052656: L-isoleucine transaminase activity	1.08E-03
30	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.08E-03
31	GO:0052654: L-leucine transaminase activity	1.08E-03
32	GO:0004351: glutamate decarboxylase activity	1.08E-03
33	GO:0052655: L-valine transaminase activity	1.08E-03
34	GO:0005432: calcium:sodium antiporter activity	1.08E-03
35	GO:0035250: UDP-galactosyltransferase activity	1.08E-03
36	GO:0004084: branched-chain-amino-acid transaminase activity	1.44E-03
37	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.83E-03
38	GO:0016772: transferase activity, transferring phosphorus-containing groups	1.83E-03
39	GO:0008381: mechanically-gated ion channel activity	1.83E-03
40	GO:0080122: AMP transmembrane transporter activity	1.83E-03
41	GO:0004872: receptor activity	1.94E-03
42	GO:0016746: transferase activity, transferring acyl groups	1.97E-03
43	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.26E-03
44	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.26E-03
45	GO:0005347: ATP transmembrane transporter activity	2.71E-03
46	GO:0015217: ADP transmembrane transporter activity	2.71E-03
47	GO:0102391: decanoate--CoA ligase activity	2.71E-03
48	GO:0004467: long-chain fatty acid-CoA ligase activity	3.20E-03
49	GO:0004427: inorganic diphosphatase activity	3.20E-03
50	GO:0016621: cinnamoyl-CoA reductase activity	3.20E-03
51	GO:0019899: enzyme binding	3.20E-03
52	GO:0004004: ATP-dependent RNA helicase activity	3.50E-03
53	GO:0015491: cation:cation antiporter activity	3.71E-03
54	GO:0004564: beta-fructofuranosidase activity	3.71E-03
55	GO:0005267: potassium channel activity	4.24E-03
56	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.80E-03
57	GO:0008289: lipid binding	5.27E-03
58	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.38E-03
59	GO:0004575: sucrose alpha-glucosidase activity	5.38E-03
60	GO:0004864: protein phosphatase inhibitor activity	5.99E-03
61	GO:0005262: calcium channel activity	7.96E-03
62	GO:0015114: phosphate ion transmembrane transporter activity	7.96E-03
63	GO:0000175: 3'-5'-exoribonuclease activity	7.96E-03
64	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.16E-02
65	GO:0051087: chaperone binding	1.17E-02
66	GO:0004540: ribonuclease activity	1.25E-02
67	GO:0018024: histone-lysine N-methyltransferase activity	1.59E-02
68	GO:0010181: FMN binding	1.86E-02
69	GO:0015297: antiporter activity	2.01E-02
70	GO:0004197: cysteine-type endopeptidase activity	2.15E-02
71	GO:0005506: iron ion binding	2.15E-02
72	GO:0044212: transcription regulatory region DNA binding	2.20E-02
73	GO:0016791: phosphatase activity	2.36E-02
74	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.46E-02
75	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.68E-02
76	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.11E-02
77	GO:0016788: hydrolase activity, acting on ester bonds	3.33E-02
78	GO:0015238: drug transmembrane transporter activity	3.34E-02
79	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.58E-02
80	GO:0052689: carboxylic ester hydrolase activity	4.46E-02
81	GO:0019825: oxygen binding	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0032039: integrator complex	0.00E+00
2	GO:0046658: anchored component of plasma membrane	1.66E-04
3	GO:0009923: fatty acid elongase complex	2.09E-04
4	GO:0031225: anchored component of membrane	2.71E-04
5	GO:0031357: integral component of chloroplast inner membrane	4.66E-04
6	GO:0009897: external side of plasma membrane	7.59E-04
7	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.08E-03
8	GO:0000178: exosome (RNase complex)	1.83E-03
9	GO:0005783: endoplasmic reticulum	2.09E-03
10	GO:0005778: peroxisomal membrane	2.66E-03
11	GO:0005743: mitochondrial inner membrane	2.86E-03
12	GO:0005770: late endosome	1.77E-02
13	GO:0016021: integral component of membrane	1.78E-02
14	GO:0000145: exocyst	2.15E-02
15	GO:0005694: chromosome	2.15E-02
16	GO:0000932: P-body	2.67E-02
17	GO:0009941: chloroplast envelope	3.61E-02
18	GO:0005874: microtubule	3.91E-02
19	GO:0005789: endoplasmic reticulum membrane	4.09E-02
20	GO:0031902: late endosome membrane	4.32E-02
21	GO:0005886: plasma membrane	4.72E-02