Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G04160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051180: vitamin transport3.50E-05
2GO:0030974: thiamine pyrophosphate transport3.50E-05
3GO:0010507: negative regulation of autophagy8.78E-05
4GO:0006898: receptor-mediated endocytosis8.78E-05
5GO:0015893: drug transport8.78E-05
6GO:0044210: 'de novo' CTP biosynthetic process1.52E-04
7GO:0016045: detection of bacterium1.52E-04
8GO:0010359: regulation of anion channel activity1.52E-04
9GO:0009961: response to 1-aminocyclopropane-1-carboxylic acid1.52E-04
10GO:0046786: viral replication complex formation and maintenance1.52E-04
11GO:0010371: regulation of gibberellin biosynthetic process2.25E-04
12GO:0046345: abscisic acid catabolic process3.05E-04
13GO:0006873: cellular ion homeostasis3.89E-04
14GO:0006665: sphingolipid metabolic process3.89E-04
15GO:0032957: inositol trisphosphate metabolic process3.89E-04
16GO:0009414: response to water deprivation5.54E-04
17GO:0009641: shade avoidance1.20E-03
18GO:0052544: defense response by callose deposition in cell wall1.32E-03
19GO:0050826: response to freezing1.57E-03
20GO:0018107: peptidyl-threonine phosphorylation1.57E-03
21GO:0045490: pectin catabolic process1.95E-03
22GO:0010468: regulation of gene expression2.32E-03
23GO:0001944: vasculature development2.71E-03
24GO:0010268: brassinosteroid homeostasis3.36E-03
25GO:0016132: brassinosteroid biosynthetic process3.88E-03
26GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.88E-03
27GO:0009639: response to red or far red light4.42E-03
28GO:0016125: sterol metabolic process4.42E-03
29GO:0019760: glucosinolate metabolic process4.42E-03
30GO:0010029: regulation of seed germination5.18E-03
31GO:0009751: response to salicylic acid5.36E-03
32GO:0016049: cell growth5.78E-03
33GO:0006811: ion transport6.40E-03
34GO:0009873: ethylene-activated signaling pathway7.01E-03
35GO:0006839: mitochondrial transport7.72E-03
36GO:0006631: fatty acid metabolic process7.95E-03
37GO:0008283: cell proliferation8.41E-03
38GO:0051707: response to other organism8.41E-03
39GO:0009640: photomorphogenesis8.41E-03
40GO:0009737: response to abscisic acid8.91E-03
41GO:0000165: MAPK cascade9.61E-03
42GO:0009611: response to wounding9.85E-03
43GO:0042538: hyperosmotic salinity response9.86E-03
44GO:0035556: intracellular signal transduction1.02E-02
45GO:0009809: lignin biosynthetic process1.04E-02
46GO:0042545: cell wall modification1.30E-02
47GO:0018105: peptidyl-serine phosphorylation1.36E-02
48GO:0009651: response to salt stress1.59E-02
49GO:0030154: cell differentiation2.13E-02
50GO:0007166: cell surface receptor signaling pathway2.15E-02
51GO:0009617: response to bacterium2.22E-02
52GO:0006970: response to osmotic stress2.82E-02
53GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.19E-02
54GO:0010200: response to chitin3.19E-02
55GO:0006355: regulation of transcription, DNA-templated3.45E-02
56GO:0006351: transcription, DNA-templated3.83E-02
57GO:0007275: multicellular organism development3.85E-02
58GO:0009408: response to heat4.11E-02
59GO:0009753: response to jasmonic acid4.32E-02
60GO:0006468: protein phosphorylation4.49E-02
61GO:0016310: phosphorylation4.78E-02
RankGO TermAdjusted P value
1GO:0003883: CTP synthase activity7.73E-07
2GO:0090422: thiamine pyrophosphate transporter activity3.50E-05
3GO:0017040: ceramidase activity8.78E-05
4GO:0010295: (+)-abscisic acid 8'-hydroxylase activity1.52E-04
5GO:0047325: inositol tetrakisphosphate 1-kinase activity1.52E-04
6GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.52E-04
7GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.25E-04
8GO:0044212: transcription regulatory region DNA binding5.75E-04
9GO:0016621: cinnamoyl-CoA reductase activity6.66E-04
10GO:0008308: voltage-gated anion channel activity8.71E-04
11GO:0043565: sequence-specific DNA binding1.59E-03
12GO:0008083: growth factor activity1.70E-03
13GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.70E-03
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.82E-03
15GO:0004857: enzyme inhibitor activity2.12E-03
16GO:0004707: MAP kinase activity2.41E-03
17GO:0030570: pectate lyase activity2.71E-03
18GO:0016301: kinase activity3.81E-03
19GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.60E-03
20GO:0045330: aspartyl esterase activity1.11E-02
21GO:0030599: pectinesterase activity1.27E-02
22GO:0005524: ATP binding1.37E-02
23GO:0016829: lyase activity1.65E-02
24GO:0046910: pectinesterase inhibitor activity1.86E-02
25GO:0003824: catalytic activity2.15E-02
26GO:0004674: protein serine/threonine kinase activity2.57E-02
27GO:0000287: magnesium ion binding2.64E-02
28GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.54E-02
29GO:0003700: transcription factor activity, sequence-specific DNA binding3.65E-02
30GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.82E-02
31GO:0003677: DNA binding4.84E-02
RankGO TermAdjusted P value
1GO:0010008: endosome membrane1.19E-02
2GO:0005622: intracellular1.72E-02
3GO:0046658: anchored component of plasma membrane2.39E-02
4GO:0031969: chloroplast membrane3.11E-02
5GO:0005743: mitochondrial inner membrane3.90E-02
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Gene type



Gene DE type