GO Enrichment Analysis of Co-expressed Genes with
AT1G03900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 2 | GO:0006983: ER overload response | 0.00E+00 |
| 3 | GO:0043201: response to leucine | 0.00E+00 |
| 4 | GO:0080052: response to histidine | 0.00E+00 |
| 5 | GO:0002143: tRNA wobble position uridine thiolation | 2.88E-05 |
| 6 | GO:0010265: SCF complex assembly | 2.88E-05 |
| 7 | GO:0009968: negative regulation of signal transduction | 2.88E-05 |
| 8 | GO:0080120: CAAX-box protein maturation | 2.88E-05 |
| 9 | GO:0071586: CAAX-box protein processing | 2.88E-05 |
| 10 | GO:0043547: positive regulation of GTPase activity | 2.88E-05 |
| 11 | GO:0009609: response to symbiotic bacterium | 2.88E-05 |
| 12 | GO:0043066: negative regulation of apoptotic process | 7.28E-05 |
| 13 | GO:0042939: tripeptide transport | 7.28E-05 |
| 14 | GO:0009805: coumarin biosynthetic process | 7.28E-05 |
| 15 | GO:0006556: S-adenosylmethionine biosynthetic process | 1.27E-04 |
| 16 | GO:0007166: cell surface receptor signaling pathway | 1.52E-04 |
| 17 | GO:2000114: regulation of establishment of cell polarity | 1.89E-04 |
| 18 | GO:0043207: response to external biotic stimulus | 1.89E-04 |
| 19 | GO:0072583: clathrin-dependent endocytosis | 1.89E-04 |
| 20 | GO:0042938: dipeptide transport | 2.57E-04 |
| 21 | GO:0016973: poly(A)+ mRNA export from nucleus | 3.30E-04 |
| 22 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.06E-04 |
| 23 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 4.06E-04 |
| 24 | GO:0043248: proteasome assembly | 4.06E-04 |
| 25 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 4.06E-04 |
| 26 | GO:0000911: cytokinesis by cell plate formation | 4.86E-04 |
| 27 | GO:0051707: response to other organism | 4.87E-04 |
| 28 | GO:0009753: response to jasmonic acid | 5.53E-04 |
| 29 | GO:0009610: response to symbiotic fungus | 5.68E-04 |
| 30 | GO:0006102: isocitrate metabolic process | 6.55E-04 |
| 31 | GO:0048766: root hair initiation | 6.55E-04 |
| 32 | GO:0006096: glycolytic process | 7.62E-04 |
| 33 | GO:0046686: response to cadmium ion | 7.65E-04 |
| 34 | GO:0010112: regulation of systemic acquired resistance | 8.35E-04 |
| 35 | GO:0043069: negative regulation of programmed cell death | 1.03E-03 |
| 36 | GO:0000038: very long-chain fatty acid metabolic process | 1.13E-03 |
| 37 | GO:0000266: mitochondrial fission | 1.23E-03 |
| 38 | GO:0010150: leaf senescence | 1.53E-03 |
| 39 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.17E-03 |
| 40 | GO:0080092: regulation of pollen tube growth | 2.17E-03 |
| 41 | GO:0006730: one-carbon metabolic process | 2.17E-03 |
| 42 | GO:0009693: ethylene biosynthetic process | 2.30E-03 |
| 43 | GO:0010091: trichome branching | 2.43E-03 |
| 44 | GO:0042127: regulation of cell proliferation | 2.43E-03 |
| 45 | GO:0010501: RNA secondary structure unwinding | 2.70E-03 |
| 46 | GO:0010051: xylem and phloem pattern formation | 2.70E-03 |
| 47 | GO:0010087: phloem or xylem histogenesis | 2.70E-03 |
| 48 | GO:0010182: sugar mediated signaling pathway | 2.84E-03 |
| 49 | GO:0042752: regulation of circadian rhythm | 2.99E-03 |
| 50 | GO:0009749: response to glucose | 3.13E-03 |
| 51 | GO:0010183: pollen tube guidance | 3.13E-03 |
| 52 | GO:0006886: intracellular protein transport | 3.56E-03 |
| 53 | GO:0030163: protein catabolic process | 3.58E-03 |
| 54 | GO:0071281: cellular response to iron ion | 3.58E-03 |
| 55 | GO:0006904: vesicle docking involved in exocytosis | 3.89E-03 |
| 56 | GO:0051607: defense response to virus | 4.05E-03 |
| 57 | GO:0009751: response to salicylic acid | 4.19E-03 |
| 58 | GO:0008152: metabolic process | 4.68E-03 |
| 59 | GO:0009867: jasmonic acid mediated signaling pathway | 5.94E-03 |
| 60 | GO:0006099: tricarboxylic acid cycle | 6.13E-03 |
| 61 | GO:0009737: response to abscisic acid | 6.47E-03 |
| 62 | GO:0006887: exocytosis | 6.69E-03 |
| 63 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 8.09E-03 |
| 64 | GO:0042538: hyperosmotic salinity response | 8.29E-03 |
| 65 | GO:0006468: protein phosphorylation | 8.58E-03 |
| 66 | GO:0009809: lignin biosynthetic process | 8.71E-03 |
| 67 | GO:0006486: protein glycosylation | 8.71E-03 |
| 68 | GO:0006857: oligopeptide transport | 9.14E-03 |
| 69 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.02E-02 |
| 70 | GO:0009626: plant-type hypersensitive response | 1.02E-02 |
| 71 | GO:0006508: proteolysis | 1.03E-02 |
| 72 | GO:0009620: response to fungus | 1.05E-02 |
| 73 | GO:0009742: brassinosteroid mediated signaling pathway | 1.16E-02 |
| 74 | GO:0009414: response to water deprivation | 1.49E-02 |
| 75 | GO:0042742: defense response to bacterium | 1.53E-02 |
| 76 | GO:0006470: protein dephosphorylation | 1.81E-02 |
| 77 | GO:0009617: response to bacterium | 1.86E-02 |
| 78 | GO:0009860: pollen tube growth | 2.36E-02 |
| 79 | GO:0007049: cell cycle | 2.42E-02 |
| 80 | GO:0009723: response to ethylene | 2.48E-02 |
| 81 | GO:0048366: leaf development | 2.52E-02 |
| 82 | GO:0045454: cell redox homeostasis | 2.97E-02 |
| 83 | GO:0032259: methylation | 3.34E-02 |
| 84 | GO:0009408: response to heat | 3.45E-02 |
| 85 | GO:0009793: embryo development ending in seed dormancy | 3.53E-02 |
| 86 | GO:0006397: mRNA processing | 3.55E-02 |
| 87 | GO:0009873: ethylene-activated signaling pathway | 4.13E-02 |
| 88 | GO:0009734: auxin-activated signaling pathway | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
| 2 | GO:0008186: RNA-dependent ATPase activity | 0.00E+00 |
| 3 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
| 4 | GO:0030955: potassium ion binding | 1.62E-05 |
| 5 | GO:0004743: pyruvate kinase activity | 1.62E-05 |
| 6 | GO:0042937: tripeptide transporter activity | 7.28E-05 |
| 7 | GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity | 7.28E-05 |
| 8 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.13E-04 |
| 9 | GO:0030276: clathrin binding | 1.23E-04 |
| 10 | GO:0042409: caffeoyl-CoA O-methyltransferase activity | 1.27E-04 |
| 11 | GO:0004478: methionine adenosyltransferase activity | 1.27E-04 |
| 12 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 1.27E-04 |
| 13 | GO:0004792: thiosulfate sulfurtransferase activity | 1.89E-04 |
| 14 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 1.89E-04 |
| 15 | GO:0000287: magnesium ion binding | 2.25E-04 |
| 16 | GO:0046527: glucosyltransferase activity | 2.57E-04 |
| 17 | GO:0042936: dipeptide transporter activity | 2.57E-04 |
| 18 | GO:0004930: G-protein coupled receptor activity | 2.57E-04 |
| 19 | GO:0008641: small protein activating enzyme activity | 3.30E-04 |
| 20 | GO:0036402: proteasome-activating ATPase activity | 4.06E-04 |
| 21 | GO:0008420: CTD phosphatase activity | 4.06E-04 |
| 22 | GO:0005198: structural molecule activity | 5.46E-04 |
| 23 | GO:0003724: RNA helicase activity | 7.44E-04 |
| 24 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 8.34E-04 |
| 25 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 8.34E-04 |
| 26 | GO:0045309: protein phosphorylated amino acid binding | 9.29E-04 |
| 27 | GO:0008026: ATP-dependent helicase activity | 9.59E-04 |
| 28 | GO:0008171: O-methyltransferase activity | 1.03E-03 |
| 29 | GO:0019904: protein domain specific binding | 1.13E-03 |
| 30 | GO:0008378: galactosyltransferase activity | 1.23E-03 |
| 31 | GO:0004175: endopeptidase activity | 1.45E-03 |
| 32 | GO:0017025: TBP-class protein binding | 1.56E-03 |
| 33 | GO:0008194: UDP-glycosyltransferase activity | 1.70E-03 |
| 34 | GO:0043424: protein histidine kinase binding | 1.92E-03 |
| 35 | GO:0005515: protein binding | 2.01E-03 |
| 36 | GO:0016301: kinase activity | 2.28E-03 |
| 37 | GO:0047134: protein-disulfide reductase activity | 2.57E-03 |
| 38 | GO:0005524: ATP binding | 2.63E-03 |
| 39 | GO:0004791: thioredoxin-disulfide reductase activity | 2.99E-03 |
| 40 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 41 | GO:0005096: GTPase activator activity | 5.22E-03 |
| 42 | GO:0004222: metalloendopeptidase activity | 5.40E-03 |
| 43 | GO:0051287: NAD binding | 8.09E-03 |
| 44 | GO:0031625: ubiquitin protein ligase binding | 9.36E-03 |
| 45 | GO:0016758: transferase activity, transferring hexosyl groups | 1.28E-02 |
| 46 | GO:0008017: microtubule binding | 1.70E-02 |
| 47 | GO:0061630: ubiquitin protein ligase activity | 2.71E-02 |
| 48 | GO:0004871: signal transducer activity | 3.07E-02 |
| 49 | GO:0046872: metal ion binding | 3.08E-02 |
| 50 | GO:0003924: GTPase activity | 3.45E-02 |
| 51 | GO:0016887: ATPase activity | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005829: cytosol | 4.37E-08 |
| 2 | GO:0045334: clathrin-coated endocytic vesicle | 2.88E-05 |
| 3 | GO:0005635: nuclear envelope | 3.60E-05 |
| 4 | GO:0030130: clathrin coat of trans-Golgi network vesicle | 1.27E-04 |
| 5 | GO:0030132: clathrin coat of coated pit | 1.27E-04 |
| 6 | GO:0070062: extracellular exosome | 1.89E-04 |
| 7 | GO:0031461: cullin-RING ubiquitin ligase complex | 1.89E-04 |
| 8 | GO:0000813: ESCRT I complex | 3.30E-04 |
| 9 | GO:0031597: cytosolic proteasome complex | 4.86E-04 |
| 10 | GO:0000794: condensed nuclear chromosome | 5.68E-04 |
| 11 | GO:0031595: nuclear proteasome complex | 5.68E-04 |
| 12 | GO:0000502: proteasome complex | 6.49E-04 |
| 13 | GO:0005886: plasma membrane | 6.93E-04 |
| 14 | GO:0008540: proteasome regulatory particle, base subcomplex | 9.29E-04 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.13E-03 |
| 16 | GO:0009524: phragmoplast | 1.18E-03 |
| 17 | GO:0009506: plasmodesma | 1.42E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.56E-03 |
| 19 | GO:0000775: chromosome, centromeric region | 2.17E-03 |
| 20 | GO:0009504: cell plate | 3.13E-03 |
| 21 | GO:0000145: exocyst | 3.43E-03 |
| 22 | GO:0005694: chromosome | 3.43E-03 |
| 23 | GO:0000139: Golgi membrane | 3.65E-03 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 4.68E-03 |
| 25 | GO:0000151: ubiquitin ligase complex | 5.05E-03 |
| 26 | GO:0005819: spindle | 6.31E-03 |
| 27 | GO:0031902: late endosome membrane | 6.69E-03 |
| 28 | GO:0005737: cytoplasm | 9.71E-03 |
| 29 | GO:0010008: endosome membrane | 1.00E-02 |
| 30 | GO:0031225: anchored component of membrane | 1.17E-02 |
| 31 | GO:0046658: anchored component of plasma membrane | 2.00E-02 |
| 32 | GO:0005789: endoplasmic reticulum membrane | 2.33E-02 |
| 33 | GO:0005874: microtubule | 2.55E-02 |
| 34 | GO:0005783: endoplasmic reticulum | 2.91E-02 |
| 35 | GO:0005794: Golgi apparatus | 3.02E-02 |