GO Enrichment Analysis of Co-expressed Genes with
AT1G03860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051050: positive regulation of transport | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 4 | GO:1904874: positive regulation of telomerase RNA localization to Cajal body | 0.00E+00 |
| 5 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 6 | GO:0006412: translation | 2.95E-22 |
| 7 | GO:0006458: 'de novo' protein folding | 7.53E-07 |
| 8 | GO:0042254: ribosome biogenesis | 8.72E-07 |
| 9 | GO:0045041: protein import into mitochondrial intermembrane space | 1.38E-06 |
| 10 | GO:0009735: response to cytokinin | 2.93E-06 |
| 11 | GO:0006626: protein targeting to mitochondrion | 1.47E-05 |
| 12 | GO:0046686: response to cadmium ion | 3.27E-05 |
| 13 | GO:0061077: chaperone-mediated protein folding | 4.29E-05 |
| 14 | GO:0007005: mitochondrion organization | 4.96E-05 |
| 15 | GO:0042026: protein refolding | 7.42E-05 |
| 16 | GO:0006364: rRNA processing | 9.07E-05 |
| 17 | GO:0006414: translational elongation | 1.12E-04 |
| 18 | GO:0006407: rRNA export from nucleus | 1.69E-04 |
| 19 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 1.69E-04 |
| 20 | GO:0031120: snRNA pseudouridine synthesis | 1.69E-04 |
| 21 | GO:0031118: rRNA pseudouridine synthesis | 1.69E-04 |
| 22 | GO:0006177: GMP biosynthetic process | 1.69E-04 |
| 23 | GO:0006434: seryl-tRNA aminoacylation | 1.69E-04 |
| 24 | GO:0000494: box C/D snoRNA 3'-end processing | 1.69E-04 |
| 25 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.69E-04 |
| 26 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.69E-04 |
| 27 | GO:1990258: histone glutamine methylation | 1.69E-04 |
| 28 | GO:0006189: 'de novo' IMP biosynthetic process | 1.95E-04 |
| 29 | GO:0010162: seed dormancy process | 2.75E-04 |
| 30 | GO:0045859: regulation of protein kinase activity | 3.83E-04 |
| 31 | GO:0045905: positive regulation of translational termination | 3.83E-04 |
| 32 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 3.83E-04 |
| 33 | GO:0045901: positive regulation of translational elongation | 3.83E-04 |
| 34 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 3.83E-04 |
| 35 | GO:0048569: post-embryonic animal organ development | 3.83E-04 |
| 36 | GO:0006452: translational frameshifting | 3.83E-04 |
| 37 | GO:0009967: positive regulation of signal transduction | 3.83E-04 |
| 38 | GO:0006954: inflammatory response | 6.25E-04 |
| 39 | GO:0010476: gibberellin mediated signaling pathway | 6.25E-04 |
| 40 | GO:0042256: mature ribosome assembly | 6.25E-04 |
| 41 | GO:0045039: protein import into mitochondrial inner membrane | 6.25E-04 |
| 42 | GO:0070475: rRNA base methylation | 6.25E-04 |
| 43 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.49E-04 |
| 44 | GO:0030150: protein import into mitochondrial matrix | 6.49E-04 |
| 45 | GO:0051131: chaperone-mediated protein complex assembly | 8.93E-04 |
| 46 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 8.93E-04 |
| 47 | GO:0007004: telomere maintenance via telomerase | 8.93E-04 |
| 48 | GO:0006164: purine nucleotide biosynthetic process | 8.93E-04 |
| 49 | GO:0009294: DNA mediated transformation | 9.28E-04 |
| 50 | GO:0008033: tRNA processing | 1.17E-03 |
| 51 | GO:0010483: pollen tube reception | 1.18E-03 |
| 52 | GO:0051205: protein insertion into membrane | 1.18E-03 |
| 53 | GO:0010197: polar nucleus fusion | 1.26E-03 |
| 54 | GO:0018279: protein N-linked glycosylation via asparagine | 1.50E-03 |
| 55 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 1.50E-03 |
| 56 | GO:0006461: protein complex assembly | 1.50E-03 |
| 57 | GO:0031167: rRNA methylation | 1.50E-03 |
| 58 | GO:0080156: mitochondrial mRNA modification | 1.54E-03 |
| 59 | GO:0000398: mRNA splicing, via spliceosome | 1.56E-03 |
| 60 | GO:0001731: formation of translation preinitiation complex | 1.85E-03 |
| 61 | GO:0016070: RNA metabolic process | 1.85E-03 |
| 62 | GO:0000470: maturation of LSU-rRNA | 1.85E-03 |
| 63 | GO:0016554: cytidine to uridine editing | 1.85E-03 |
| 64 | GO:0000741: karyogamy | 1.85E-03 |
| 65 | GO:0016444: somatic cell DNA recombination | 2.22E-03 |
| 66 | GO:0009955: adaxial/abaxial pattern specification | 2.22E-03 |
| 67 | GO:0001522: pseudouridine synthesis | 3.02E-03 |
| 68 | GO:0000028: ribosomal small subunit assembly | 3.02E-03 |
| 69 | GO:0001558: regulation of cell growth | 3.46E-03 |
| 70 | GO:0043562: cellular response to nitrogen levels | 3.46E-03 |
| 71 | GO:0006002: fructose 6-phosphate metabolic process | 3.46E-03 |
| 72 | GO:0001510: RNA methylation | 3.46E-03 |
| 73 | GO:0007338: single fertilization | 3.91E-03 |
| 74 | GO:0048507: meristem development | 3.91E-03 |
| 75 | GO:0006259: DNA metabolic process | 4.87E-03 |
| 76 | GO:0006879: cellular iron ion homeostasis | 5.38E-03 |
| 77 | GO:0012501: programmed cell death | 5.91E-03 |
| 78 | GO:0006820: anion transport | 5.91E-03 |
| 79 | GO:0006446: regulation of translational initiation | 7.02E-03 |
| 80 | GO:0009553: embryo sac development | 8.73E-03 |
| 81 | GO:0006487: protein N-linked glycosylation | 8.81E-03 |
| 82 | GO:0000027: ribosomal large subunit assembly | 8.81E-03 |
| 83 | GO:0051302: regulation of cell division | 9.44E-03 |
| 84 | GO:0006334: nucleosome assembly | 1.01E-02 |
| 85 | GO:0016226: iron-sulfur cluster assembly | 1.08E-02 |
| 86 | GO:0071215: cellular response to abscisic acid stimulus | 1.14E-02 |
| 87 | GO:0006413: translational initiation | 1.45E-02 |
| 88 | GO:0009749: response to glucose | 1.58E-02 |
| 89 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.63E-02 |
| 90 | GO:0006635: fatty acid beta-oxidation | 1.66E-02 |
| 91 | GO:0009567: double fertilization forming a zygote and endosperm | 1.90E-02 |
| 92 | GO:0042128: nitrate assimilation | 2.33E-02 |
| 93 | GO:0016049: cell growth | 2.51E-02 |
| 94 | GO:0010311: lateral root formation | 2.70E-02 |
| 95 | GO:0006457: protein folding | 2.78E-02 |
| 96 | GO:0006811: ion transport | 2.79E-02 |
| 97 | GO:0048527: lateral root development | 2.89E-02 |
| 98 | GO:0010043: response to zinc ion | 2.89E-02 |
| 99 | GO:0009631: cold acclimation | 2.89E-02 |
| 100 | GO:0000724: double-strand break repair via homologous recombination | 2.99E-02 |
| 101 | GO:0009651: response to salt stress | 3.07E-02 |
| 102 | GO:0008283: cell proliferation | 3.69E-02 |
| 103 | GO:0009744: response to sucrose | 3.69E-02 |
| 104 | GO:0000154: rRNA modification | 4.01E-02 |
| 105 | GO:0006417: regulation of translation | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050355: triphosphatase activity | 0.00E+00 |
| 2 | GO:0034513: box H/ACA snoRNA binding | 0.00E+00 |
| 3 | GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity | 0.00E+00 |
| 4 | GO:0003735: structural constituent of ribosome | 9.45E-31 |
| 5 | GO:0003746: translation elongation factor activity | 2.70E-13 |
| 6 | GO:0003723: RNA binding | 1.18E-12 |
| 7 | GO:0044183: protein binding involved in protein folding | 9.47E-10 |
| 8 | GO:0003729: mRNA binding | 4.49E-09 |
| 9 | GO:0030515: snoRNA binding | 1.23E-06 |
| 10 | GO:0019843: rRNA binding | 1.30E-06 |
| 11 | GO:0051082: unfolded protein binding | 1.33E-05 |
| 12 | GO:0015157: oligosaccharide transmembrane transporter activity | 1.69E-04 |
| 13 | GO:1990259: histone-glutamine methyltransferase activity | 1.69E-04 |
| 14 | GO:0035614: snRNA stem-loop binding | 1.69E-04 |
| 15 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.69E-04 |
| 16 | GO:0004828: serine-tRNA ligase activity | 1.69E-04 |
| 17 | GO:0004679: AMP-activated protein kinase activity | 1.69E-04 |
| 18 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.07E-04 |
| 19 | GO:0050897: cobalt ion binding | 3.72E-04 |
| 20 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 3.83E-04 |
| 21 | GO:0043141: ATP-dependent 5'-3' DNA helicase activity | 3.83E-04 |
| 22 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 3.83E-04 |
| 23 | GO:0030619: U1 snRNA binding | 3.83E-04 |
| 24 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 3.83E-04 |
| 25 | GO:0036455: iron-sulfur transferase activity | 3.83E-04 |
| 26 | GO:0003938: IMP dehydrogenase activity | 3.83E-04 |
| 27 | GO:0070034: telomerase RNA binding | 3.83E-04 |
| 28 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 3.83E-04 |
| 29 | GO:0005078: MAP-kinase scaffold activity | 3.83E-04 |
| 30 | GO:0008649: rRNA methyltransferase activity | 6.25E-04 |
| 31 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 6.25E-04 |
| 32 | GO:0008469: histone-arginine N-methyltransferase activity | 6.25E-04 |
| 33 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 6.25E-04 |
| 34 | GO:0032947: protein complex scaffold | 6.25E-04 |
| 35 | GO:0004407: histone deacetylase activity | 6.49E-04 |
| 36 | GO:0000166: nucleotide binding | 1.11E-03 |
| 37 | GO:0008198: ferrous iron binding | 1.50E-03 |
| 38 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.50E-03 |
| 39 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.85E-03 |
| 40 | GO:0031369: translation initiation factor binding | 1.85E-03 |
| 41 | GO:0005507: copper ion binding | 2.06E-03 |
| 42 | GO:0019887: protein kinase regulator activity | 2.22E-03 |
| 43 | GO:0008235: metalloexopeptidase activity | 2.61E-03 |
| 44 | GO:0003872: 6-phosphofructokinase activity | 2.61E-03 |
| 45 | GO:0043022: ribosome binding | 3.02E-03 |
| 46 | GO:0015288: porin activity | 3.02E-03 |
| 47 | GO:0003743: translation initiation factor activity | 3.16E-03 |
| 48 | GO:0008173: RNA methyltransferase activity | 3.46E-03 |
| 49 | GO:0008135: translation factor activity, RNA binding | 3.46E-03 |
| 50 | GO:0008308: voltage-gated anion channel activity | 3.46E-03 |
| 51 | GO:0003678: DNA helicase activity | 3.91E-03 |
| 52 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.15E-03 |
| 53 | GO:0001055: RNA polymerase II activity | 4.38E-03 |
| 54 | GO:0001054: RNA polymerase I activity | 5.38E-03 |
| 55 | GO:0001056: RNA polymerase III activity | 5.91E-03 |
| 56 | GO:0009982: pseudouridine synthase activity | 6.46E-03 |
| 57 | GO:0015266: protein channel activity | 6.46E-03 |
| 58 | GO:0051087: chaperone binding | 9.44E-03 |
| 59 | GO:0004176: ATP-dependent peptidase activity | 1.01E-02 |
| 60 | GO:0004812: aminoacyl-tRNA ligase activity | 1.28E-02 |
| 61 | GO:0010181: FMN binding | 1.51E-02 |
| 62 | GO:0005524: ATP binding | 1.67E-02 |
| 63 | GO:0004004: ATP-dependent RNA helicase activity | 2.42E-02 |
| 64 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.51E-02 |
| 65 | GO:0008236: serine-type peptidase activity | 2.51E-02 |
| 66 | GO:0042393: histone binding | 3.38E-02 |
| 67 | GO:0005525: GTP binding | 3.74E-02 |
| 68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.91E-02 |
| 69 | GO:0005198: structural molecule activity | 4.01E-02 |
| 70 | GO:0003924: GTPase activity | 4.41E-02 |
| 71 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.57E-02 |
| 72 | GO:0008234: cysteine-type peptidase activity | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090661: box H/ACA telomerase RNP complex | 0.00E+00 |
| 2 | GO:0072589: box H/ACA scaRNP complex | 0.00E+00 |
| 3 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 4 | GO:0005829: cytosol | 6.79E-20 |
| 5 | GO:0005730: nucleolus | 2.95E-19 |
| 6 | GO:0022626: cytosolic ribosome | 4.79E-19 |
| 7 | GO:0022627: cytosolic small ribosomal subunit | 9.78E-16 |
| 8 | GO:0005840: ribosome | 9.01E-15 |
| 9 | GO:0022625: cytosolic large ribosomal subunit | 4.61E-13 |
| 10 | GO:0015934: large ribosomal subunit | 5.86E-10 |
| 11 | GO:0009506: plasmodesma | 2.60E-07 |
| 12 | GO:0005759: mitochondrial matrix | 2.61E-06 |
| 13 | GO:0005774: vacuolar membrane | 3.92E-06 |
| 14 | GO:0005853: eukaryotic translation elongation factor 1 complex | 5.12E-06 |
| 15 | GO:0005737: cytoplasm | 9.33E-06 |
| 16 | GO:0005739: mitochondrion | 1.17E-05 |
| 17 | GO:0032040: small-subunit processome | 1.17E-05 |
| 18 | GO:0015935: small ribosomal subunit | 4.29E-05 |
| 19 | GO:0031428: box C/D snoRNP complex | 5.33E-05 |
| 20 | GO:0005681: spliceosomal complex | 1.23E-04 |
| 21 | GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex | 1.69E-04 |
| 22 | GO:0030686: 90S preribosome | 1.69E-04 |
| 23 | GO:0015030: Cajal body | 2.33E-04 |
| 24 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.19E-04 |
| 25 | GO:0005618: cell wall | 5.73E-04 |
| 26 | GO:0031429: box H/ACA snoRNP complex | 8.93E-04 |
| 27 | GO:0005834: heterotrimeric G-protein complex | 1.12E-03 |
| 28 | GO:0005773: vacuole | 1.22E-03 |
| 29 | GO:0005732: small nucleolar ribonucleoprotein complex | 1.45E-03 |
| 30 | GO:0008250: oligosaccharyltransferase complex | 1.50E-03 |
| 31 | GO:0005743: mitochondrial inner membrane | 1.81E-03 |
| 32 | GO:0016282: eukaryotic 43S preinitiation complex | 1.85E-03 |
| 33 | GO:0033290: eukaryotic 48S preinitiation complex | 2.22E-03 |
| 34 | GO:0016272: prefoldin complex | 2.22E-03 |
| 35 | GO:0005688: U6 snRNP | 3.02E-03 |
| 36 | GO:0046930: pore complex | 3.46E-03 |
| 37 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 3.46E-03 |
| 38 | GO:0005742: mitochondrial outer membrane translocase complex | 3.46E-03 |
| 39 | GO:0005736: DNA-directed RNA polymerase I complex | 3.91E-03 |
| 40 | GO:0005685: U1 snRNP | 3.91E-03 |
| 41 | GO:0005666: DNA-directed RNA polymerase III complex | 4.38E-03 |
| 42 | GO:0000418: DNA-directed RNA polymerase IV complex | 4.87E-03 |
| 43 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.07E-03 |
| 44 | GO:0048471: perinuclear region of cytoplasm | 5.38E-03 |
| 45 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.91E-03 |
| 46 | GO:0019013: viral nucleocapsid | 6.46E-03 |
| 47 | GO:0016020: membrane | 6.97E-03 |
| 48 | GO:0005747: mitochondrial respiratory chain complex I | 7.72E-03 |
| 49 | GO:0000419: DNA-directed RNA polymerase V complex | 8.20E-03 |
| 50 | GO:0005758: mitochondrial intermembrane space | 8.81E-03 |
| 51 | GO:0005741: mitochondrial outer membrane | 1.01E-02 |
| 52 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.21E-02 |
| 53 | GO:0030529: intracellular ribonucleoprotein complex | 2.16E-02 |
| 54 | GO:0009507: chloroplast | 2.84E-02 |