GO Enrichment Analysis of Co-expressed Genes with
AT1G03660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006983: ER overload response | 0.00E+00 |
| 2 | GO:0001881: receptor recycling | 0.00E+00 |
| 3 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.54E-08 |
| 4 | GO:0030163: protein catabolic process | 4.04E-05 |
| 5 | GO:0031540: regulation of anthocyanin biosynthetic process | 4.65E-05 |
| 6 | GO:1990542: mitochondrial transmembrane transport | 8.78E-05 |
| 7 | GO:0051788: response to misfolded protein | 2.08E-04 |
| 8 | GO:0043066: negative regulation of apoptotic process | 2.08E-04 |
| 9 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.08E-04 |
| 10 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.82E-04 |
| 11 | GO:0008333: endosome to lysosome transport | 3.48E-04 |
| 12 | GO:0009410: response to xenobiotic stimulus | 3.48E-04 |
| 13 | GO:0046686: response to cadmium ion | 3.94E-04 |
| 14 | GO:0009743: response to carbohydrate | 5.01E-04 |
| 15 | GO:0009647: skotomorphogenesis | 5.01E-04 |
| 16 | GO:0006168: adenine salvage | 5.01E-04 |
| 17 | GO:0071786: endoplasmic reticulum tubular network organization | 5.01E-04 |
| 18 | GO:0006882: cellular zinc ion homeostasis | 5.01E-04 |
| 19 | GO:0001676: long-chain fatty acid metabolic process | 5.01E-04 |
| 20 | GO:0046513: ceramide biosynthetic process | 5.01E-04 |
| 21 | GO:0006166: purine ribonucleoside salvage | 5.01E-04 |
| 22 | GO:0010971: positive regulation of G2/M transition of mitotic cell cycle | 5.01E-04 |
| 23 | GO:0048442: sepal development | 6.66E-04 |
| 24 | GO:0010387: COP9 signalosome assembly | 6.66E-04 |
| 25 | GO:0006536: glutamate metabolic process | 6.66E-04 |
| 26 | GO:0097428: protein maturation by iron-sulfur cluster transfer | 8.44E-04 |
| 27 | GO:0044209: AMP salvage | 8.44E-04 |
| 28 | GO:0045116: protein neddylation | 8.44E-04 |
| 29 | GO:0043248: proteasome assembly | 1.03E-03 |
| 30 | GO:1901001: negative regulation of response to salt stress | 1.23E-03 |
| 31 | GO:0000338: protein deneddylation | 1.44E-03 |
| 32 | GO:0048528: post-embryonic root development | 1.44E-03 |
| 33 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.66E-03 |
| 34 | GO:0009690: cytokinin metabolic process | 1.66E-03 |
| 35 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.89E-03 |
| 36 | GO:0010100: negative regulation of photomorphogenesis | 1.89E-03 |
| 37 | GO:0007389: pattern specification process | 1.89E-03 |
| 38 | GO:0010093: specification of floral organ identity | 1.89E-03 |
| 39 | GO:0048589: developmental growth | 2.14E-03 |
| 40 | GO:0046685: response to arsenic-containing substance | 2.14E-03 |
| 41 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.39E-03 |
| 42 | GO:0071577: zinc II ion transmembrane transport | 2.39E-03 |
| 43 | GO:0048441: petal development | 2.65E-03 |
| 44 | GO:0043069: negative regulation of programmed cell death | 2.65E-03 |
| 45 | GO:0048829: root cap development | 2.65E-03 |
| 46 | GO:0010072: primary shoot apical meristem specification | 2.93E-03 |
| 47 | GO:0000038: very long-chain fatty acid metabolic process | 2.93E-03 |
| 48 | GO:0006790: sulfur compound metabolic process | 3.21E-03 |
| 49 | GO:0007034: vacuolar transport | 3.80E-03 |
| 50 | GO:0010167: response to nitrate | 4.10E-03 |
| 51 | GO:0046854: phosphatidylinositol phosphorylation | 4.10E-03 |
| 52 | GO:0009863: salicylic acid mediated signaling pathway | 4.74E-03 |
| 53 | GO:0010187: negative regulation of seed germination | 4.74E-03 |
| 54 | GO:0006289: nucleotide-excision repair | 4.74E-03 |
| 55 | GO:0009116: nucleoside metabolic process | 4.74E-03 |
| 56 | GO:0009814: defense response, incompatible interaction | 5.76E-03 |
| 57 | GO:0042147: retrograde transport, endosome to Golgi | 6.86E-03 |
| 58 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 7.11E-03 |
| 59 | GO:0034220: ion transmembrane transport | 7.24E-03 |
| 60 | GO:0010154: fruit development | 7.62E-03 |
| 61 | GO:0010183: pollen tube guidance | 8.42E-03 |
| 62 | GO:0048825: cotyledon development | 8.42E-03 |
| 63 | GO:0006623: protein targeting to vacuole | 8.42E-03 |
| 64 | GO:0010193: response to ozone | 8.83E-03 |
| 65 | GO:0006914: autophagy | 1.01E-02 |
| 66 | GO:0016579: protein deubiquitination | 1.10E-02 |
| 67 | GO:0048366: leaf development | 1.16E-02 |
| 68 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.28E-02 |
| 69 | GO:0009817: defense response to fungus, incompatible interaction | 1.38E-02 |
| 70 | GO:0048767: root hair elongation | 1.43E-02 |
| 71 | GO:0009407: toxin catabolic process | 1.48E-02 |
| 72 | GO:0010043: response to zinc ion | 1.53E-02 |
| 73 | GO:0009867: jasmonic acid mediated signaling pathway | 1.63E-02 |
| 74 | GO:0045087: innate immune response | 1.63E-02 |
| 75 | GO:0009853: photorespiration | 1.63E-02 |
| 76 | GO:0030001: metal ion transport | 1.79E-02 |
| 77 | GO:0009408: response to heat | 1.81E-02 |
| 78 | GO:0006631: fatty acid metabolic process | 1.84E-02 |
| 79 | GO:0009640: photomorphogenesis | 1.95E-02 |
| 80 | GO:0051707: response to other organism | 1.95E-02 |
| 81 | GO:0009636: response to toxic substance | 2.12E-02 |
| 82 | GO:0031347: regulation of defense response | 2.24E-02 |
| 83 | GO:0009846: pollen germination | 2.29E-02 |
| 84 | GO:0009585: red, far-red light phototransduction | 2.41E-02 |
| 85 | GO:0009736: cytokinin-activated signaling pathway | 2.41E-02 |
| 86 | GO:0009734: auxin-activated signaling pathway | 2.55E-02 |
| 87 | GO:0006810: transport | 2.56E-02 |
| 88 | GO:0009626: plant-type hypersensitive response | 2.84E-02 |
| 89 | GO:0009742: brassinosteroid mediated signaling pathway | 3.23E-02 |
| 90 | GO:0006413: translational initiation | 4.35E-02 |
| 91 | GO:0009793: embryo development ending in seed dormancy | 4.48E-02 |
| 92 | GO:0007623: circadian rhythm | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016881: acid-amino acid ligase activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 9.18E-12 |
| 3 | GO:0008233: peptidase activity | 6.86E-08 |
| 4 | GO:0019786: Atg8-specific protease activity | 8.78E-05 |
| 5 | GO:0047326: inositol tetrakisphosphate 5-kinase activity | 8.78E-05 |
| 6 | GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity | 8.78E-05 |
| 7 | GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity | 8.78E-05 |
| 8 | GO:0000824: inositol tetrakisphosphate 3-kinase activity | 8.78E-05 |
| 9 | GO:0019779: Atg8 activating enzyme activity | 2.08E-04 |
| 10 | GO:0018708: thiol S-methyltransferase activity | 2.08E-04 |
| 11 | GO:0050291: sphingosine N-acyltransferase activity | 2.08E-04 |
| 12 | GO:0019781: NEDD8 activating enzyme activity | 2.08E-04 |
| 13 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 3.48E-04 |
| 14 | GO:0003999: adenine phosphoribosyltransferase activity | 5.01E-04 |
| 15 | GO:0035198: miRNA binding | 5.01E-04 |
| 16 | GO:0004351: glutamate decarboxylase activity | 5.01E-04 |
| 17 | GO:0017077: oxidative phosphorylation uncoupler activity | 5.01E-04 |
| 18 | GO:0070628: proteasome binding | 6.66E-04 |
| 19 | GO:0019776: Atg8 ligase activity | 6.66E-04 |
| 20 | GO:0008641: small protein activating enzyme activity | 8.44E-04 |
| 21 | GO:0031593: polyubiquitin binding | 1.03E-03 |
| 22 | GO:0102391: decanoate--CoA ligase activity | 1.23E-03 |
| 23 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.23E-03 |
| 24 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.23E-03 |
| 25 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.44E-03 |
| 26 | GO:0045309: protein phosphorylated amino acid binding | 2.39E-03 |
| 27 | GO:0004722: protein serine/threonine phosphatase activity | 2.69E-03 |
| 28 | GO:0019904: protein domain specific binding | 2.93E-03 |
| 29 | GO:0008327: methyl-CpG binding | 2.93E-03 |
| 30 | GO:0003712: transcription cofactor activity | 4.10E-03 |
| 31 | GO:0031418: L-ascorbic acid binding | 4.74E-03 |
| 32 | GO:0005385: zinc ion transmembrane transporter activity | 4.74E-03 |
| 33 | GO:0043130: ubiquitin binding | 4.74E-03 |
| 34 | GO:0046873: metal ion transmembrane transporter activity | 7.62E-03 |
| 35 | GO:0008536: Ran GTPase binding | 7.62E-03 |
| 36 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 8.83E-03 |
| 37 | GO:0003684: damaged DNA binding | 1.01E-02 |
| 38 | GO:0008237: metallopeptidase activity | 1.05E-02 |
| 39 | GO:0015250: water channel activity | 1.14E-02 |
| 40 | GO:0005515: protein binding | 1.49E-02 |
| 41 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.63E-02 |
| 42 | GO:0003746: translation elongation factor activity | 1.63E-02 |
| 43 | GO:0004364: glutathione transferase activity | 1.90E-02 |
| 44 | GO:0005198: structural molecule activity | 2.12E-02 |
| 45 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.41E-02 |
| 46 | GO:0022857: transmembrane transporter activity | 2.97E-02 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.71E-02 |
| 48 | GO:0030170: pyridoxal phosphate binding | 3.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005674: transcription factor TFIIF complex | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 4.09E-12 |
| 3 | GO:0005839: proteasome core complex | 9.18E-12 |
| 4 | GO:0019773: proteasome core complex, alpha-subunit complex | 5.65E-07 |
| 5 | GO:0005829: cytosol | 8.86E-06 |
| 6 | GO:0009510: plasmodesmatal desmotubule | 8.78E-05 |
| 7 | GO:0046861: glyoxysomal membrane | 3.48E-04 |
| 8 | GO:0005789: endoplasmic reticulum membrane | 3.79E-04 |
| 9 | GO:0071782: endoplasmic reticulum tubular network | 5.01E-04 |
| 10 | GO:0005775: vacuolar lumen | 5.01E-04 |
| 11 | GO:0005776: autophagosome | 6.66E-04 |
| 12 | GO:0005783: endoplasmic reticulum | 7.55E-04 |
| 13 | GO:0005794: Golgi apparatus | 9.30E-04 |
| 14 | GO:0005771: multivesicular body | 1.03E-03 |
| 15 | GO:0030904: retromer complex | 1.03E-03 |
| 16 | GO:0000421: autophagosome membrane | 1.66E-03 |
| 17 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.66E-03 |
| 18 | GO:0031902: late endosome membrane | 1.79E-03 |
| 19 | GO:0009514: glyoxysome | 1.89E-03 |
| 20 | GO:0008180: COP9 signalosome | 2.14E-03 |
| 21 | GO:0031090: organelle membrane | 2.14E-03 |
| 22 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.93E-03 |
| 23 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.21E-03 |
| 24 | GO:0000419: DNA-directed RNA polymerase V complex | 4.42E-03 |
| 25 | GO:0031410: cytoplasmic vesicle | 5.76E-03 |
| 26 | GO:0022626: cytosolic ribosome | 6.09E-03 |
| 27 | GO:0009504: cell plate | 8.42E-03 |
| 28 | GO:0016592: mediator complex | 9.24E-03 |
| 29 | GO:0005802: trans-Golgi network | 1.17E-02 |
| 30 | GO:0005788: endoplasmic reticulum lumen | 1.19E-02 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 1.38E-02 |
| 32 | GO:0005768: endosome | 1.38E-02 |
| 33 | GO:0015934: large ribosomal subunit | 1.53E-02 |
| 34 | GO:0005634: nucleus | 1.75E-02 |
| 35 | GO:0090406: pollen tube | 1.95E-02 |
| 36 | GO:0005774: vacuolar membrane | 2.33E-02 |
| 37 | GO:0005635: nuclear envelope | 2.53E-02 |
| 38 | GO:0009506: plasmodesma | 2.60E-02 |
| 39 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.30E-02 |