GO Enrichment Analysis of Co-expressed Genes with
AT1G03630
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
5 | GO:0015979: photosynthesis | 1.86E-14 |
6 | GO:0010207: photosystem II assembly | 2.70E-09 |
7 | GO:0006006: glucose metabolic process | 1.94E-07 |
8 | GO:0010027: thylakoid membrane organization | 2.82E-07 |
9 | GO:0042549: photosystem II stabilization | 3.88E-07 |
10 | GO:0018298: protein-chromophore linkage | 5.87E-07 |
11 | GO:0035304: regulation of protein dephosphorylation | 1.29E-06 |
12 | GO:0018026: peptidyl-lysine monomethylation | 1.29E-06 |
13 | GO:0010206: photosystem II repair | 3.56E-06 |
14 | GO:0090391: granum assembly | 4.78E-06 |
15 | GO:0010205: photoinhibition | 4.86E-06 |
16 | GO:0019253: reductive pentose-phosphate cycle | 1.65E-05 |
17 | GO:0009765: photosynthesis, light harvesting | 2.06E-05 |
18 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.38E-05 |
19 | GO:0010196: nonphotochemical quenching | 9.33E-05 |
20 | GO:0009658: chloroplast organization | 1.11E-04 |
21 | GO:0006096: glycolytic process | 1.11E-04 |
22 | GO:0048564: photosystem I assembly | 1.20E-04 |
23 | GO:0032544: plastid translation | 1.50E-04 |
24 | GO:0000481: maturation of 5S rRNA | 1.62E-04 |
25 | GO:1904964: positive regulation of phytol biosynthetic process | 1.62E-04 |
26 | GO:0065002: intracellular protein transmembrane transport | 1.62E-04 |
27 | GO:0043686: co-translational protein modification | 1.62E-04 |
28 | GO:1902458: positive regulation of stomatal opening | 1.62E-04 |
29 | GO:0034337: RNA folding | 1.62E-04 |
30 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.62E-04 |
31 | GO:0006419: alanyl-tRNA aminoacylation | 1.62E-04 |
32 | GO:0043953: protein transport by the Tat complex | 1.62E-04 |
33 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.62E-04 |
34 | GO:0015995: chlorophyll biosynthetic process | 2.49E-04 |
35 | GO:0009773: photosynthetic electron transport in photosystem I | 3.02E-04 |
36 | GO:0019684: photosynthesis, light reaction | 3.02E-04 |
37 | GO:0009073: aromatic amino acid family biosynthetic process | 3.02E-04 |
38 | GO:0006729: tetrahydrobiopterin biosynthetic process | 3.69E-04 |
39 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.69E-04 |
40 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.69E-04 |
41 | GO:0019388: galactose catabolic process | 3.69E-04 |
42 | GO:0010020: chloroplast fission | 4.47E-04 |
43 | GO:0071492: cellular response to UV-A | 6.04E-04 |
44 | GO:0005977: glycogen metabolic process | 6.04E-04 |
45 | GO:0061077: chaperone-mediated protein folding | 7.44E-04 |
46 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 8.63E-04 |
47 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.63E-04 |
48 | GO:0009067: aspartate family amino acid biosynthetic process | 8.63E-04 |
49 | GO:0071484: cellular response to light intensity | 8.63E-04 |
50 | GO:0009590: detection of gravity | 8.63E-04 |
51 | GO:0010021: amylopectin biosynthetic process | 1.14E-03 |
52 | GO:0071486: cellular response to high light intensity | 1.14E-03 |
53 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.14E-03 |
54 | GO:0006109: regulation of carbohydrate metabolic process | 1.14E-03 |
55 | GO:0015994: chlorophyll metabolic process | 1.14E-03 |
56 | GO:0006552: leucine catabolic process | 1.14E-03 |
57 | GO:0006546: glycine catabolic process | 1.14E-03 |
58 | GO:0019252: starch biosynthetic process | 1.37E-03 |
59 | GO:0010236: plastoquinone biosynthetic process | 1.45E-03 |
60 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.45E-03 |
61 | GO:0031365: N-terminal protein amino acid modification | 1.45E-03 |
62 | GO:0006564: L-serine biosynthetic process | 1.45E-03 |
63 | GO:0042793: transcription from plastid promoter | 1.78E-03 |
64 | GO:0010189: vitamin E biosynthetic process | 2.14E-03 |
65 | GO:0009088: threonine biosynthetic process | 2.14E-03 |
66 | GO:1901259: chloroplast rRNA processing | 2.14E-03 |
67 | GO:0009772: photosynthetic electron transport in photosystem II | 2.52E-03 |
68 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.52E-03 |
69 | GO:0009645: response to low light intensity stimulus | 2.52E-03 |
70 | GO:0022904: respiratory electron transport chain | 2.52E-03 |
71 | GO:0006400: tRNA modification | 2.52E-03 |
72 | GO:0016311: dephosphorylation | 2.60E-03 |
73 | GO:2000070: regulation of response to water deprivation | 2.91E-03 |
74 | GO:0000105: histidine biosynthetic process | 2.91E-03 |
75 | GO:0009231: riboflavin biosynthetic process | 2.91E-03 |
76 | GO:0016559: peroxisome fission | 2.91E-03 |
77 | GO:0005978: glycogen biosynthetic process | 2.91E-03 |
78 | GO:0009642: response to light intensity | 2.91E-03 |
79 | GO:0030091: protein repair | 2.91E-03 |
80 | GO:0032508: DNA duplex unwinding | 2.91E-03 |
81 | GO:0006412: translation | 2.94E-03 |
82 | GO:0010218: response to far red light | 3.01E-03 |
83 | GO:0017004: cytochrome complex assembly | 3.33E-03 |
84 | GO:0015996: chlorophyll catabolic process | 3.33E-03 |
85 | GO:0007186: G-protein coupled receptor signaling pathway | 3.33E-03 |
86 | GO:0009637: response to blue light | 3.46E-03 |
87 | GO:0006754: ATP biosynthetic process | 3.77E-03 |
88 | GO:0006098: pentose-phosphate shunt | 3.77E-03 |
89 | GO:0055114: oxidation-reduction process | 4.13E-03 |
90 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.22E-03 |
91 | GO:0009416: response to light stimulus | 4.44E-03 |
92 | GO:0010114: response to red light | 4.45E-03 |
93 | GO:0009744: response to sucrose | 4.45E-03 |
94 | GO:0006949: syncytium formation | 4.69E-03 |
95 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.69E-03 |
96 | GO:0009644: response to high light intensity | 4.81E-03 |
97 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.19E-03 |
98 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.19E-03 |
99 | GO:0043085: positive regulation of catalytic activity | 5.19E-03 |
100 | GO:0005983: starch catabolic process | 5.69E-03 |
101 | GO:0045037: protein import into chloroplast stroma | 5.69E-03 |
102 | GO:0009409: response to cold | 5.89E-03 |
103 | GO:0006094: gluconeogenesis | 6.22E-03 |
104 | GO:0009767: photosynthetic electron transport chain | 6.22E-03 |
105 | GO:0009266: response to temperature stimulus | 6.76E-03 |
106 | GO:0006302: double-strand break repair | 6.76E-03 |
107 | GO:0046686: response to cadmium ion | 7.52E-03 |
108 | GO:0000162: tryptophan biosynthetic process | 7.90E-03 |
109 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.90E-03 |
110 | GO:0009269: response to desiccation | 9.72E-03 |
111 | GO:0051321: meiotic cell cycle | 9.72E-03 |
112 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.10E-02 |
113 | GO:0010182: sugar mediated signaling pathway | 1.38E-02 |
114 | GO:0048868: pollen tube development | 1.38E-02 |
115 | GO:0006662: glycerol ether metabolic process | 1.38E-02 |
116 | GO:0015986: ATP synthesis coupled proton transport | 1.45E-02 |
117 | GO:0009646: response to absence of light | 1.45E-02 |
118 | GO:0009451: RNA modification | 1.51E-02 |
119 | GO:0009791: post-embryonic development | 1.52E-02 |
120 | GO:0071554: cell wall organization or biogenesis | 1.60E-02 |
121 | GO:0002229: defense response to oomycetes | 1.60E-02 |
122 | GO:0010193: response to ozone | 1.60E-02 |
123 | GO:0009735: response to cytokinin | 1.68E-02 |
124 | GO:0009828: plant-type cell wall loosening | 1.83E-02 |
125 | GO:0009567: double fertilization forming a zygote and endosperm | 1.83E-02 |
126 | GO:0006810: transport | 2.30E-02 |
127 | GO:0005975: carbohydrate metabolic process | 2.41E-02 |
128 | GO:0009817: defense response to fungus, incompatible interaction | 2.51E-02 |
129 | GO:0009813: flavonoid biosynthetic process | 2.60E-02 |
130 | GO:0080167: response to karrikin | 2.84E-02 |
131 | GO:0009867: jasmonic acid mediated signaling pathway | 2.97E-02 |
132 | GO:0034599: cellular response to oxidative stress | 3.06E-02 |
133 | GO:0006631: fatty acid metabolic process | 3.35E-02 |
134 | GO:0045454: cell redox homeostasis | 3.40E-02 |
135 | GO:0032259: methylation | 4.01E-02 |
136 | GO:0009664: plant-type cell wall organization | 4.18E-02 |
137 | GO:0009793: embryo development ending in seed dormancy | 4.45E-02 |
138 | GO:0010224: response to UV-B | 4.50E-02 |
139 | GO:0042742: defense response to bacterium | 4.52E-02 |
140 | GO:0043086: negative regulation of catalytic activity | 4.94E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
2 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
3 | GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity | 0.00E+00 |
4 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
5 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
6 | GO:0010242: oxygen evolving activity | 0.00E+00 |
7 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
8 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 0.00E+00 |
9 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
10 | GO:0048039: ubiquinone binding | 0.00E+00 |
11 | GO:0016168: chlorophyll binding | 3.29E-07 |
12 | GO:0019843: rRNA binding | 1.11E-06 |
13 | GO:0008266: poly(U) RNA binding | 1.65E-05 |
14 | GO:0016279: protein-lysine N-methyltransferase activity | 2.06E-05 |
15 | GO:0031409: pigment binding | 2.42E-05 |
16 | GO:0005528: FK506 binding | 2.87E-05 |
17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.28E-05 |
18 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.62E-04 |
19 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.62E-04 |
20 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.62E-04 |
21 | GO:0050308: sugar-phosphatase activity | 1.62E-04 |
22 | GO:0004813: alanine-tRNA ligase activity | 1.62E-04 |
23 | GO:0042586: peptide deformylase activity | 1.62E-04 |
24 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.62E-04 |
25 | GO:0019203: carbohydrate phosphatase activity | 1.62E-04 |
26 | GO:0045157: electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity | 1.62E-04 |
27 | GO:0016597: amino acid binding | 1.84E-04 |
28 | GO:0047746: chlorophyllase activity | 3.69E-04 |
29 | GO:0042389: omega-3 fatty acid desaturase activity | 3.69E-04 |
30 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.69E-04 |
31 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.69E-04 |
32 | GO:0004614: phosphoglucomutase activity | 3.69E-04 |
33 | GO:0019156: isoamylase activity | 3.69E-04 |
34 | GO:0003993: acid phosphatase activity | 4.14E-04 |
35 | GO:0042802: identical protein binding | 5.54E-04 |
36 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.04E-04 |
37 | GO:0004324: ferredoxin-NADP+ reductase activity | 6.04E-04 |
38 | GO:0003913: DNA photolyase activity | 6.04E-04 |
39 | GO:0005504: fatty acid binding | 6.04E-04 |
40 | GO:0051287: NAD binding | 6.88E-04 |
41 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 8.63E-04 |
42 | GO:0004072: aspartate kinase activity | 8.63E-04 |
43 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 8.63E-04 |
44 | GO:0016851: magnesium chelatase activity | 8.63E-04 |
45 | GO:0022891: substrate-specific transmembrane transporter activity | 8.83E-04 |
46 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.14E-03 |
47 | GO:0080032: methyl jasmonate esterase activity | 1.14E-03 |
48 | GO:0045430: chalcone isomerase activity | 1.14E-03 |
49 | GO:0043495: protein anchor | 1.14E-03 |
50 | GO:0003959: NADPH dehydrogenase activity | 1.45E-03 |
51 | GO:2001070: starch binding | 1.78E-03 |
52 | GO:0080030: methyl indole-3-acetate esterase activity | 1.78E-03 |
53 | GO:0004332: fructose-bisphosphate aldolase activity | 1.78E-03 |
54 | GO:0042578: phosphoric ester hydrolase activity | 1.78E-03 |
55 | GO:0004556: alpha-amylase activity | 1.78E-03 |
56 | GO:0008195: phosphatidate phosphatase activity | 2.14E-03 |
57 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 2.14E-03 |
58 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.14E-03 |
59 | GO:0009881: photoreceptor activity | 2.52E-03 |
60 | GO:0019899: enzyme binding | 2.52E-03 |
61 | GO:0030145: manganese ion binding | 3.16E-03 |
62 | GO:0008135: translation factor activity, RNA binding | 3.33E-03 |
63 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.33E-03 |
64 | GO:0003746: translation elongation factor activity | 3.46E-03 |
65 | GO:0003735: structural constituent of ribosome | 3.49E-03 |
66 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.77E-03 |
67 | GO:0050661: NADP binding | 3.93E-03 |
68 | GO:0030234: enzyme regulator activity | 4.69E-03 |
69 | GO:0008047: enzyme activator activity | 4.69E-03 |
70 | GO:0000049: tRNA binding | 5.69E-03 |
71 | GO:0031072: heat shock protein binding | 6.22E-03 |
72 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.76E-03 |
73 | GO:0004857: enzyme inhibitor activity | 8.48E-03 |
74 | GO:0003924: GTPase activity | 9.08E-03 |
75 | GO:0008408: 3'-5' exonuclease activity | 9.72E-03 |
76 | GO:0004519: endonuclease activity | 1.01E-02 |
77 | GO:0005509: calcium ion binding | 1.14E-02 |
78 | GO:0003756: protein disulfide isomerase activity | 1.17E-02 |
79 | GO:0047134: protein-disulfide reductase activity | 1.24E-02 |
80 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.38E-02 |
81 | GO:0004791: thioredoxin-disulfide reductase activity | 1.45E-02 |
82 | GO:0048038: quinone binding | 1.60E-02 |
83 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.75E-02 |
84 | GO:0008483: transaminase activity | 1.91E-02 |
85 | GO:0016491: oxidoreductase activity | 1.95E-02 |
86 | GO:0016413: O-acetyltransferase activity | 1.99E-02 |
87 | GO:0000287: magnesium ion binding | 2.25E-02 |
88 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.42E-02 |
89 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.26E-02 |
90 | GO:0005525: GTP binding | 3.50E-02 |
91 | GO:0004722: protein serine/threonine phosphatase activity | 3.73E-02 |
92 | GO:0005198: structural molecule activity | 3.86E-02 |
93 | GO:0003723: RNA binding | 4.72E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009349: riboflavin synthase complex | 0.00E+00 |
2 | GO:0017133: mitochondrial electron transfer flavoprotein complex | 0.00E+00 |
3 | GO:0043235: receptor complex | 0.00E+00 |
4 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
5 | GO:0009507: chloroplast | 2.32E-69 |
6 | GO:0009535: chloroplast thylakoid membrane | 1.05E-45 |
7 | GO:0009570: chloroplast stroma | 2.84E-35 |
8 | GO:0009579: thylakoid | 4.63E-29 |
9 | GO:0009534: chloroplast thylakoid | 5.24E-29 |
10 | GO:0009941: chloroplast envelope | 5.29E-27 |
11 | GO:0009543: chloroplast thylakoid lumen | 6.22E-16 |
12 | GO:0030095: chloroplast photosystem II | 6.69E-16 |
13 | GO:0031977: thylakoid lumen | 2.72E-11 |
14 | GO:0010287: plastoglobule | 1.25E-09 |
15 | GO:0009523: photosystem II | 8.22E-08 |
16 | GO:0009654: photosystem II oxygen evolving complex | 7.24E-07 |
17 | GO:0009538: photosystem I reaction center | 1.72E-06 |
18 | GO:0019898: extrinsic component of membrane | 3.89E-06 |
19 | GO:0010319: stromule | 7.86E-06 |
20 | GO:0048046: apoplast | 2.20E-05 |
21 | GO:0009522: photosystem I | 9.53E-05 |
22 | GO:0031361: integral component of thylakoid membrane | 1.62E-04 |
23 | GO:0000791: euchromatin | 1.62E-04 |
24 | GO:0009783: photosystem II antenna complex | 1.62E-04 |
25 | GO:0009515: granal stacked thylakoid | 1.62E-04 |
26 | GO:0031969: chloroplast membrane | 1.72E-04 |
27 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.84E-04 |
28 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.69E-04 |
29 | GO:0030870: Mre11 complex | 3.69E-04 |
30 | GO:0030076: light-harvesting complex | 5.00E-04 |
31 | GO:0009528: plastid inner membrane | 6.04E-04 |
32 | GO:0010007: magnesium chelatase complex | 6.04E-04 |
33 | GO:0033281: TAT protein transport complex | 6.04E-04 |
34 | GO:0042651: thylakoid membrane | 6.78E-04 |
35 | GO:0009532: plastid stroma | 7.44E-04 |
36 | GO:0042646: plastid nucleoid | 8.63E-04 |
37 | GO:0005960: glycine cleavage complex | 8.63E-04 |
38 | GO:0005840: ribosome | 9.87E-04 |
39 | GO:0009544: chloroplast ATP synthase complex | 1.14E-03 |
40 | GO:0009527: plastid outer membrane | 1.14E-03 |
41 | GO:0009517: PSII associated light-harvesting complex II | 1.14E-03 |
42 | GO:0016020: membrane | 1.29E-03 |
43 | GO:0055035: plastid thylakoid membrane | 1.45E-03 |
44 | GO:0000795: synaptonemal complex | 1.45E-03 |
45 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.78E-03 |
46 | GO:0009533: chloroplast stromal thylakoid | 2.52E-03 |
47 | GO:0009707: chloroplast outer membrane | 2.74E-03 |
48 | GO:0031305: integral component of mitochondrial inner membrane | 2.91E-03 |
49 | GO:0042644: chloroplast nucleoid | 3.77E-03 |
50 | GO:0005740: mitochondrial envelope | 4.69E-03 |
51 | GO:0032040: small-subunit processome | 5.69E-03 |
52 | GO:0009508: plastid chromosome | 6.22E-03 |
53 | GO:0000312: plastid small ribosomal subunit | 6.76E-03 |
54 | GO:0015935: small ribosomal subunit | 9.72E-03 |
55 | GO:0000785: chromatin | 1.67E-02 |
56 | GO:0009536: plastid | 1.76E-02 |
57 | GO:0009295: nucleoid | 1.91E-02 |
58 | GO:0015934: large ribosomal subunit | 2.78E-02 |