GO Enrichment Analysis of Co-expressed Genes with
AT1G03310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019447: D-cysteine catabolic process | 0.00E+00 |
| 2 | GO:0005997: xylulose metabolic process | 0.00E+00 |
| 3 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 4 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:0098586: cellular response to virus | 0.00E+00 |
| 7 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 8 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 9 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 10 | GO:0000256: allantoin catabolic process | 5.49E-07 |
| 11 | GO:0010136: ureide catabolic process | 2.08E-06 |
| 12 | GO:0006145: purine nucleobase catabolic process | 4.93E-06 |
| 13 | GO:0009902: chloroplast relocation | 9.35E-06 |
| 14 | GO:0015979: photosynthesis | 5.94E-05 |
| 15 | GO:0051775: response to redox state | 1.02E-04 |
| 16 | GO:0071277: cellular response to calcium ion | 1.02E-04 |
| 17 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.02E-04 |
| 18 | GO:1904964: positive regulation of phytol biosynthetic process | 1.02E-04 |
| 19 | GO:0042371: vitamin K biosynthetic process | 1.02E-04 |
| 20 | GO:0043087: regulation of GTPase activity | 1.02E-04 |
| 21 | GO:0010028: xanthophyll cycle | 1.02E-04 |
| 22 | GO:0006419: alanyl-tRNA aminoacylation | 1.02E-04 |
| 23 | GO:0010362: negative regulation of anion channel activity by blue light | 1.02E-04 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 1.02E-04 |
| 25 | GO:0033388: putrescine biosynthetic process from arginine | 1.02E-04 |
| 26 | GO:0018298: protein-chromophore linkage | 1.19E-04 |
| 27 | GO:0007623: circadian rhythm | 1.33E-04 |
| 28 | GO:0010020: chloroplast fission | 2.37E-04 |
| 29 | GO:0009446: putrescine biosynthetic process | 2.40E-04 |
| 30 | GO:0016122: xanthophyll metabolic process | 2.40E-04 |
| 31 | GO:0042853: L-alanine catabolic process | 2.40E-04 |
| 32 | GO:0046741: transport of virus in host, tissue to tissue | 2.40E-04 |
| 33 | GO:0009915: phloem sucrose loading | 2.40E-04 |
| 34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.40E-04 |
| 35 | GO:0042548: regulation of photosynthesis, light reaction | 2.40E-04 |
| 36 | GO:0006435: threonyl-tRNA aminoacylation | 2.40E-04 |
| 37 | GO:0055114: oxidation-reduction process | 4.64E-04 |
| 38 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.73E-04 |
| 39 | GO:0043572: plastid fission | 5.73E-04 |
| 40 | GO:0006020: inositol metabolic process | 5.73E-04 |
| 41 | GO:0006107: oxaloacetate metabolic process | 5.73E-04 |
| 42 | GO:0051016: barbed-end actin filament capping | 5.73E-04 |
| 43 | GO:0006021: inositol biosynthetic process | 7.62E-04 |
| 44 | GO:0006734: NADH metabolic process | 7.62E-04 |
| 45 | GO:0015994: chlorophyll metabolic process | 7.62E-04 |
| 46 | GO:0016558: protein import into peroxisome matrix | 9.62E-04 |
| 47 | GO:0071805: potassium ion transmembrane transport | 1.02E-03 |
| 48 | GO:0046855: inositol phosphate dephosphorylation | 1.17E-03 |
| 49 | GO:0009643: photosynthetic acclimation | 1.17E-03 |
| 50 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.17E-03 |
| 51 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.17E-03 |
| 52 | GO:0010189: vitamin E biosynthetic process | 1.40E-03 |
| 53 | GO:0071470: cellular response to osmotic stress | 1.40E-03 |
| 54 | GO:0006400: tRNA modification | 1.65E-03 |
| 55 | GO:0009853: photorespiration | 1.85E-03 |
| 56 | GO:0009658: chloroplast organization | 1.88E-03 |
| 57 | GO:0009704: de-etiolation | 1.90E-03 |
| 58 | GO:0016559: peroxisome fission | 1.90E-03 |
| 59 | GO:0048564: photosystem I assembly | 1.90E-03 |
| 60 | GO:0017004: cytochrome complex assembly | 2.17E-03 |
| 61 | GO:0009932: cell tip growth | 2.17E-03 |
| 62 | GO:0009657: plastid organization | 2.17E-03 |
| 63 | GO:0009821: alkaloid biosynthetic process | 2.45E-03 |
| 64 | GO:0090333: regulation of stomatal closure | 2.45E-03 |
| 65 | GO:0046686: response to cadmium ion | 2.45E-03 |
| 66 | GO:0006754: ATP biosynthetic process | 2.45E-03 |
| 67 | GO:0000373: Group II intron splicing | 2.45E-03 |
| 68 | GO:0098656: anion transmembrane transport | 2.45E-03 |
| 69 | GO:0009644: response to high light intensity | 2.57E-03 |
| 70 | GO:0009638: phototropism | 2.74E-03 |
| 71 | GO:0006949: syncytium formation | 3.05E-03 |
| 72 | GO:0006259: DNA metabolic process | 3.05E-03 |
| 73 | GO:0006813: potassium ion transport | 3.19E-03 |
| 74 | GO:0006265: DNA topological change | 3.36E-03 |
| 75 | GO:0006790: sulfur compound metabolic process | 3.69E-03 |
| 76 | GO:0006807: nitrogen compound metabolic process | 4.02E-03 |
| 77 | GO:0006108: malate metabolic process | 4.02E-03 |
| 78 | GO:0006006: glucose metabolic process | 4.02E-03 |
| 79 | GO:0005986: sucrose biosynthetic process | 4.02E-03 |
| 80 | GO:0019253: reductive pentose-phosphate cycle | 4.37E-03 |
| 81 | GO:0010207: photosystem II assembly | 4.37E-03 |
| 82 | GO:0009266: response to temperature stimulus | 4.37E-03 |
| 83 | GO:0046854: phosphatidylinositol phosphorylation | 4.72E-03 |
| 84 | GO:0009793: embryo development ending in seed dormancy | 4.89E-03 |
| 85 | GO:0006833: water transport | 5.09E-03 |
| 86 | GO:0080147: root hair cell development | 5.46E-03 |
| 87 | GO:0051302: regulation of cell division | 5.85E-03 |
| 88 | GO:0008299: isoprenoid biosynthetic process | 5.85E-03 |
| 89 | GO:0007017: microtubule-based process | 5.85E-03 |
| 90 | GO:0009058: biosynthetic process | 5.97E-03 |
| 91 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.06E-03 |
| 92 | GO:0009693: ethylene biosynthetic process | 7.06E-03 |
| 93 | GO:0006413: translational initiation | 7.28E-03 |
| 94 | GO:0009451: RNA modification | 7.99E-03 |
| 95 | GO:0034220: ion transmembrane transport | 8.35E-03 |
| 96 | GO:0010118: stomatal movement | 8.35E-03 |
| 97 | GO:0006606: protein import into nucleus | 8.35E-03 |
| 98 | GO:0048868: pollen tube development | 8.80E-03 |
| 99 | GO:0007059: chromosome segregation | 9.26E-03 |
| 100 | GO:0019252: starch biosynthetic process | 9.73E-03 |
| 101 | GO:0009791: post-embryonic development | 9.73E-03 |
| 102 | GO:0010193: response to ozone | 1.02E-02 |
| 103 | GO:0000302: response to reactive oxygen species | 1.02E-02 |
| 104 | GO:0006635: fatty acid beta-oxidation | 1.02E-02 |
| 105 | GO:0055085: transmembrane transport | 1.13E-02 |
| 106 | GO:0009828: plant-type cell wall loosening | 1.17E-02 |
| 107 | GO:0000160: phosphorelay signal transduction system | 1.65E-02 |
| 108 | GO:0006811: ion transport | 1.71E-02 |
| 109 | GO:0009637: response to blue light | 1.89E-02 |
| 110 | GO:0034599: cellular response to oxidative stress | 1.95E-02 |
| 111 | GO:0006099: tricarboxylic acid cycle | 1.95E-02 |
| 112 | GO:0006631: fatty acid metabolic process | 2.13E-02 |
| 113 | GO:0010114: response to red light | 2.26E-02 |
| 114 | GO:0031347: regulation of defense response | 2.59E-02 |
| 115 | GO:0009664: plant-type cell wall organization | 2.66E-02 |
| 116 | GO:0006364: rRNA processing | 2.80E-02 |
| 117 | GO:0009585: red, far-red light phototransduction | 2.80E-02 |
| 118 | GO:0010224: response to UV-B | 2.86E-02 |
| 119 | GO:0006417: regulation of translation | 3.01E-02 |
| 120 | GO:0006096: glycolytic process | 3.15E-02 |
| 121 | GO:0006810: transport | 3.31E-02 |
| 122 | GO:0005975: carbohydrate metabolic process | 3.45E-02 |
| 123 | GO:0009553: embryo sac development | 3.52E-02 |
| 124 | GO:0009624: response to nematode | 3.59E-02 |
| 125 | GO:0009735: response to cytokinin | 3.60E-02 |
| 126 | GO:0006396: RNA processing | 3.67E-02 |
| 127 | GO:0009416: response to light stimulus | 3.93E-02 |
| 128 | GO:0035556: intracellular signal transduction | 4.15E-02 |
| 129 | GO:0009845: seed germination | 4.46E-02 |
| 130 | GO:0009790: embryo development | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity | 0.00E+00 |
| 2 | GO:0019148: D-cysteine desulfhydrase activity | 0.00E+00 |
| 3 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 4 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0050126: N-carbamoylputrescine amidase activity | 0.00E+00 |
| 6 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 7 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 8 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 9 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 10 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 11 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 12 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 13 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 14 | GO:0042623: ATPase activity, coupled | 0.00E+00 |
| 15 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 16 | GO:0008453: alanine-glyoxylate transaminase activity | 9.35E-06 |
| 17 | GO:0004856: xylulokinase activity | 1.02E-04 |
| 18 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.02E-04 |
| 19 | GO:0035671: enone reductase activity | 1.02E-04 |
| 20 | GO:0004451: isocitrate lyase activity | 1.02E-04 |
| 21 | GO:0047958: glycine:2-oxoglutarate aminotransferase activity | 1.02E-04 |
| 22 | GO:0004813: alanine-tRNA ligase activity | 1.02E-04 |
| 23 | GO:0004829: threonine-tRNA ligase activity | 2.40E-04 |
| 24 | GO:0019172: glyoxalase III activity | 2.40E-04 |
| 25 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.40E-04 |
| 26 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.40E-04 |
| 27 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.40E-04 |
| 28 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.40E-04 |
| 29 | GO:0015079: potassium ion transmembrane transporter activity | 3.67E-04 |
| 30 | GO:0050307: sucrose-phosphate phosphatase activity | 3.99E-04 |
| 31 | GO:0004751: ribose-5-phosphate isomerase activity | 3.99E-04 |
| 32 | GO:0030267: glyoxylate reductase (NADP) activity | 3.99E-04 |
| 33 | GO:0070402: NADPH binding | 3.99E-04 |
| 34 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.99E-04 |
| 35 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.99E-04 |
| 36 | GO:0004848: ureidoglycolate hydrolase activity | 3.99E-04 |
| 37 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.99E-04 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 4.81E-04 |
| 39 | GO:0016851: magnesium chelatase activity | 5.73E-04 |
| 40 | GO:0009882: blue light photoreceptor activity | 5.73E-04 |
| 41 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 5.73E-04 |
| 42 | GO:0016853: isomerase activity | 7.02E-04 |
| 43 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 7.62E-04 |
| 44 | GO:0009011: starch synthase activity | 7.62E-04 |
| 45 | GO:0043495: protein anchor | 7.62E-04 |
| 46 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 9.62E-04 |
| 47 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 9.62E-04 |
| 48 | GO:0004462: lactoylglutathione lyase activity | 1.17E-03 |
| 49 | GO:0016615: malate dehydrogenase activity | 1.17E-03 |
| 50 | GO:0000293: ferric-chelate reductase activity | 1.17E-03 |
| 51 | GO:0016168: chlorophyll binding | 1.20E-03 |
| 52 | GO:0016887: ATPase activity | 1.37E-03 |
| 53 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.40E-03 |
| 54 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.40E-03 |
| 55 | GO:0030060: L-malate dehydrogenase activity | 1.40E-03 |
| 56 | GO:0042802: identical protein binding | 1.47E-03 |
| 57 | GO:0019899: enzyme binding | 1.65E-03 |
| 58 | GO:0050897: cobalt ion binding | 1.69E-03 |
| 59 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.17E-03 |
| 60 | GO:0008135: translation factor activity, RNA binding | 2.17E-03 |
| 61 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 2.45E-03 |
| 62 | GO:0016844: strictosidine synthase activity | 2.74E-03 |
| 63 | GO:0051287: NAD binding | 2.87E-03 |
| 64 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.36E-03 |
| 65 | GO:0000049: tRNA binding | 3.69E-03 |
| 66 | GO:0008081: phosphoric diester hydrolase activity | 4.02E-03 |
| 67 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.02E-03 |
| 68 | GO:0031072: heat shock protein binding | 4.02E-03 |
| 69 | GO:0000155: phosphorelay sensor kinase activity | 4.02E-03 |
| 70 | GO:0003924: GTPase activity | 4.05E-03 |
| 71 | GO:0016491: oxidoreductase activity | 7.45E-03 |
| 72 | GO:0003727: single-stranded RNA binding | 7.48E-03 |
| 73 | GO:0008514: organic anion transmembrane transporter activity | 7.48E-03 |
| 74 | GO:0010181: FMN binding | 9.26E-03 |
| 75 | GO:0046872: metal ion binding | 1.16E-02 |
| 76 | GO:0008237: metallopeptidase activity | 1.22E-02 |
| 77 | GO:0008483: transaminase activity | 1.22E-02 |
| 78 | GO:0016597: amino acid binding | 1.27E-02 |
| 79 | GO:0015250: water channel activity | 1.32E-02 |
| 80 | GO:0005525: GTP binding | 1.58E-02 |
| 81 | GO:0005096: GTPase activator activity | 1.65E-02 |
| 82 | GO:0030145: manganese ion binding | 1.77E-02 |
| 83 | GO:0003746: translation elongation factor activity | 1.89E-02 |
| 84 | GO:0050661: NADP binding | 2.07E-02 |
| 85 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.39E-02 |
| 86 | GO:0043621: protein self-association | 2.39E-02 |
| 87 | GO:0035091: phosphatidylinositol binding | 2.39E-02 |
| 88 | GO:0004519: endonuclease activity | 2.42E-02 |
| 89 | GO:0003779: actin binding | 3.52E-02 |
| 90 | GO:0051082: unfolded protein binding | 3.59E-02 |
| 91 | GO:0019843: rRNA binding | 4.22E-02 |
| 92 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.30E-02 |
| 93 | GO:0016829: lyase activity | 4.46E-02 |
| 94 | GO:0030170: pyridoxal phosphate binding | 4.54E-02 |
| 95 | GO:0005524: ATP binding | 4.74E-02 |
| 96 | GO:0008565: protein transporter activity | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.38E-27 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 3.33E-12 |
| 3 | GO:0009570: chloroplast stroma | 4.82E-11 |
| 4 | GO:0009941: chloroplast envelope | 5.51E-08 |
| 5 | GO:0042651: thylakoid membrane | 1.21E-05 |
| 6 | GO:0009706: chloroplast inner membrane | 4.88E-05 |
| 7 | GO:0009534: chloroplast thylakoid | 7.20E-05 |
| 8 | GO:0009707: chloroplast outer membrane | 1.19E-04 |
| 9 | GO:0008290: F-actin capping protein complex | 2.40E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 3.99E-04 |
| 11 | GO:0009579: thylakoid | 4.48E-04 |
| 12 | GO:0042646: plastid nucleoid | 5.73E-04 |
| 13 | GO:0010287: plastoglobule | 6.87E-04 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 7.34E-04 |
| 15 | GO:0009523: photosystem II | 7.51E-04 |
| 16 | GO:0030286: dynein complex | 7.62E-04 |
| 17 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 7.62E-04 |
| 18 | GO:0048046: apoplast | 9.32E-04 |
| 19 | GO:0016363: nuclear matrix | 1.40E-03 |
| 20 | GO:0005777: peroxisome | 2.07E-03 |
| 21 | GO:0031977: thylakoid lumen | 2.19E-03 |
| 22 | GO:0009574: preprophase band | 4.02E-03 |
| 23 | GO:0005578: proteinaceous extracellular matrix | 4.02E-03 |
| 24 | GO:0030095: chloroplast photosystem II | 4.37E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 5.85E-03 |
| 26 | GO:0019898: extrinsic component of membrane | 9.73E-03 |
| 27 | GO:0005778: peroxisomal membrane | 1.22E-02 |
| 28 | GO:0010319: stromule | 1.22E-02 |
| 29 | GO:0009295: nucleoid | 1.22E-02 |
| 30 | GO:0005739: mitochondrion | 1.44E-02 |
| 31 | GO:0009505: plant-type cell wall | 2.72E-02 |
| 32 | GO:0005747: mitochondrial respiratory chain complex I | 3.22E-02 |
| 33 | GO:0005623: cell | 4.30E-02 |
| 34 | GO:0005759: mitochondrial matrix | 4.95E-02 |