Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G02780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046085: adenosine metabolic process0.00E+00
2GO:0000740: nuclear membrane fusion0.00E+00
3GO:0048870: cell motility0.00E+00
4GO:0032211: negative regulation of telomere maintenance via telomerase0.00E+00
5GO:0015822: ornithine transport0.00E+00
6GO:0006412: translation7.15E-60
7GO:0042254: ribosome biogenesis4.31E-22
8GO:0000027: ribosomal large subunit assembly4.25E-07
9GO:0009853: photorespiration3.12E-06
10GO:0000028: ribosomal small subunit assembly2.20E-05
11GO:1902626: assembly of large subunit precursor of preribosome3.12E-05
12GO:0006165: nucleoside diphosphate phosphorylation6.74E-05
13GO:0006228: UTP biosynthetic process6.74E-05
14GO:0006241: CTP biosynthetic process6.74E-05
15GO:0015986: ATP synthesis coupled proton transport6.88E-05
16GO:0006183: GTP biosynthetic process1.18E-04
17GO:0006120: mitochondrial electron transport, NADH to ubiquinone3.46E-04
18GO:0009955: adaxial/abaxial pattern specification3.46E-04
19GO:0031468: nuclear envelope reassembly4.53E-04
20GO:0000066: mitochondrial ornithine transport4.53E-04
21GO:2001006: regulation of cellulose biosynthetic process4.53E-04
22GO:0009240: isopentenyl diphosphate biosynthetic process4.53E-04
23GO:0009965: leaf morphogenesis7.18E-04
24GO:0098656: anion transmembrane transport8.12E-04
25GO:0009245: lipid A biosynthetic process8.12E-04
26GO:0006511: ubiquitin-dependent protein catabolic process8.26E-04
27GO:0000387: spliceosomal snRNP assembly9.56E-04
28GO:0016560: protein import into peroxisome matrix, docking9.79E-04
29GO:0007163: establishment or maintenance of cell polarity9.79E-04
30GO:0006432: phenylalanyl-tRNA aminoacylation9.79E-04
31GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation9.79E-04
32GO:0045905: positive regulation of translational termination9.79E-04
33GO:0071668: plant-type cell wall assembly9.79E-04
34GO:0050992: dimethylallyl diphosphate biosynthetic process9.79E-04
35GO:0045901: positive regulation of translational elongation9.79E-04
36GO:0006452: translational frameshifting9.79E-04
37GO:0010198: synergid death9.79E-04
38GO:0010090: trichome morphogenesis9.96E-04
39GO:0009651: response to salt stress1.15E-03
40GO:0010015: root morphogenesis1.28E-03
41GO:0006820: anion transport1.47E-03
42GO:0070919: production of siRNA involved in chromatin silencing by small RNA1.59E-03
43GO:0002181: cytoplasmic translation1.59E-03
44GO:0046417: chorismate metabolic process1.59E-03
45GO:0015940: pantothenate biosynthetic process1.59E-03
46GO:0045793: positive regulation of cell size1.59E-03
47GO:0006760: folic acid-containing compound metabolic process1.59E-03
48GO:0034227: tRNA thio-modification1.59E-03
49GO:0060145: viral gene silencing in virus induced gene silencing1.59E-03
50GO:0007030: Golgi organization2.11E-03
51GO:0010039: response to iron ion2.11E-03
52GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.31E-03
53GO:0006168: adenine salvage2.31E-03
54GO:0009558: embryo sac cellularization2.31E-03
55GO:0032877: positive regulation of DNA endoreduplication2.31E-03
56GO:0006166: purine ribonucleoside salvage2.31E-03
57GO:0070301: cellular response to hydrogen peroxide2.31E-03
58GO:0051085: chaperone mediated protein folding requiring cofactor2.31E-03
59GO:0006107: oxaloacetate metabolic process2.31E-03
60GO:0006487: protein N-linked glycosylation2.61E-03
61GO:0009116: nucleoside metabolic process2.61E-03
62GO:0006099: tricarboxylic acid cycle2.70E-03
63GO:0006221: pyrimidine nucleotide biosynthetic process3.10E-03
64GO:0006625: protein targeting to peroxisome3.10E-03
65GO:0032366: intracellular sterol transport3.10E-03
66GO:0044205: 'de novo' UMP biosynthetic process3.10E-03
67GO:0009165: nucleotide biosynthetic process3.10E-03
68GO:0051781: positive regulation of cell division3.10E-03
69GO:0010387: COP9 signalosome assembly3.10E-03
70GO:0010363: regulation of plant-type hypersensitive response3.10E-03
71GO:0015992: proton transport3.17E-03
72GO:0016226: iron-sulfur cluster assembly3.47E-03
73GO:0045454: cell redox homeostasis3.58E-03
74GO:0030041: actin filament polymerization3.98E-03
75GO:0044209: AMP salvage3.98E-03
76GO:0015991: ATP hydrolysis coupled proton transport4.82E-03
77GO:0043248: proteasome assembly4.92E-03
78GO:0006662: glycerol ether metabolic process5.20E-03
79GO:0051603: proteolysis involved in cellular protein catabolic process5.40E-03
80GO:0000054: ribosomal subunit export from nucleus5.94E-03
81GO:0000911: cytokinesis by cell plate formation5.94E-03
82GO:0046686: response to cadmium ion6.13E-03
83GO:0009793: embryo development ending in seed dormancy6.23E-03
84GO:0000338: protein deneddylation7.03E-03
85GO:0006826: iron ion transport7.03E-03
86GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process7.03E-03
87GO:0022904: respiratory electron transport chain7.03E-03
88GO:0035196: production of miRNAs involved in gene silencing by miRNA7.03E-03
89GO:0032880: regulation of protein localization7.03E-03
90GO:0009690: cytokinin metabolic process8.18E-03
91GO:0050821: protein stabilization8.18E-03
92GO:0045010: actin nucleation8.18E-03
93GO:0009231: riboflavin biosynthetic process8.18E-03
94GO:0009808: lignin metabolic process9.38E-03
95GO:0006414: translational elongation9.62E-03
96GO:0000398: mRNA splicing, via spliceosome9.75E-03
97GO:0006754: ATP biosynthetic process1.07E-02
98GO:0048589: developmental growth1.07E-02
99GO:0009060: aerobic respiration1.07E-02
100GO:0000902: cell morphogenesis1.07E-02
101GO:0010267: production of ta-siRNAs involved in RNA interference1.20E-02
102GO:0009735: response to cytokinin1.20E-02
103GO:0000103: sulfate assimilation1.34E-02
104GO:0043069: negative regulation of programmed cell death1.34E-02
105GO:0010043: response to zinc ion1.41E-02
106GO:0006913: nucleocytoplasmic transport1.48E-02
107GO:0072593: reactive oxygen species metabolic process1.48E-02
108GO:0009073: aromatic amino acid family biosynthetic process1.48E-02
109GO:0030148: sphingolipid biosynthetic process1.48E-02
110GO:0034599: cellular response to oxidative stress1.62E-02
111GO:0016925: protein sumoylation1.63E-02
112GO:0006839: mitochondrial transport1.77E-02
113GO:0010102: lateral root morphogenesis1.79E-02
114GO:0006626: protein targeting to mitochondrion1.79E-02
115GO:0006807: nitrogen compound metabolic process1.79E-02
116GO:0006108: malate metabolic process1.79E-02
117GO:0006094: gluconeogenesis1.79E-02
118GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.88E-02
119GO:0002237: response to molecule of bacterial origin1.95E-02
120GO:0048467: gynoecium development1.95E-02
121GO:0008283: cell proliferation2.00E-02
122GO:0009926: auxin polar transport2.00E-02
123GO:0007031: peroxisome organization2.12E-02
124GO:0034976: response to endoplasmic reticulum stress2.29E-02
125GO:0006406: mRNA export from nucleus2.46E-02
126GO:0006289: nucleotide-excision repair2.46E-02
127GO:0008299: isoprenoid biosynthetic process2.64E-02
128GO:0010431: seed maturation2.82E-02
129GO:0061077: chaperone-mediated protein folding2.82E-02
130GO:0007005: mitochondrion organization3.01E-02
131GO:0006012: galactose metabolic process3.20E-02
132GO:0010089: xylem development3.40E-02
133GO:0016569: covalent chromatin modification3.62E-02
134GO:0034220: ion transmembrane transport3.81E-02
135GO:0000413: protein peptidyl-prolyl isomerization3.81E-02
136GO:0006606: protein import into nucleus3.81E-02
137GO:0010197: polar nucleus fusion4.01E-02
138GO:0051726: regulation of cell cycle4.07E-02
139GO:0061025: membrane fusion4.23E-02
140GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.66E-02
141GO:0009630: gravitropism4.88E-02
RankGO TermAdjusted P value
1GO:0050152: omega-amidase activity0.00E+00
2GO:0004746: riboflavin synthase activity0.00E+00
3GO:0004151: dihydroorotase activity0.00E+00
4GO:0004056: argininosuccinate lyase activity0.00E+00
5GO:0003735: structural constituent of ribosome1.84E-80
6GO:0003729: mRNA binding2.25E-17
7GO:0004298: threonine-type endopeptidase activity1.73E-08
8GO:0019843: rRNA binding7.93E-06
9GO:0050897: cobalt ion binding3.67E-05
10GO:0046933: proton-transporting ATP synthase activity, rotational mechanism5.97E-05
11GO:0004550: nucleoside diphosphate kinase activity6.74E-05
12GO:0008097: 5S rRNA binding6.74E-05
13GO:0004576: oligosaccharyl transferase activity1.18E-04
14GO:0008233: peptidase activity1.35E-04
15GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.82E-04
16GO:0031177: phosphopantetheine binding2.58E-04
17GO:0000035: acyl binding3.46E-04
18GO:0004452: isopentenyl-diphosphate delta-isomerase activity4.53E-04
19GO:0047560: 3-dehydrosphinganine reductase activity4.53E-04
20GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity4.53E-04
21GO:0015288: porin activity5.55E-04
22GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process5.55E-04
23GO:0008308: voltage-gated anion channel activity6.77E-04
24GO:0008137: NADH dehydrogenase (ubiquinone) activity8.46E-04
25GO:0000064: L-ornithine transmembrane transporter activity9.79E-04
26GO:1990585: hydroxyproline O-arabinosyltransferase activity9.79E-04
27GO:0004826: phenylalanine-tRNA ligase activity9.79E-04
28GO:0004106: chorismate mutase activity9.79E-04
29GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity9.79E-04
30GO:0004129: cytochrome-c oxidase activity1.28E-03
31GO:0070181: small ribosomal subunit rRNA binding1.59E-03
32GO:0032403: protein complex binding1.59E-03
33GO:0008649: rRNA methyltransferase activity1.59E-03
34GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.59E-03
35GO:0070180: large ribosomal subunit rRNA binding1.59E-03
36GO:0005047: signal recognition particle binding1.59E-03
37GO:0015035: protein disulfide oxidoreductase activity1.69E-03
38GO:0003999: adenine phosphoribosyltransferase activity2.31E-03
39GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.31E-03
40GO:0004749: ribose phosphate diphosphokinase activity2.31E-03
41GO:0000254: C-4 methylsterol oxidase activity2.31E-03
42GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds3.10E-03
43GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances3.10E-03
44GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor3.10E-03
45GO:0010011: auxin binding3.10E-03
46GO:0051537: 2 iron, 2 sulfur cluster binding3.90E-03
47GO:0016651: oxidoreductase activity, acting on NAD(P)H3.98E-03
48GO:0005496: steroid binding3.98E-03
49GO:0031386: protein tag3.98E-03
50GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.30E-03
51GO:0047134: protein-disulfide reductase activity4.46E-03
52GO:0051117: ATPase binding4.92E-03
53GO:0004791: thioredoxin-disulfide reductase activity5.60E-03
54GO:0008143: poly(A) binding7.03E-03
55GO:0042162: telomeric DNA binding7.03E-03
56GO:0008121: ubiquinol-cytochrome-c reductase activity7.03E-03
57GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.33E-03
58GO:0022857: transmembrane transporter activity7.51E-03
59GO:0043022: ribosome binding8.18E-03
60GO:0035064: methylated histone binding8.18E-03
61GO:0004034: aldose 1-epimerase activity8.18E-03
62GO:0001055: RNA polymerase II activity1.20E-02
63GO:0008047: enzyme activator activity1.34E-02
64GO:0008794: arsenate reductase (glutaredoxin) activity1.48E-02
65GO:0046961: proton-transporting ATPase activity, rotational mechanism1.48E-02
66GO:0001054: RNA polymerase I activity1.48E-02
67GO:0003746: translation elongation factor activity1.55E-02
68GO:0000049: tRNA binding1.63E-02
69GO:0001056: RNA polymerase III activity1.63E-02
70GO:0003725: double-stranded RNA binding1.79E-02
71GO:0004089: carbonate dehydratase activity1.79E-02
72GO:0031072: heat shock protein binding1.79E-02
73GO:0008266: poly(U) RNA binding1.95E-02
74GO:0043130: ubiquitin binding2.46E-02
75GO:0005528: FK506 binding2.46E-02
76GO:0051087: chaperone binding2.64E-02
77GO:0004540: ribonuclease activity2.82E-02
78GO:0003756: protein disulfide isomerase activity3.40E-02
79GO:0005102: receptor binding3.60E-02
80GO:0004872: receptor activity4.44E-02
RankGO TermAdjusted P value
1GO:0097361: CIA complex0.00E+00
2GO:0016469: proton-transporting two-sector ATPase complex0.00E+00
3GO:0043186: P granule0.00E+00
4GO:0005675: holo TFIIH complex0.00E+00
5GO:0005840: ribosome4.16E-59
6GO:0022626: cytosolic ribosome3.66E-55
7GO:0022625: cytosolic large ribosomal subunit3.41E-48
8GO:0022627: cytosolic small ribosomal subunit8.20E-31
9GO:0005829: cytosol2.47E-25
10GO:0005730: nucleolus5.03E-21
11GO:0005737: cytoplasm4.13E-18
12GO:0005747: mitochondrial respiratory chain complex I1.32E-11
13GO:0005774: vacuolar membrane1.82E-11
14GO:0000502: proteasome complex2.83E-09
15GO:0045271: respiratory chain complex I1.24E-08
16GO:0005839: proteasome core complex1.73E-08
17GO:0009506: plasmodesma1.78E-08
18GO:0016020: membrane2.62E-08
19GO:0005773: vacuole3.45E-08
20GO:0005753: mitochondrial proton-transporting ATP synthase complex2.27E-07
21GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.29E-06
22GO:0015934: large ribosomal subunit2.35E-06
23GO:0031966: mitochondrial membrane1.30E-05
24GO:0045273: respiratory chain complex II2.20E-05
25GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)2.20E-05
26GO:0019773: proteasome core complex, alpha-subunit complex3.12E-05
27GO:0005739: mitochondrion7.25E-05
28GO:0008250: oligosaccharyltransferase complex1.82E-04
29GO:0005758: mitochondrial intermembrane space2.60E-04
30GO:0005732: small nucleolar ribonucleoprotein complex3.60E-04
31GO:0009536: plastid4.17E-04
32GO:1990429: peroxisomal importomer complex4.53E-04
33GO:0046930: pore complex6.77E-04
34GO:0005618: cell wall8.04E-04
35GO:0071011: precatalytic spliceosome9.56E-04
36GO:0005697: telomerase holoenzyme complex9.79E-04
37GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain9.79E-04
38GO:0071013: catalytic step 2 spliceosome1.28E-03
39GO:0009507: chloroplast1.31E-03
40GO:0034719: SMN-Sm protein complex1.59E-03
41GO:0005853: eukaryotic translation elongation factor 1 complex1.59E-03
42GO:0000439: core TFIIH complex1.59E-03
43GO:0019013: viral nucleocapsid1.67E-03
44GO:1990726: Lsm1-7-Pat1 complex2.31E-03
45GO:0070469: respiratory chain2.88E-03
46GO:0005682: U5 snRNP3.10E-03
47GO:0016471: vacuolar proton-transporting V-type ATPase complex3.10E-03
48GO:0015935: small ribosomal subunit3.17E-03
49GO:0005741: mitochondrial outer membrane3.17E-03
50GO:0005687: U4 snRNP3.98E-03
51GO:0097526: spliceosomal tri-snRNP complex3.98E-03
52GO:0005746: mitochondrial respiratory chain3.98E-03
53GO:0031209: SCAR complex4.92E-03
54GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)4.92E-03
55GO:0005762: mitochondrial large ribosomal subunit5.94E-03
56GO:0005801: cis-Golgi network5.94E-03
57GO:0005689: U12-type spliceosomal complex5.94E-03
58GO:0071004: U2-type prespliceosome8.18E-03
59GO:0005688: U6 snRNP8.18E-03
60GO:0005742: mitochondrial outer membrane translocase complex9.38E-03
61GO:0046540: U4/U6 x U5 tri-snRNP complex9.38E-03
62GO:0005788: endoplasmic reticulum lumen9.87E-03
63GO:0005685: U1 snRNP1.07E-02
64GO:0008180: COP9 signalosome1.07E-02
65GO:0005763: mitochondrial small ribosomal subunit1.07E-02
66GO:0005736: DNA-directed RNA polymerase I complex1.07E-02
67GO:0005666: DNA-directed RNA polymerase III complex1.20E-02
68GO:0005686: U2 snRNP1.34E-02
69GO:0005886: plasma membrane1.37E-02
70GO:0000325: plant-type vacuole1.41E-02
71GO:0005759: mitochondrial matrix1.45E-02
72GO:0008541: proteasome regulatory particle, lid subcomplex1.48E-02
73GO:0005665: DNA-directed RNA polymerase II, core complex1.63E-02
74GO:0005743: mitochondrial inner membrane1.63E-02
75GO:0009508: plastid chromosome1.79E-02
76GO:0005750: mitochondrial respiratory chain complex III1.95E-02
77GO:0005783: endoplasmic reticulum2.23E-02
78GO:0000419: DNA-directed RNA polymerase V complex2.29E-02
79GO:0009543: chloroplast thylakoid lumen4.80E-02
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Gene type



Gene DE type