co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G65010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0034970: histone H3-R2 methylation	0.00E+00
2	GO:0046719: regulation by virus of viral protein levels in host cell	0.00E+00
3	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
4	GO:0018131: oxazole or thiazole biosynthetic process	0.00E+00
5	GO:0034972: histone H3-R26 methylation	0.00E+00
6	GO:0009606: tropism	0.00E+00
7	GO:1901698: response to nitrogen compound	0.00E+00
8	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
9	GO:0007638: mechanosensory behavior	0.00E+00
10	GO:0035884: arabinan biosynthetic process	0.00E+00
11	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
12	GO:0045184: establishment of protein localization	0.00E+00
13	GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
14	GO:0034971: histone H3-R17 methylation	0.00E+00
15	GO:0015843: methylammonium transport	0.00E+00
16	GO:0031222: arabinan catabolic process	0.00E+00
17	GO:0070979: protein K11-linked ubiquitination	0.00E+00
18	GO:0046620: regulation of organ growth	8.68E-09
19	GO:0009734: auxin-activated signaling pathway	8.90E-08
20	GO:0009926: auxin polar transport	1.40E-06
21	GO:0042793: transcription from plastid promoter	1.04E-05
22	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.33E-05
23	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	1.47E-05
24	GO:0009733: response to auxin	2.52E-05
25	GO:0007389: pattern specification process	5.61E-05
26	GO:2000038: regulation of stomatal complex development	1.77E-04
27	GO:0010252: auxin homeostasis	2.42E-04
28	GO:0032876: negative regulation of DNA endoreduplication	2.69E-04
29	GO:0000160: phosphorelay signal transduction system	5.39E-04
30	GO:0016998: cell wall macromolecule catabolic process	5.49E-04
31	GO:0042659: regulation of cell fate specification	5.80E-04
32	GO:0070509: calcium ion import	5.80E-04
33	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	5.80E-04
34	GO:0090558: plant epidermis development	5.80E-04
35	GO:0010480: microsporocyte differentiation	5.80E-04
36	GO:1903866: palisade mesophyll development	5.80E-04
37	GO:0033206: meiotic cytokinesis	5.80E-04
38	GO:0035987: endodermal cell differentiation	5.80E-04
39	GO:0043609: regulation of carbon utilization	5.80E-04
40	GO:0006436: tryptophanyl-tRNA aminoacylation	5.80E-04
41	GO:0034757: negative regulation of iron ion transport	5.80E-04
42	GO:0006955: immune response	6.42E-04
43	GO:0006468: protein phosphorylation	6.49E-04
44	GO:0009658: chloroplast organization	8.97E-04
45	GO:0000373: Group II intron splicing	1.16E-03
46	GO:0010254: nectary development	1.25E-03
47	GO:1902884: positive regulation of response to oxidative stress	1.25E-03
48	GO:0010271: regulation of chlorophyll catabolic process	1.25E-03
49	GO:0010434: bract formation	1.25E-03
50	GO:0018026: peptidyl-lysine monomethylation	1.25E-03
51	GO:0071497: cellular response to freezing	1.25E-03
52	GO:0009662: etioplast organization	1.25E-03
53	GO:1900033: negative regulation of trichome patterning	1.25E-03
54	GO:0048439: flower morphogenesis	1.25E-03
55	GO:0080009: mRNA methylation	1.25E-03
56	GO:2000123: positive regulation of stomatal complex development	1.25E-03
57	GO:0009451: RNA modification	1.66E-03
58	GO:0009736: cytokinin-activated signaling pathway	1.67E-03
59	GO:0090708: specification of plant organ axis polarity	2.05E-03
60	GO:0080117: secondary growth	2.05E-03
61	GO:0006000: fructose metabolic process	2.05E-03
62	GO:0090391: granum assembly	2.05E-03
63	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.05E-03
64	GO:0042780: tRNA 3'-end processing	2.05E-03
65	GO:0071705: nitrogen compound transport	2.05E-03
66	GO:0001578: microtubule bundle formation	2.05E-03
67	GO:0009954: proximal/distal pattern formation	2.05E-03
68	GO:0009432: SOS response	2.05E-03
69	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	2.05E-03
70	GO:0010582: floral meristem determinacy	2.12E-03
71	GO:0009767: photosynthetic electron transport chain	2.41E-03
72	GO:0051639: actin filament network formation	2.98E-03
73	GO:0010239: chloroplast mRNA processing	2.98E-03
74	GO:0009800: cinnamic acid biosynthetic process	2.98E-03
75	GO:0044211: CTP salvage	2.98E-03
76	GO:0019048: modulation by virus of host morphology or physiology	2.98E-03
77	GO:0015696: ammonium transport	2.98E-03
78	GO:0046739: transport of virus in multicellular host	2.98E-03
79	GO:2000904: regulation of starch metabolic process	2.98E-03
80	GO:0031048: chromatin silencing by small RNA	2.98E-03
81	GO:0043572: plastid fission	2.98E-03
82	GO:0000730: DNA recombinase assembly	2.98E-03
83	GO:1902476: chloride transmembrane transport	2.98E-03
84	GO:0051513: regulation of monopolar cell growth	2.98E-03
85	GO:0007231: osmosensory signaling pathway	2.98E-03
86	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.98E-03
87	GO:0070588: calcium ion transmembrane transport	3.06E-03
88	GO:0009944: polarity specification of adaxial/abaxial axis	3.79E-03
89	GO:0005992: trehalose biosynthetic process	3.79E-03
90	GO:0051764: actin crosslink formation	4.02E-03
91	GO:0051322: anaphase	4.02E-03
92	GO:0071249: cellular response to nitrate	4.02E-03
93	GO:0030104: water homeostasis	4.02E-03
94	GO:0072488: ammonium transmembrane transport	4.02E-03
95	GO:0033500: carbohydrate homeostasis	4.02E-03
96	GO:0051567: histone H3-K9 methylation	4.02E-03
97	GO:0044206: UMP salvage	4.02E-03
98	GO:1901141: regulation of lignin biosynthetic process	4.02E-03
99	GO:0006479: protein methylation	4.02E-03
100	GO:0048629: trichome patterning	4.02E-03
101	GO:0080167: response to karrikin	5.05E-03
102	GO:0010158: abaxial cell fate specification	5.16E-03
103	GO:0030308: negative regulation of cell growth	5.16E-03
104	GO:0010375: stomatal complex patterning	5.16E-03
105	GO:0016131: brassinosteroid metabolic process	5.16E-03
106	GO:0006544: glycine metabolic process	5.16E-03
107	GO:0048497: maintenance of floral organ identity	5.16E-03
108	GO:1902183: regulation of shoot apical meristem development	5.16E-03
109	GO:0016123: xanthophyll biosynthetic process	5.16E-03
110	GO:0010082: regulation of root meristem growth	5.51E-03
111	GO:0040008: regulation of growth	6.18E-03
112	GO:0009913: epidermal cell differentiation	6.40E-03
113	GO:0006655: phosphatidylglycerol biosynthetic process	6.40E-03
114	GO:0048831: regulation of shoot system development	6.40E-03
115	GO:0042176: regulation of protein catabolic process	6.40E-03
116	GO:0010315: auxin efflux	6.40E-03
117	GO:0006559: L-phenylalanine catabolic process	6.40E-03
118	GO:0006206: pyrimidine nucleobase metabolic process	6.40E-03
119	GO:0016458: gene silencing	6.40E-03
120	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.40E-03
121	GO:0009228: thiamine biosynthetic process	6.40E-03
122	GO:0006563: L-serine metabolic process	6.40E-03
123	GO:0010405: arabinogalactan protein metabolic process	6.40E-03
124	GO:0007623: circadian rhythm	6.64E-03
125	GO:0010087: phloem or xylem histogenesis	7.03E-03
126	GO:0006351: transcription, DNA-templated	7.04E-03
127	GO:0071470: cellular response to osmotic stress	7.73E-03
128	GO:0009942: longitudinal axis specification	7.73E-03
129	GO:0048509: regulation of meristem development	7.73E-03
130	GO:0030488: tRNA methylation	7.73E-03
131	GO:2000033: regulation of seed dormancy process	7.73E-03
132	GO:2000037: regulation of stomatal complex patterning	7.73E-03
133	GO:2000067: regulation of root morphogenesis	7.73E-03
134	GO:0048544: recognition of pollen	8.17E-03
135	GO:0042148: strand invasion	9.15E-03
136	GO:0006821: chloride transport	9.15E-03
137	GO:0010050: vegetative phase change	9.15E-03
138	GO:0048437: floral organ development	9.15E-03
139	GO:0010444: guard mother cell differentiation	9.15E-03
140	GO:0010103: stomatal complex morphogenesis	9.15E-03
141	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	9.15E-03
142	GO:0009610: response to symbiotic fungus	9.15E-03
143	GO:0048528: post-embryonic root development	9.15E-03
144	GO:0009416: response to light stimulus	9.24E-03
145	GO:0009909: regulation of flower development	9.53E-03
146	GO:0010583: response to cyclopentenone	1.00E-02
147	GO:0032502: developmental process	1.00E-02
148	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	1.07E-02
149	GO:0001522: pseudouridine synthesis	1.07E-02
150	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.07E-02
151	GO:0009850: auxin metabolic process	1.07E-02
152	GO:0009704: de-etiolation	1.07E-02
153	GO:0030162: regulation of proteolysis	1.07E-02
154	GO:0032875: regulation of DNA endoreduplication	1.07E-02
155	GO:0042255: ribosome assembly	1.07E-02
156	GO:0048766: root hair initiation	1.07E-02
157	GO:0055075: potassium ion homeostasis	1.07E-02
158	GO:0006002: fructose 6-phosphate metabolic process	1.23E-02
159	GO:0009827: plant-type cell wall modification	1.23E-02
160	GO:0010212: response to ionizing radiation	1.23E-02
161	GO:0010497: plasmodesmata-mediated intercellular transport	1.23E-02
162	GO:0009657: plastid organization	1.23E-02
163	GO:0051607: defense response to virus	1.29E-02
164	GO:0010027: thylakoid membrane organization	1.37E-02
165	GO:0009051: pentose-phosphate shunt, oxidative branch	1.39E-02
166	GO:2000024: regulation of leaf development	1.39E-02
167	GO:0000902: cell morphogenesis	1.39E-02
168	GO:0006355: regulation of transcription, DNA-templated	1.41E-02
169	GO:0010029: regulation of seed germination	1.45E-02
170	GO:0006974: cellular response to DNA damage stimulus	1.53E-02
171	GO:0009638: phototropism	1.57E-02
172	GO:0035999: tetrahydrofolate interconversion	1.57E-02
173	GO:0042761: very long-chain fatty acid biosynthetic process	1.57E-02
174	GO:2000280: regulation of root development	1.57E-02
175	GO:0006349: regulation of gene expression by genetic imprinting	1.57E-02
176	GO:0031425: chloroplast RNA processing	1.57E-02
177	GO:0010411: xyloglucan metabolic process	1.61E-02
178	GO:0009723: response to ethylene	1.61E-02
179	GO:0030422: production of siRNA involved in RNA interference	1.75E-02
180	GO:0009641: shade avoidance	1.75E-02
181	GO:0010048: vernalization response	1.75E-02
182	GO:0048481: plant ovule development	1.79E-02
183	GO:0006816: calcium ion transport	1.94E-02
184	GO:0009773: photosynthetic electron transport in photosystem I	1.94E-02
185	GO:0048229: gametophyte development	1.94E-02
186	GO:0010015: root morphogenesis	1.94E-02
187	GO:0006312: mitotic recombination	2.14E-02
188	GO:0015706: nitrate transport	2.14E-02
189	GO:0016024: CDP-diacylglycerol biosynthetic process	2.14E-02
190	GO:0008361: regulation of cell size	2.14E-02
191	GO:0010628: positive regulation of gene expression	2.34E-02
192	GO:0009785: blue light signaling pathway	2.34E-02
193	GO:0006006: glucose metabolic process	2.34E-02
194	GO:0009691: cytokinin biosynthetic process	2.34E-02
195	GO:0050826: response to freezing	2.34E-02
196	GO:0010075: regulation of meristem growth	2.34E-02
197	GO:0007275: multicellular organism development	2.50E-02
198	GO:0010143: cutin biosynthetic process	2.56E-02
199	GO:0010207: photosystem II assembly	2.56E-02
200	GO:0010020: chloroplast fission	2.56E-02
201	GO:0009934: regulation of meristem structural organization	2.56E-02
202	GO:0010167: response to nitrate	2.77E-02
203	GO:0006071: glycerol metabolic process	3.00E-02
204	GO:0006833: water transport	3.00E-02
205	GO:0042546: cell wall biogenesis	3.05E-02
206	GO:0007166: cell surface receptor signaling pathway	3.11E-02
207	GO:0080147: root hair cell development	3.23E-02
208	GO:0000027: ribosomal large subunit assembly	3.23E-02
209	GO:0009863: salicylic acid mediated signaling pathway	3.23E-02
210	GO:0051017: actin filament bundle assembly	3.23E-02
211	GO:0010187: negative regulation of seed germination	3.23E-02
212	GO:2000377: regulation of reactive oxygen species metabolic process	3.23E-02
213	GO:0008380: RNA splicing	3.28E-02
214	GO:0048364: root development	3.38E-02
215	GO:0006418: tRNA aminoacylation for protein translation	3.46E-02
216	GO:0006825: copper ion transport	3.46E-02
217	GO:0051302: regulation of cell division	3.46E-02
218	GO:0071555: cell wall organization	3.53E-02
219	GO:0006306: DNA methylation	3.70E-02
220	GO:0031348: negative regulation of defense response	3.95E-02
221	GO:0016310: phosphorylation	4.04E-02
222	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.20E-02
223	GO:0071215: cellular response to abscisic acid stimulus	4.20E-02
224	GO:0010227: floral organ abscission	4.20E-02
225	GO:0006417: regulation of translation	4.36E-02
226	GO:0006284: base-excision repair	4.46E-02
227	GO:0070417: cellular response to cold	4.72E-02
228	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.77E-02
229	GO:0048653: anther development	4.98E-02
230	GO:0042631: cellular response to water deprivation	4.98E-02
231	GO:0000226: microtubule cytoskeleton organization	4.98E-02
232	GO:0008033: tRNA processing	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0042834: peptidoglycan binding	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0004056: argininosuccinate lyase activity	0.00E+00
5	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	1.47E-05
6	GO:0035241: protein-arginine omega-N monomethyltransferase activity	1.47E-05
7	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	1.47E-05
8	GO:0008469: histone-arginine N-methyltransferase activity	4.88E-05
9	GO:0009672: auxin:proton symporter activity	9.88E-05
10	GO:0010329: auxin efflux transmembrane transporter activity	2.30E-04
11	GO:0016274: protein-arginine N-methyltransferase activity	5.80E-04
12	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	5.80E-04
13	GO:0004008: copper-exporting ATPase activity	5.80E-04
14	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	5.80E-04
15	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	5.80E-04
16	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.80E-04
17	GO:0052381: tRNA dimethylallyltransferase activity	5.80E-04
18	GO:0004830: tryptophan-tRNA ligase activity	5.80E-04
19	GO:0004016: adenylate cyclase activity	5.80E-04
20	GO:0003727: single-stranded RNA binding	7.69E-04
21	GO:0016301: kinase activity	1.12E-03
22	GO:0004674: protein serine/threonine kinase activity	1.18E-03
23	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.25E-03
24	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.25E-03
25	GO:0009884: cytokinin receptor activity	1.25E-03
26	GO:0000156: phosphorelay response regulator activity	1.59E-03
27	GO:0004805: trehalose-phosphatase activity	1.60E-03
28	GO:0004672: protein kinase activity	2.01E-03
29	GO:0070330: aromatase activity	2.05E-03
30	GO:0052722: fatty acid in-chain hydroxylase activity	2.05E-03
31	GO:0017150: tRNA dihydrouridine synthase activity	2.05E-03
32	GO:0045548: phenylalanine ammonia-lyase activity	2.05E-03
33	GO:0042781: 3'-tRNA processing endoribonuclease activity	2.05E-03
34	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	2.05E-03
35	GO:0005034: osmosensor activity	2.05E-03
36	GO:0005262: calcium channel activity	2.41E-03
37	GO:0035197: siRNA binding	2.98E-03
38	GO:0001872: (1->3)-beta-D-glucan binding	2.98E-03
39	GO:0004519: endonuclease activity	3.53E-03
40	GO:0005253: anion channel activity	4.02E-03
41	GO:0046556: alpha-L-arabinofuranosidase activity	4.02E-03
42	GO:0016279: protein-lysine N-methyltransferase activity	4.02E-03
43	GO:0004845: uracil phosphoribosyltransferase activity	4.02E-03
44	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.02E-03
45	GO:0004372: glycine hydroxymethyltransferase activity	5.16E-03
46	GO:0016773: phosphotransferase activity, alcohol group as acceptor	5.16E-03
47	GO:0018685: alkane 1-monooxygenase activity	5.16E-03
48	GO:0008725: DNA-3-methyladenine glycosylase activity	5.16E-03
49	GO:0008519: ammonium transmembrane transporter activity	6.40E-03
50	GO:0005247: voltage-gated chloride channel activity	6.40E-03
51	GO:2001070: starch binding	6.40E-03
52	GO:0004605: phosphatidate cytidylyltransferase activity	6.40E-03
53	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.40E-03
54	GO:0008195: phosphatidate phosphatase activity	7.73E-03
55	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	7.73E-03
56	GO:0004849: uridine kinase activity	7.73E-03
57	GO:0019900: kinase binding	7.73E-03
58	GO:0019901: protein kinase binding	8.77E-03
59	GO:0000150: recombinase activity	9.15E-03
60	GO:0016762: xyloglucan:xyloglucosyl transferase activity	9.39E-03
61	GO:0000400: four-way junction DNA binding	1.07E-02
62	GO:0004520: endodeoxyribonuclease activity	1.07E-02
63	GO:0008168: methyltransferase activity	1.22E-02
64	GO:0005375: copper ion transmembrane transporter activity	1.23E-02
65	GO:0000989: transcription factor activity, transcription factor binding	1.39E-02
66	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.39E-02
67	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.61E-02
68	GO:0004673: protein histidine kinase activity	1.75E-02
69	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.94E-02
70	GO:0008559: xenobiotic-transporting ATPase activity	1.94E-02
71	GO:0004521: endoribonuclease activity	2.14E-02
72	GO:0003697: single-stranded DNA binding	2.27E-02
73	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.33E-02
74	GO:0004022: alcohol dehydrogenase (NAD) activity	2.34E-02
75	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.34E-02
76	GO:0031072: heat shock protein binding	2.34E-02
77	GO:0000155: phosphorelay sensor kinase activity	2.34E-02
78	GO:0009982: pseudouridine synthase activity	2.34E-02
79	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.41E-02
80	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.48E-02
81	GO:0004871: signal transducer activity	2.50E-02
82	GO:0042803: protein homodimerization activity	2.50E-02
83	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.56E-02
84	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.74E-02
85	GO:0005524: ATP binding	3.14E-02
86	GO:0043424: protein histidine kinase binding	3.46E-02
87	GO:0005345: purine nucleobase transmembrane transporter activity	3.46E-02
88	GO:0008094: DNA-dependent ATPase activity	3.70E-02
89	GO:0033612: receptor serine/threonine kinase binding	3.70E-02
90	GO:0008408: 3'-5' exonuclease activity	3.70E-02
91	GO:0003690: double-stranded DNA binding	4.08E-02
92	GO:0005215: transporter activity	4.23E-02
93	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.23E-02
94	GO:0003723: RNA binding	4.34E-02
95	GO:0003777: microtubule motor activity	4.36E-02
96	GO:0030246: carbohydrate binding	4.36E-02
97	GO:0008514: organic anion transmembrane transporter activity	4.46E-02
98	GO:0016788: hydrolase activity, acting on ester bonds	4.61E-02
99	GO:0018024: histone-lysine N-methyltransferase activity	4.72E-02
100	GO:0004812: aminoacyl-tRNA ligase activity	4.72E-02