Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G62540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009312: oligosaccharide biosynthetic process0.00E+00
2GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
3GO:0090567: reproductive shoot system development5.79E-05
4GO:1900424: regulation of defense response to bacterium5.79E-05
5GO:0043066: negative regulation of apoptotic process1.41E-04
6GO:0007584: response to nutrient1.41E-04
7GO:0061158: 3'-UTR-mediated mRNA destabilization2.40E-04
8GO:0010498: proteasomal protein catabolic process2.40E-04
9GO:0010306: rhamnogalacturonan II biosynthetic process3.49E-04
10GO:0010107: potassium ion import4.66E-04
11GO:0018344: protein geranylgeranylation5.92E-04
12GO:0009247: glycolipid biosynthetic process5.92E-04
13GO:0045995: regulation of embryonic development1.01E-03
14GO:0051707: response to other organism1.14E-03
15GO:0030091: protein repair1.16E-03
16GO:0019375: galactolipid biosynthetic process1.16E-03
17GO:1900150: regulation of defense response to fungus1.16E-03
18GO:0009056: catabolic process1.48E-03
19GO:0019432: triglyceride biosynthetic process1.48E-03
20GO:0006486: protein glycosylation1.52E-03
21GO:0010629: negative regulation of gene expression1.83E-03
22GO:0046856: phosphatidylinositol dephosphorylation2.02E-03
23GO:0010628: positive regulation of gene expression2.41E-03
24GO:2000028: regulation of photoperiodism, flowering2.41E-03
25GO:0055046: microgametogenesis2.41E-03
26GO:0010102: lateral root morphogenesis2.41E-03
27GO:0007034: vacuolar transport2.62E-03
28GO:0010030: positive regulation of seed germination2.82E-03
29GO:0007030: Golgi organization2.82E-03
30GO:0006071: glycerol metabolic process3.04E-03
31GO:0006289: nucleotide-excision repair3.26E-03
32GO:0003333: amino acid transmembrane transport3.72E-03
33GO:0006334: nucleosome assembly3.72E-03
34GO:0048278: vesicle docking3.72E-03
35GO:0071456: cellular response to hypoxia3.95E-03
36GO:0009306: protein secretion4.44E-03
37GO:0009561: megagametogenesis4.44E-03
38GO:0010118: stomatal movement4.95E-03
39GO:0061025: membrane fusion5.48E-03
40GO:0042752: regulation of circadian rhythm5.48E-03
41GO:0009749: response to glucose5.75E-03
42GO:0006623: protein targeting to vacuole5.75E-03
43GO:0016032: viral process6.31E-03
44GO:0007264: small GTPase mediated signal transduction6.31E-03
45GO:1901657: glycosyl compound metabolic process6.59E-03
46GO:0010029: regulation of seed germination8.08E-03
47GO:0006906: vesicle fusion8.40E-03
48GO:0006886: intracellular protein transport8.67E-03
49GO:0007568: aging1.04E-02
50GO:0000724: double-strand break repair via homologous recombination1.07E-02
51GO:0006865: amino acid transport1.07E-02
52GO:0009867: jasmonic acid mediated signaling pathway1.11E-02
53GO:0005975: carbohydrate metabolic process1.33E-02
54GO:0000209: protein polyubiquitination1.36E-02
55GO:0006855: drug transmembrane transport1.47E-02
56GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.51E-02
57GO:0006857: oligopeptide transport1.71E-02
58GO:0035556: intracellular signal transduction1.95E-02
59GO:0009624: response to nematode2.10E-02
60GO:0018105: peptidyl-serine phosphorylation2.14E-02
61GO:0051726: regulation of cell cycle2.19E-02
62GO:0016036: cellular response to phosphate starvation2.94E-02
63GO:0010228: vegetative to reproductive phase transition of meristem3.20E-02
64GO:0006468: protein phosphorylation3.34E-02
65GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.35E-02
66GO:0042742: defense response to bacterium3.73E-02
67GO:0045944: positive regulation of transcription from RNA polymerase II promoter4.00E-02
68GO:0015031: protein transport4.73E-02
69GO:0080167: response to karrikin4.92E-02
RankGO TermAdjusted P value
1GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0005092: GDP-dissociation inhibitor activity0.00E+00
4GO:0035252: UDP-xylosyltransferase activity9.15E-06
5GO:0046481: digalactosyldiacylglycerol synthase activity5.79E-05
6GO:0048531: beta-1,3-galactosyltransferase activity1.41E-04
7GO:0005093: Rab GDP-dissociation inhibitor activity2.40E-04
8GO:0035250: UDP-galactosyltransferase activity3.49E-04
9GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly4.66E-04
10GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.92E-04
11GO:0017137: Rab GTPase binding5.92E-04
12GO:0008375: acetylglucosaminyltransferase activity6.17E-04
13GO:0003730: mRNA 3'-UTR binding8.63E-04
14GO:0004144: diacylglycerol O-acyltransferase activity8.63E-04
15GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.63E-04
16GO:0033743: peptide-methionine (R)-S-oxide reductase activity8.63E-04
17GO:0004012: phospholipid-translocating ATPase activity8.63E-04
18GO:0005267: potassium channel activity1.32E-03
19GO:0071949: FAD binding1.48E-03
20GO:0008378: galactosyltransferase activity2.21E-03
21GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.41E-03
22GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.62E-03
23GO:0004725: protein tyrosine phosphatase activity3.04E-03
24GO:0008134: transcription factor binding3.26E-03
25GO:0003713: transcription coactivator activity5.21E-03
26GO:0010181: FMN binding5.48E-03
27GO:0009931: calcium-dependent protein serine/threonine kinase activity8.40E-03
28GO:0004721: phosphoprotein phosphatase activity8.71E-03
29GO:0004683: calmodulin-dependent protein kinase activity8.71E-03
30GO:0102483: scopolin beta-glucosidase activity8.71E-03
31GO:0005096: GTPase activator activity9.69E-03
32GO:0015238: drug transmembrane transporter activity9.69E-03
33GO:0016757: transferase activity, transferring glycosyl groups9.82E-03
34GO:0016491: oxidoreductase activity1.11E-02
35GO:0008422: beta-glucosidase activity1.18E-02
36GO:0000149: SNARE binding1.18E-02
37GO:0005484: SNAP receptor activity1.32E-02
38GO:0015171: amino acid transmembrane transporter activity1.75E-02
39GO:0016787: hydrolase activity2.05E-02
40GO:0016758: transferase activity, transferring hexosyl groups2.41E-02
41GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.44E-02
42GO:0004252: serine-type endopeptidase activity2.65E-02
43GO:0015297: antiporter activity2.99E-02
44GO:0008194: UDP-glycosyltransferase activity3.35E-02
45GO:0005509: calcium ion binding3.45E-02
46GO:0016301: kinase activity3.88E-02
47GO:0005215: transporter activity4.12E-02
48GO:0000287: magnesium ion binding4.17E-02
49GO:0016788: hydrolase activity, acting on ester bonds4.28E-02
50GO:0003682: chromatin binding4.39E-02
51GO:0004497: monooxygenase activity4.92E-02
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Gene type



Gene DE type