Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59750

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
2GO:1905157: positive regulation of photosynthesis0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
6GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
7GO:0006573: valine metabolic process0.00E+00
8GO:0030974: thiamine pyrophosphate transport1.44E-04
9GO:0046467: membrane lipid biosynthetic process1.44E-04
10GO:0006551: leucine metabolic process1.44E-04
11GO:0042371: vitamin K biosynthetic process1.44E-04
12GO:0043007: maintenance of rDNA1.44E-04
13GO:0019510: S-adenosylhomocysteine catabolic process1.44E-04
14GO:1902334: fructose export from vacuole to cytoplasm1.44E-04
15GO:0015755: fructose transport1.44E-04
16GO:0051180: vitamin transport1.44E-04
17GO:0009821: alkaloid biosynthetic process1.53E-04
18GO:0032259: methylation2.42E-04
19GO:0033353: S-adenosylmethionine cycle3.29E-04
20GO:0015790: UDP-xylose transport3.29E-04
21GO:0006898: receptor-mediated endocytosis3.29E-04
22GO:0015893: drug transport3.29E-04
23GO:0010207: photosystem II assembly3.77E-04
24GO:0006696: ergosterol biosynthetic process5.40E-04
25GO:0071484: cellular response to light intensity7.73E-04
26GO:0042823: pyridoxal phosphate biosynthetic process7.73E-04
27GO:0071483: cellular response to blue light1.02E-03
28GO:0009902: chloroplast relocation1.02E-03
29GO:0015689: molybdate ion transport1.02E-03
30GO:0009904: chloroplast accumulation movement1.29E-03
31GO:0006465: signal peptide processing1.29E-03
32GO:0016042: lipid catabolic process1.37E-03
33GO:1902456: regulation of stomatal opening1.59E-03
34GO:0009643: photosynthetic acclimation1.59E-03
35GO:0009082: branched-chain amino acid biosynthetic process1.91E-03
36GO:0017148: negative regulation of translation1.91E-03
37GO:0009099: valine biosynthetic process1.91E-03
38GO:0009903: chloroplast avoidance movement1.91E-03
39GO:0009854: oxidative photosynthetic carbon pathway1.91E-03
40GO:0010019: chloroplast-nucleus signaling pathway1.91E-03
41GO:0015995: chlorophyll biosynthetic process2.09E-03
42GO:1900056: negative regulation of leaf senescence2.24E-03
43GO:0030244: cellulose biosynthetic process2.31E-03
44GO:0000105: histidine biosynthetic process2.60E-03
45GO:0009097: isoleucine biosynthetic process2.96E-03
46GO:0009932: cell tip growth2.96E-03
47GO:0009657: plastid organization2.96E-03
48GO:0010206: photosystem II repair3.35E-03
49GO:0034765: regulation of ion transmembrane transport3.35E-03
50GO:0009658: chloroplast organization3.39E-03
51GO:0048354: mucilage biosynthetic process involved in seed coat development3.76E-03
52GO:0010380: regulation of chlorophyll biosynthetic process3.76E-03
53GO:0009641: shade avoidance4.18E-03
54GO:0010192: mucilage biosynthetic process4.18E-03
55GO:0006995: cellular response to nitrogen starvation4.18E-03
56GO:0043085: positive regulation of catalytic activity4.61E-03
57GO:0009750: response to fructose4.61E-03
58GO:0006857: oligopeptide transport5.40E-03
59GO:0007015: actin filament organization6.00E-03
60GO:0010223: secondary shoot formation6.00E-03
61GO:0009833: plant-type primary cell wall biogenesis7.00E-03
62GO:0019762: glucosinolate catabolic process7.00E-03
63GO:0051017: actin filament bundle assembly7.52E-03
64GO:0019953: sexual reproduction8.06E-03
65GO:0051260: protein homooligomerization8.61E-03
66GO:0019748: secondary metabolic process9.17E-03
67GO:0006730: one-carbon metabolic process9.17E-03
68GO:0009058: biosynthetic process9.48E-03
69GO:0009294: DNA mediated transformation9.75E-03
70GO:0071555: cell wall organization9.96E-03
71GO:0009306: protein secretion1.03E-02
72GO:0019722: calcium-mediated signaling1.03E-02
73GO:0016117: carotenoid biosynthetic process1.09E-02
74GO:0070417: cellular response to cold1.09E-02
75GO:0042391: regulation of membrane potential1.16E-02
76GO:0007623: circadian rhythm1.24E-02
77GO:0007059: chromosome segregation1.28E-02
78GO:0009646: response to absence of light1.28E-02
79GO:0007264: small GTPase mediated signal transduction1.48E-02
80GO:0007267: cell-cell signaling1.69E-02
81GO:0071805: potassium ion transmembrane transport1.69E-02
82GO:0010411: xyloglucan metabolic process2.06E-02
83GO:0009813: flavonoid biosynthetic process2.30E-02
84GO:0006499: N-terminal protein myristoylation2.38E-02
85GO:0009910: negative regulation of flower development2.46E-02
86GO:0009853: photorespiration2.63E-02
87GO:0034599: cellular response to oxidative stress2.71E-02
88GO:0006839: mitochondrial transport2.88E-02
89GO:0010114: response to red light3.15E-02
90GO:0042546: cell wall biogenesis3.23E-02
91GO:0008643: carbohydrate transport3.33E-02
92GO:0009664: plant-type cell wall organization3.70E-02
93GO:0042538: hyperosmotic salinity response3.70E-02
94GO:0008152: metabolic process3.89E-02
95GO:0009585: red, far-red light phototransduction3.89E-02
96GO:0006813: potassium ion transport3.89E-02
97GO:0006417: regulation of translation4.18E-02
98GO:0048367: shoot system development4.48E-02
RankGO TermAdjusted P value
1GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
2GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
3GO:0015284: fructose uniporter activity0.00E+00
4GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
5GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
6GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
7GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
8GO:0046905: phytoene synthase activity0.00E+00
9GO:0018708: thiol S-methyltransferase activity1.02E-06
10GO:0008168: methyltransferase activity7.07E-05
11GO:0016618: hydroxypyruvate reductase activity1.44E-04
12GO:0003984: acetolactate synthase activity1.44E-04
13GO:0003879: ATP phosphoribosyltransferase activity1.44E-04
14GO:0035671: enone reductase activity1.44E-04
15GO:0046906: tetrapyrrole binding1.44E-04
16GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.44E-04
17GO:0090422: thiamine pyrophosphate transporter activity1.44E-04
18GO:0004013: adenosylhomocysteinase activity1.44E-04
19GO:0051996: squalene synthase activity1.44E-04
20GO:0010313: phytochrome binding1.44E-04
21GO:0016844: strictosidine synthase activity1.84E-04
22GO:0005353: fructose transmembrane transporter activity3.29E-04
23GO:0004310: farnesyl-diphosphate farnesyltransferase activity3.29E-04
24GO:0005464: UDP-xylose transmembrane transporter activity3.29E-04
25GO:0030267: glyoxylate reductase (NADP) activity5.40E-04
26GO:0010277: chlorophyllide a oxygenase [overall] activity5.40E-04
27GO:0022890: inorganic cation transmembrane transporter activity7.73E-04
28GO:0048027: mRNA 5'-UTR binding7.73E-04
29GO:0080032: methyl jasmonate esterase activity1.02E-03
30GO:0015098: molybdate ion transmembrane transporter activity1.02E-03
31GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.29E-03
32GO:0080030: methyl indole-3-acetate esterase activity1.59E-03
33GO:0035673: oligopeptide transmembrane transporter activity1.59E-03
34GO:0047714: galactolipase activity1.59E-03
35GO:0051753: mannan synthase activity1.91E-03
36GO:0005242: inward rectifier potassium channel activity1.91E-03
37GO:0019899: enzyme binding2.24E-03
38GO:0008970: phosphatidylcholine 1-acylhydrolase activity2.96E-03
39GO:0016788: hydrolase activity, acting on ester bonds3.47E-03
40GO:0051287: NAD binding4.54E-03
41GO:0015386: potassium:proton antiporter activity4.61E-03
42GO:0052689: carboxylic ester hydrolase activity5.05E-03
43GO:0015198: oligopeptide transporter activity5.06E-03
44GO:0016298: lipase activity5.22E-03
45GO:0031072: heat shock protein binding5.52E-03
46GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups6.16E-03
47GO:0051119: sugar transmembrane transporter activity6.50E-03
48GO:0015079: potassium ion transmembrane transporter activity8.06E-03
49GO:0016779: nucleotidyltransferase activity9.17E-03
50GO:0016760: cellulose synthase (UDP-forming) activity9.75E-03
51GO:0003727: single-stranded RNA binding1.03E-02
52GO:0005249: voltage-gated potassium channel activity1.16E-02
53GO:0030551: cyclic nucleotide binding1.16E-02
54GO:0008080: N-acetyltransferase activity1.22E-02
55GO:0015299: solute:proton antiporter activity1.28E-02
56GO:0016762: xyloglucan:xyloglucosyl transferase activity1.41E-02
57GO:0004518: nuclease activity1.48E-02
58GO:0042802: identical protein binding1.58E-02
59GO:0016759: cellulose synthase activity1.62E-02
60GO:0016722: oxidoreductase activity, oxidizing metal ions1.69E-02
61GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.69E-02
62GO:0016597: amino acid binding1.76E-02
63GO:0016798: hydrolase activity, acting on glycosyl bonds2.06E-02
64GO:0004806: triglyceride lipase activity2.06E-02
65GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.14E-02
66GO:0005507: copper ion binding2.36E-02
67GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.63E-02
68GO:0004871: signal transducer activity3.00E-02
69GO:0004185: serine-type carboxypeptidase activity3.15E-02
70GO:0051537: 2 iron, 2 sulfur cluster binding3.33E-02
71GO:0043621: protein self-association3.33E-02
72GO:0009055: electron carrier activity3.78E-02
73GO:0005215: transporter activity4.14E-02
74GO:0016874: ligase activity4.78E-02
75GO:0022857: transmembrane transporter activity4.78E-02
76GO:0051082: unfolded protein binding4.99E-02
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Gene type



Gene DE type