Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0010273: detoxification of copper ion0.00E+00
3GO:0002764: immune response-regulating signaling pathway0.00E+00
4GO:0051553: flavone biosynthetic process0.00E+00
5GO:0010398: xylogalacturonan metabolic process0.00E+00
6GO:0006497: protein lipidation0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0016559: peroxisome fission9.98E-06
9GO:0009164: nucleoside catabolic process1.08E-04
10GO:0050832: defense response to fungus1.50E-04
11GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.29E-04
12GO:0033306: phytol metabolic process3.29E-04
13GO:1901430: positive regulation of syringal lignin biosynthetic process3.29E-04
14GO:0010045: response to nickel cation3.29E-04
15GO:0032491: detection of molecule of fungal origin3.29E-04
16GO:0060862: negative regulation of floral organ abscission3.29E-04
17GO:1902600: hydrogen ion transmembrane transport3.29E-04
18GO:0010150: leaf senescence3.49E-04
19GO:0010204: defense response signaling pathway, resistance gene-independent4.26E-04
20GO:1900426: positive regulation of defense response to bacterium6.05E-04
21GO:0006032: chitin catabolic process7.06E-04
22GO:0019374: galactolipid metabolic process7.18E-04
23GO:0002240: response to molecule of oomycetes origin7.18E-04
24GO:0031349: positive regulation of defense response7.18E-04
25GO:1901703: protein localization involved in auxin polar transport7.18E-04
26GO:0010115: regulation of abscisic acid biosynthetic process7.18E-04
27GO:0010042: response to manganese ion7.18E-04
28GO:0060919: auxin influx7.18E-04
29GO:0010271: regulation of chlorophyll catabolic process7.18E-04
30GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.18E-04
31GO:0010541: acropetal auxin transport7.18E-04
32GO:0042814: monopolar cell growth7.18E-04
33GO:0010155: regulation of proton transport7.18E-04
34GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.18E-04
35GO:0000266: mitochondrial fission9.28E-04
36GO:0002230: positive regulation of defense response to virus by host1.16E-03
37GO:0080163: regulation of protein serine/threonine phosphatase activity1.16E-03
38GO:0016045: detection of bacterium1.16E-03
39GO:0010359: regulation of anion channel activity1.16E-03
40GO:0051176: positive regulation of sulfur metabolic process1.16E-03
41GO:0044375: regulation of peroxisome size1.16E-03
42GO:0090630: activation of GTPase activity1.16E-03
43GO:0072661: protein targeting to plasma membrane1.16E-03
44GO:0010272: response to silver ion1.16E-03
45GO:0002237: response to molecule of bacterial origin1.18E-03
46GO:0010540: basipetal auxin transport1.18E-03
47GO:0006952: defense response1.20E-03
48GO:0030100: regulation of endocytosis1.67E-03
49GO:1902290: positive regulation of defense response to oomycetes1.67E-03
50GO:0046513: ceramide biosynthetic process1.67E-03
51GO:0002239: response to oomycetes1.67E-03
52GO:0051707: response to other organism1.92E-03
53GO:0016998: cell wall macromolecule catabolic process1.97E-03
54GO:0006979: response to oxidative stress2.21E-03
55GO:0009636: response to toxic substance2.23E-03
56GO:0045088: regulation of innate immune response2.24E-03
57GO:0033358: UDP-L-arabinose biosynthetic process2.24E-03
58GO:0000919: cell plate assembly2.24E-03
59GO:0006878: cellular copper ion homeostasis2.24E-03
60GO:0034613: cellular protein localization2.24E-03
61GO:0010222: stem vascular tissue pattern formation2.24E-03
62GO:0045227: capsule polysaccharide biosynthetic process2.24E-03
63GO:0009809: lignin biosynthetic process2.81E-03
64GO:0016094: polyprenol biosynthetic process2.87E-03
65GO:0006465: signal peptide processing2.87E-03
66GO:0030308: negative regulation of cell growth2.87E-03
67GO:0000304: response to singlet oxygen2.87E-03
68GO:0097428: protein maturation by iron-sulfur cluster transfer2.87E-03
69GO:0009229: thiamine diphosphate biosynthetic process2.87E-03
70GO:0018344: protein geranylgeranylation2.87E-03
71GO:0042391: regulation of membrane potential3.00E-03
72GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.54E-03
73GO:0010315: auxin efflux3.54E-03
74GO:0060918: auxin transport3.54E-03
75GO:0009228: thiamine biosynthetic process3.54E-03
76GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.54E-03
77GO:0010337: regulation of salicylic acid metabolic process3.54E-03
78GO:0002238: response to molecule of fungal origin3.54E-03
79GO:0010942: positive regulation of cell death3.54E-03
80GO:0007165: signal transduction3.88E-03
81GO:0009620: response to fungus3.92E-03
82GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.26E-03
83GO:0009630: gravitropism4.26E-03
84GO:0080036: regulation of cytokinin-activated signaling pathway4.26E-03
85GO:0006914: autophagy4.83E-03
86GO:1900057: positive regulation of leaf senescence5.03E-03
87GO:0010038: response to metal ion5.03E-03
88GO:1900150: regulation of defense response to fungus5.85E-03
89GO:0006644: phospholipid metabolic process5.85E-03
90GO:0009788: negative regulation of abscisic acid-activated signaling pathway6.09E-03
91GO:0010497: plasmodesmata-mediated intercellular transport6.71E-03
92GO:0019432: triglyceride biosynthetic process7.60E-03
93GO:0090333: regulation of stomatal closure7.60E-03
94GO:0007338: single fertilization7.60E-03
95GO:0009407: toxin catabolic process8.30E-03
96GO:0016042: lipid catabolic process8.41E-03
97GO:0048268: clathrin coat assembly8.55E-03
98GO:0048354: mucilage biosynthetic process involved in seed coat development8.55E-03
99GO:0010380: regulation of chlorophyll biosynthetic process8.55E-03
100GO:2000280: regulation of root development8.55E-03
101GO:0008202: steroid metabolic process8.55E-03
102GO:0007568: aging8.71E-03
103GO:0006629: lipid metabolic process8.78E-03
104GO:0010215: cellulose microfibril organization9.53E-03
105GO:0000272: polysaccharide catabolic process1.06E-02
106GO:0030148: sphingolipid biosynthetic process1.06E-02
107GO:0006887: exocytosis1.14E-02
108GO:0006897: endocytosis1.14E-02
109GO:0045037: protein import into chloroplast stroma1.16E-02
110GO:0071365: cellular response to auxin stimulus1.16E-02
111GO:0010102: lateral root morphogenesis1.27E-02
112GO:0034605: cellular response to heat1.38E-02
113GO:0046688: response to copper ion1.50E-02
114GO:0070588: calcium ion transmembrane transport1.50E-02
115GO:0009225: nucleotide-sugar metabolic process1.50E-02
116GO:0007031: peroxisome organization1.50E-02
117GO:0034976: response to endoplasmic reticulum stress1.62E-02
118GO:0006486: protein glycosylation1.67E-02
119GO:0006813: potassium ion transport1.67E-02
120GO:0009863: salicylic acid mediated signaling pathway1.75E-02
121GO:0005992: trehalose biosynthetic process1.75E-02
122GO:0010073: meristem maintenance1.87E-02
123GO:0006825: copper ion transport1.87E-02
124GO:0042742: defense response to bacterium2.05E-02
125GO:0016226: iron-sulfur cluster assembly2.14E-02
126GO:0007005: mitochondrion organization2.14E-02
127GO:0071456: cellular response to hypoxia2.14E-02
128GO:0030245: cellulose catabolic process2.14E-02
129GO:0010227: floral organ abscission2.27E-02
130GO:0006012: galactose metabolic process2.27E-02
131GO:0010089: xylem development2.41E-02
132GO:0010584: pollen exine formation2.41E-02
133GO:0070417: cellular response to cold2.55E-02
134GO:0000413: protein peptidyl-prolyl isomerization2.70E-02
135GO:0045489: pectin biosynthetic process2.85E-02
136GO:0071472: cellular response to salt stress2.85E-02
137GO:0006885: regulation of pH2.85E-02
138GO:0032259: methylation3.12E-02
139GO:0009058: biosynthetic process3.14E-02
140GO:0002229: defense response to oomycetes3.31E-02
141GO:0042744: hydrogen peroxide catabolic process3.39E-02
142GO:0032502: developmental process3.47E-02
143GO:0030163: protein catabolic process3.63E-02
144GO:0006464: cellular protein modification process3.79E-02
145GO:0009567: double fertilization forming a zygote and endosperm3.79E-02
146GO:0071805: potassium ion transmembrane transport3.96E-02
147GO:0006904: vesicle docking involved in exocytosis3.96E-02
148GO:0051607: defense response to virus4.13E-02
149GO:0001666: response to hypoxia4.30E-02
150GO:0009615: response to virus4.30E-02
151GO:0006906: vesicle fusion4.65E-02
152GO:0006974: cellular response to DNA damage stimulus4.65E-02
153GO:0009627: systemic acquired resistance4.65E-02
154GO:0006470: protein dephosphorylation4.68E-02
155GO:0009617: response to bacterium4.88E-02
RankGO TermAdjusted P value
1GO:0005212: structural constituent of eye lens0.00E+00
2GO:0050334: thiaminase activity0.00E+00
3GO:1990482: sphingolipid alpha-glucuronosyltransferase activity0.00E+00
4GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0033759: flavone synthase activity0.00E+00
7GO:0019779: Atg8 activating enzyme activity4.91E-06
8GO:0005496: steroid binding1.08E-04
9GO:0019786: Atg8-specific protease activity3.29E-04
10GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.29E-04
11GO:0004649: poly(ADP-ribose) glycohydrolase activity3.29E-04
12GO:0015927: trehalase activity3.29E-04
13GO:0004662: CAAX-protein geranylgeranyltransferase activity3.29E-04
14GO:0004714: transmembrane receptor protein tyrosine kinase activity3.48E-04
15GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.26E-04
16GO:0004568: chitinase activity7.06E-04
17GO:0008171: O-methyltransferase activity7.06E-04
18GO:0015020: glucuronosyltransferase activity7.06E-04
19GO:0022821: potassium ion antiporter activity7.18E-04
20GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity7.18E-04
21GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity7.18E-04
22GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity7.18E-04
23GO:0032934: sterol binding7.18E-04
24GO:1990585: hydroxyproline O-arabinosyltransferase activity7.18E-04
25GO:0050736: O-malonyltransferase activity7.18E-04
26GO:0045140: inositol phosphoceramide synthase activity7.18E-04
27GO:0052739: phosphatidylserine 1-acylhydrolase activity7.18E-04
28GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity7.18E-04
29GO:0004806: triglyceride lipase activity9.11E-04
30GO:0005388: calcium-transporting ATPase activity1.05E-03
31GO:0042409: caffeoyl-CoA O-methyltransferase activity1.16E-03
32GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.16E-03
33GO:0016595: glutamate binding1.16E-03
34GO:0000030: mannosyltransferase activity1.16E-03
35GO:0030552: cAMP binding1.32E-03
36GO:0030553: cGMP binding1.32E-03
37GO:0004416: hydroxyacylglutathione hydrolase activity1.67E-03
38GO:0035529: NADH pyrophosphatase activity1.67E-03
39GO:0022890: inorganic cation transmembrane transporter activity1.67E-03
40GO:0005216: ion channel activity1.80E-03
41GO:0010328: auxin influx transmembrane transporter activity2.24E-03
42GO:0019199: transmembrane receptor protein kinase activity2.24E-03
43GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.24E-03
44GO:0019776: Atg8 ligase activity2.24E-03
45GO:0050373: UDP-arabinose 4-epimerase activity2.24E-03
46GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.24E-03
47GO:0002094: polyprenyltransferase activity2.87E-03
48GO:0047631: ADP-ribose diphosphatase activity2.87E-03
49GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.87E-03
50GO:0008374: O-acyltransferase activity2.87E-03
51GO:0030551: cyclic nucleotide binding3.00E-03
52GO:0005249: voltage-gated potassium channel activity3.00E-03
53GO:0015299: solute:proton antiporter activity3.47E-03
54GO:0004601: peroxidase activity3.50E-03
55GO:0047714: galactolipase activity3.54E-03
56GO:0000210: NAD+ diphosphatase activity3.54E-03
57GO:0035252: UDP-xylosyltransferase activity3.54E-03
58GO:0016787: hydrolase activity4.15E-03
59GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides4.26E-03
60GO:0009927: histidine phosphotransfer kinase activity4.26E-03
61GO:0003978: UDP-glucose 4-epimerase activity4.26E-03
62GO:0004602: glutathione peroxidase activity4.26E-03
63GO:0004144: diacylglycerol O-acyltransferase activity4.26E-03
64GO:0051920: peroxiredoxin activity4.26E-03
65GO:0016791: phosphatase activity4.83E-03
66GO:0004620: phospholipase activity5.03E-03
67GO:0016758: transferase activity, transferring hexosyl groups5.67E-03
68GO:0016209: antioxidant activity5.85E-03
69GO:0008142: oxysterol binding6.71E-03
70GO:0004721: phosphoprotein phosphatase activity6.79E-03
71GO:0071949: FAD binding7.60E-03
72GO:0047617: acyl-CoA hydrolase activity8.55E-03
73GO:0030145: manganese ion binding8.71E-03
74GO:0004864: protein phosphatase inhibitor activity9.53E-03
75GO:0004713: protein tyrosine kinase activity9.53E-03
76GO:0004805: trehalose-phosphatase activity9.53E-03
77GO:0005545: 1-phosphatidylinositol binding9.53E-03
78GO:0008047: enzyme activator activity9.53E-03
79GO:0015386: potassium:proton antiporter activity1.06E-02
80GO:0008559: xenobiotic-transporting ATPase activity1.06E-02
81GO:0004364: glutathione transferase activity1.19E-02
82GO:0010329: auxin efflux transmembrane transporter activity1.27E-02
83GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.27E-02
84GO:0008061: chitin binding1.50E-02
85GO:0004190: aspartic-type endopeptidase activity1.50E-02
86GO:0004725: protein tyrosine phosphatase activity1.62E-02
87GO:0051536: iron-sulfur cluster binding1.75E-02
88GO:0043424: protein histidine kinase binding1.87E-02
89GO:0015079: potassium ion transmembrane transporter activity1.87E-02
90GO:0035251: UDP-glucosyltransferase activity2.00E-02
91GO:0080043: quercetin 3-O-glucosyltransferase activity2.17E-02
92GO:0080044: quercetin 7-O-glucosyltransferase activity2.17E-02
93GO:0008810: cellulase activity2.27E-02
94GO:0003756: protein disulfide isomerase activity2.41E-02
95GO:0005451: monovalent cation:proton antiporter activity2.70E-02
96GO:0030276: clathrin binding2.85E-02
97GO:0004722: protein serine/threonine phosphatase activity2.85E-02
98GO:0010181: FMN binding3.00E-02
99GO:0046872: metal ion binding3.01E-02
100GO:0016301: kinase activity3.25E-02
101GO:0015385: sodium:proton antiporter activity3.63E-02
102GO:0016722: oxidoreductase activity, oxidizing metal ions3.96E-02
103GO:0008194: UDP-glycosyltransferase activity4.58E-02
104GO:0005515: protein binding4.78E-02
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Gene type



Gene DE type