Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G59490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010273: detoxification of copper ion0.00E+00
2GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
3GO:0002764: immune response-regulating signaling pathway0.00E+00
4GO:1902009: positive regulation of toxin transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0031349: positive regulation of defense response3.96E-06
7GO:0006979: response to oxidative stress2.27E-05
8GO:0015031: protein transport5.47E-05
9GO:0009636: response to toxic substance2.62E-04
10GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.94E-04
11GO:0009609: response to symbiotic bacterium2.94E-04
12GO:0006643: membrane lipid metabolic process2.94E-04
13GO:0010045: response to nickel cation2.94E-04
14GO:1901430: positive regulation of syringal lignin biosynthetic process2.94E-04
15GO:0060862: negative regulation of floral organ abscission2.94E-04
16GO:1902600: hydrogen ion transmembrane transport2.94E-04
17GO:0048508: embryonic meristem development2.94E-04
18GO:0009617: response to bacterium3.56E-04
19GO:0006032: chitin catabolic process6.02E-04
20GO:0019374: galactolipid metabolic process6.45E-04
21GO:0009945: radial axis specification6.45E-04
22GO:0000719: photoreactive repair6.45E-04
23GO:0010042: response to manganese ion6.45E-04
24GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.45E-04
25GO:0045905: positive regulation of translational termination6.45E-04
26GO:0019441: tryptophan catabolic process to kynurenine6.45E-04
27GO:0015914: phospholipid transport6.45E-04
28GO:0045901: positive regulation of translational elongation6.45E-04
29GO:0010155: regulation of proton transport6.45E-04
30GO:0009838: abscission6.45E-04
31GO:0006452: translational frameshifting6.45E-04
32GO:0016192: vesicle-mediated transport9.13E-04
33GO:0009407: toxin catabolic process9.53E-04
34GO:0007568: aging1.01E-03
35GO:0002230: positive regulation of defense response to virus by host1.04E-03
36GO:0080163: regulation of protein serine/threonine phosphatase activity1.04E-03
37GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.04E-03
38GO:0016045: detection of bacterium1.04E-03
39GO:0010359: regulation of anion channel activity1.04E-03
40GO:0044375: regulation of peroxisome size1.04E-03
41GO:0046688: response to copper ion1.13E-03
42GO:0006886: intracellular protein transport1.21E-03
43GO:0043207: response to external biotic stimulus1.50E-03
44GO:0030100: regulation of endocytosis1.50E-03
45GO:1902290: positive regulation of defense response to oomycetes1.50E-03
46GO:0045017: glycerolipid biosynthetic process1.50E-03
47GO:0006825: copper ion transport1.53E-03
48GO:0016998: cell wall macromolecule catabolic process1.68E-03
49GO:0006085: acetyl-CoA biosynthetic process2.01E-03
50GO:0006621: protein retention in ER lumen2.01E-03
51GO:0010508: positive regulation of autophagy2.01E-03
52GO:0010188: response to microbial phytotoxin2.01E-03
53GO:0010222: stem vascular tissue pattern formation2.01E-03
54GO:0050832: defense response to fungus2.22E-03
55GO:0030308: negative regulation of cell growth2.56E-03
56GO:0009164: nucleoside catabolic process2.56E-03
57GO:0097428: protein maturation by iron-sulfur cluster transfer2.56E-03
58GO:1900425: negative regulation of defense response to bacterium3.16E-03
59GO:0009759: indole glucosinolate biosynthetic process3.16E-03
60GO:0010942: positive regulation of cell death3.16E-03
61GO:0009620: response to fungus3.17E-03
62GO:0009942: longitudinal axis specification3.81E-03
63GO:0010200: response to chitin3.97E-03
64GO:1900056: negative regulation of leaf senescence4.49E-03
65GO:0050829: defense response to Gram-negative bacterium4.49E-03
66GO:0015937: coenzyme A biosynthetic process4.49E-03
67GO:1900057: positive regulation of leaf senescence4.49E-03
68GO:0010038: response to metal ion4.49E-03
69GO:0010044: response to aluminum ion4.49E-03
70GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.49E-03
71GO:0009610: response to symbiotic fungus4.49E-03
72GO:0046470: phosphatidylcholine metabolic process4.49E-03
73GO:0043090: amino acid import4.49E-03
74GO:0009058: biosynthetic process5.07E-03
75GO:0009816: defense response to bacterium, incompatible interaction5.16E-03
76GO:0009787: regulation of abscisic acid-activated signaling pathway5.21E-03
77GO:1900150: regulation of defense response to fungus5.21E-03
78GO:0019375: galactolipid biosynthetic process5.21E-03
79GO:0016559: peroxisome fission5.21E-03
80GO:0006644: phospholipid metabolic process5.21E-03
81GO:0010497: plasmodesmata-mediated intercellular transport5.98E-03
82GO:0010120: camalexin biosynthetic process5.98E-03
83GO:0010204: defense response signaling pathway, resistance gene-independent5.98E-03
84GO:0009751: response to salicylic acid6.67E-03
85GO:0019432: triglyceride biosynthetic process6.77E-03
86GO:0009821: alkaloid biosynthetic process6.77E-03
87GO:0030042: actin filament depolymerization7.60E-03
88GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.60E-03
89GO:2000280: regulation of root development7.60E-03
90GO:1900426: positive regulation of defense response to bacterium7.60E-03
91GO:0043069: negative regulation of programmed cell death8.48E-03
92GO:0010215: cellulose microfibril organization8.48E-03
93GO:0030148: sphingolipid biosynthetic process9.38E-03
94GO:0006897: endocytosis9.61E-03
95GO:0045037: protein import into chloroplast stroma1.03E-02
96GO:0071365: cellular response to auxin stimulus1.03E-02
97GO:0051707: response to other organism1.04E-02
98GO:0006952: defense response1.08E-02
99GO:2000012: regulation of auxin polar transport1.13E-02
100GO:0010102: lateral root morphogenesis1.13E-02
101GO:0034605: cellular response to heat1.23E-02
102GO:0002237: response to molecule of bacterial origin1.23E-02
103GO:0007034: vacuolar transport1.23E-02
104GO:0010167: response to nitrate1.33E-02
105GO:0070588: calcium ion transmembrane transport1.33E-02
106GO:0007031: peroxisome organization1.33E-02
107GO:0009809: lignin biosynthetic process1.41E-02
108GO:0009863: salicylic acid mediated signaling pathway1.55E-02
109GO:0030150: protein import into mitochondrial matrix1.55E-02
110GO:0005992: trehalose biosynthetic process1.55E-02
111GO:0051302: regulation of cell division1.66E-02
112GO:0048278: vesicle docking1.78E-02
113GO:0009626: plant-type hypersensitive response1.78E-02
114GO:0015992: proton transport1.78E-02
115GO:0031348: negative regulation of defense response1.90E-02
116GO:0071456: cellular response to hypoxia1.90E-02
117GO:0030245: cellulose catabolic process1.90E-02
118GO:0009411: response to UV2.02E-02
119GO:0006012: galactose metabolic process2.02E-02
120GO:0045454: cell redox homeostasis2.06E-02
121GO:0010584: pollen exine formation2.14E-02
122GO:0019722: calcium-mediated signaling2.14E-02
123GO:0010089: xylem development2.14E-02
124GO:0070417: cellular response to cold2.27E-02
125GO:0000413: protein peptidyl-prolyl isomerization2.40E-02
126GO:0071472: cellular response to salt stress2.53E-02
127GO:0006662: glycerol ether metabolic process2.53E-02
128GO:0016042: lipid catabolic process2.58E-02
129GO:0008654: phospholipid biosynthetic process2.80E-02
130GO:0042744: hydrogen peroxide catabolic process2.87E-02
131GO:0009753: response to jasmonic acid2.92E-02
132GO:0071554: cell wall organization or biogenesis2.94E-02
133GO:0008152: metabolic process3.02E-02
134GO:0030163: protein catabolic process3.22E-02
135GO:0040008: regulation of growth3.32E-02
136GO:0006464: cellular protein modification process3.37E-02
137GO:0006914: autophagy3.37E-02
138GO:0010150: leaf senescence3.48E-02
139GO:0071805: potassium ion transmembrane transport3.51E-02
140GO:0051607: defense response to virus3.66E-02
141GO:0001666: response to hypoxia3.82E-02
142GO:0009615: response to virus3.82E-02
143GO:0009734: auxin-activated signaling pathway4.09E-02
144GO:0006906: vesicle fusion4.13E-02
145GO:0016311: dephosphorylation4.44E-02
146GO:0016049: cell growth4.44E-02
147GO:0042742: defense response to bacterium4.57E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0008320: protein transmembrane transporter activity4.97E-06
3GO:0005496: steroid binding8.98E-05
4GO:0071617: lysophospholipid acyltransferase activity2.94E-04
5GO:2001147: camalexin binding2.94E-04
6GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity2.94E-04
7GO:0004714: transmembrane receptor protein tyrosine kinase activity2.94E-04
8GO:2001227: quercitrin binding2.94E-04
9GO:0015927: trehalase activity2.94E-04
10GO:0004568: chitinase activity6.02E-04
11GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity6.45E-04
12GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity6.45E-04
13GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity6.45E-04
14GO:0050736: O-malonyltransferase activity6.45E-04
15GO:0045140: inositol phosphoceramide synthase activity6.45E-04
16GO:0004061: arylformamidase activity6.45E-04
17GO:0015036: disulfide oxidoreductase activity6.45E-04
18GO:0004594: pantothenate kinase activity6.45E-04
19GO:0005388: calcium-transporting ATPase activity8.98E-04
20GO:0016531: copper chaperone activity1.04E-03
21GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.04E-03
22GO:0004364: glutathione transferase activity1.48E-03
23GO:0022890: inorganic cation transmembrane transporter activity1.50E-03
24GO:0046923: ER retention sequence binding2.01E-03
25GO:0019199: transmembrane receptor protein kinase activity2.01E-03
26GO:0004737: pyruvate decarboxylase activity2.01E-03
27GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.01E-03
28GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.56E-03
29GO:0030976: thiamine pyrophosphate binding3.16E-03
30GO:0080043: quercetin 3-O-glucosyltransferase activity3.17E-03
31GO:0080044: quercetin 7-O-glucosyltransferase activity3.17E-03
32GO:0016746: transferase activity, transferring acyl groups3.70E-03
33GO:0003978: UDP-glucose 4-epimerase activity3.81E-03
34GO:0004602: glutathione peroxidase activity3.81E-03
35GO:0051920: peroxiredoxin activity3.81E-03
36GO:0043295: glutathione binding4.49E-03
37GO:0004620: phospholipase activity4.49E-03
38GO:0016831: carboxy-lyase activity4.49E-03
39GO:0043022: ribosome binding5.21E-03
40GO:0016209: antioxidant activity5.21E-03
41GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.98E-03
42GO:0004630: phospholipase D activity5.98E-03
43GO:0071949: FAD binding6.77E-03
44GO:0047617: acyl-CoA hydrolase activity7.60E-03
45GO:0030955: potassium ion binding7.60E-03
46GO:0016844: strictosidine synthase activity7.60E-03
47GO:0004743: pyruvate kinase activity7.60E-03
48GO:0008194: UDP-glycosyltransferase activity8.25E-03
49GO:0015020: glucuronosyltransferase activity8.48E-03
50GO:0004864: protein phosphatase inhibitor activity8.48E-03
51GO:0004713: protein tyrosine kinase activity8.48E-03
52GO:0004805: trehalose-phosphatase activity8.48E-03
53GO:0008171: O-methyltransferase activity8.48E-03
54GO:0015386: potassium:proton antiporter activity9.38E-03
55GO:0008794: arsenate reductase (glutaredoxin) activity9.38E-03
56GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.13E-02
57GO:0004022: alcohol dehydrogenase (NAD) activity1.13E-02
58GO:0004601: peroxidase activity1.25E-02
59GO:0004190: aspartic-type endopeptidase activity1.33E-02
60GO:0005509: calcium ion binding1.34E-02
61GO:0004725: protein tyrosine phosphatase activity1.44E-02
62GO:0051536: iron-sulfur cluster binding1.55E-02
63GO:0015079: potassium ion transmembrane transporter activity1.66E-02
64GO:0008810: cellulase activity2.02E-02
65GO:0016301: kinase activity2.02E-02
66GO:0015035: protein disulfide oxidoreductase activity2.07E-02
67GO:0047134: protein-disulfide reductase activity2.27E-02
68GO:0016758: transferase activity, transferring hexosyl groups2.45E-02
69GO:0015299: solute:proton antiporter activity2.66E-02
70GO:0010181: FMN binding2.66E-02
71GO:0050662: coenzyme binding2.66E-02
72GO:0004791: thioredoxin-disulfide reductase activity2.66E-02
73GO:0004872: receptor activity2.80E-02
74GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.22E-02
75GO:0016791: phosphatase activity3.37E-02
76GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.51E-02
77GO:0016413: O-acetyltransferase activity3.66E-02
78GO:0008375: acetylglucosaminyltransferase activity4.13E-02
79GO:0009931: calcium-dependent protein serine/threonine kinase activity4.13E-02
80GO:0004806: triglyceride lipase activity4.29E-02
81GO:0004721: phosphoprotein phosphatase activity4.29E-02
82GO:0004683: calmodulin-dependent protein kinase activity4.29E-02
83GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.44E-02
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Gene type



Gene DE type