GO Enrichment Analysis of Co-expressed Genes with
AT5G59020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 2 | GO:0036228: protein targeting to nuclear inner membrane | 3.12E-05 |
| 3 | GO:0006999: nuclear pore organization | 3.12E-05 |
| 4 | GO:0018022: peptidyl-lysine methylation | 7.88E-05 |
| 5 | GO:0010424: DNA methylation on cytosine within a CG sequence | 7.88E-05 |
| 6 | GO:0090309: positive regulation of methylation-dependent chromatin silencing | 7.88E-05 |
| 7 | GO:0032776: DNA methylation on cytosine | 1.37E-04 |
| 8 | GO:0006168: adenine salvage | 2.04E-04 |
| 9 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 2.04E-04 |
| 10 | GO:0006166: purine ribonucleoside salvage | 2.04E-04 |
| 11 | GO:0009855: determination of bilateral symmetry | 2.04E-04 |
| 12 | GO:1900864: mitochondrial RNA modification | 2.76E-04 |
| 13 | GO:0071249: cellular response to nitrate | 2.76E-04 |
| 14 | GO:0044209: AMP salvage | 3.53E-04 |
| 15 | GO:1901371: regulation of leaf morphogenesis | 4.34E-04 |
| 16 | GO:0035435: phosphate ion transmembrane transport | 4.34E-04 |
| 17 | GO:0010014: meristem initiation | 5.20E-04 |
| 18 | GO:0009955: adaxial/abaxial pattern specification | 5.20E-04 |
| 19 | GO:1901001: negative regulation of response to salt stress | 5.20E-04 |
| 20 | GO:0000911: cytokinesis by cell plate formation | 5.20E-04 |
| 21 | GO:0080060: integument development | 5.20E-04 |
| 22 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 6.99E-04 |
| 23 | GO:0006261: DNA-dependent DNA replication | 7.94E-04 |
| 24 | GO:0006607: NLS-bearing protein import into nucleus | 8.92E-04 |
| 25 | GO:0048507: meristem development | 8.92E-04 |
| 26 | GO:0010072: primary shoot apical meristem specification | 1.20E-03 |
| 27 | GO:0010216: maintenance of DNA methylation | 1.20E-03 |
| 28 | GO:0010152: pollen maturation | 1.31E-03 |
| 29 | GO:0010102: lateral root morphogenesis | 1.43E-03 |
| 30 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.92E-03 |
| 31 | GO:0000027: ribosomal large subunit assembly | 1.92E-03 |
| 32 | GO:0048443: stamen development | 2.61E-03 |
| 33 | GO:0051028: mRNA transport | 2.75E-03 |
| 34 | GO:0009414: response to water deprivation | 2.75E-03 |
| 35 | GO:0080022: primary root development | 2.90E-03 |
| 36 | GO:0010501: RNA secondary structure unwinding | 2.90E-03 |
| 37 | GO:0008360: regulation of cell shape | 3.05E-03 |
| 38 | GO:0009958: positive gravitropism | 3.05E-03 |
| 39 | GO:0046323: glucose import | 3.05E-03 |
| 40 | GO:0010305: leaf vascular tissue pattern formation | 3.05E-03 |
| 41 | GO:0002229: defense response to oomycetes | 3.51E-03 |
| 42 | GO:0010090: trichome morphogenesis | 3.84E-03 |
| 43 | GO:0048527: lateral root development | 5.99E-03 |
| 44 | GO:0009910: negative regulation of flower development | 5.99E-03 |
| 45 | GO:0006897: endocytosis | 7.19E-03 |
| 46 | GO:0009908: flower development | 7.52E-03 |
| 47 | GO:0009640: photomorphogenesis | 7.60E-03 |
| 48 | GO:0009965: leaf morphogenesis | 8.24E-03 |
| 49 | GO:0006457: protein folding | 1.08E-02 |
| 50 | GO:0016569: covalent chromatin modification | 1.15E-02 |
| 51 | GO:0018105: peptidyl-serine phosphorylation | 1.22E-02 |
| 52 | GO:0009651: response to salt stress | 1.32E-02 |
| 53 | GO:0009790: embryo development | 1.57E-02 |
| 54 | GO:0010150: leaf senescence | 1.77E-02 |
| 55 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.82E-02 |
| 56 | GO:0009739: response to gibberellin | 1.91E-02 |
| 57 | GO:0007166: cell surface receptor signaling pathway | 1.94E-02 |
| 58 | GO:0009409: response to cold | 2.29E-02 |
| 59 | GO:0009658: chloroplast organization | 2.41E-02 |
| 60 | GO:0006970: response to osmotic stress | 2.54E-02 |
| 61 | GO:0009751: response to salicylic acid | 3.67E-02 |
| 62 | GO:0006468: protein phosphorylation | 3.75E-02 |
| 63 | GO:0048364: root development | 3.82E-02 |
| 64 | GO:0009873: ethylene-activated signaling pathway | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016805: dipeptidase activity | 1.37E-04 |
| 2 | GO:0010429: methyl-CpNpN binding | 1.37E-04 |
| 3 | GO:0004180: carboxypeptidase activity | 1.37E-04 |
| 4 | GO:0010428: methyl-CpNpG binding | 1.37E-04 |
| 5 | GO:0070181: small ribosomal subunit rRNA binding | 1.37E-04 |
| 6 | GO:0003999: adenine phosphoribosyltransferase activity | 2.04E-04 |
| 7 | GO:0003883: CTP synthase activity | 2.04E-04 |
| 8 | GO:0005354: galactose transmembrane transporter activity | 2.04E-04 |
| 9 | GO:0016279: protein-lysine N-methyltransferase activity | 2.76E-04 |
| 10 | GO:0010011: auxin binding | 2.76E-04 |
| 11 | GO:0017056: structural constituent of nuclear pore | 6.99E-04 |
| 12 | GO:0005487: nucleocytoplasmic transporter activity | 9.92E-04 |
| 13 | GO:0004713: protein tyrosine kinase activity | 1.10E-03 |
| 14 | GO:0008327: methyl-CpG binding | 1.20E-03 |
| 15 | GO:0015114: phosphate ion transmembrane transporter activity | 1.43E-03 |
| 16 | GO:0004527: exonuclease activity | 3.05E-03 |
| 17 | GO:0008080: N-acetyltransferase activity | 3.05E-03 |
| 18 | GO:0005355: glucose transmembrane transporter activity | 3.20E-03 |
| 19 | GO:0016759: cellulose synthase activity | 4.00E-03 |
| 20 | GO:0004004: ATP-dependent RNA helicase activity | 5.05E-03 |
| 21 | GO:0003697: single-stranded DNA binding | 6.38E-03 |
| 22 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 6.77E-03 |
| 23 | GO:0003735: structural constituent of ribosome | 6.77E-03 |
| 24 | GO:0003690: double-stranded DNA binding | 9.59E-03 |
| 25 | GO:0022857: transmembrane transporter activity | 1.15E-02 |
| 26 | GO:0051082: unfolded protein binding | 1.20E-02 |
| 27 | GO:0008026: ATP-dependent helicase activity | 1.25E-02 |
| 28 | GO:0015144: carbohydrate transmembrane transporter activity | 1.60E-02 |
| 29 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.68E-02 |
| 30 | GO:0005351: sugar:proton symporter activity | 1.74E-02 |
| 31 | GO:0004674: protein serine/threonine kinase activity | 2.14E-02 |
| 32 | GO:0046983: protein dimerization activity | 2.26E-02 |
| 33 | GO:0004842: ubiquitin-protein transferase activity | 2.34E-02 |
| 34 | GO:0004672: protein kinase activity | 2.49E-02 |
| 35 | GO:0061630: ubiquitin protein ligase activity | 2.91E-02 |
| 36 | GO:0004871: signal transducer activity | 3.30E-02 |
| 37 | GO:0003677: DNA binding | 3.68E-02 |
| 38 | GO:0003723: RNA binding | 3.79E-02 |
| 39 | GO:0008289: lipid binding | 4.69E-02 |