GO Enrichment Analysis of Co-expressed Genes with
AT5G58480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046396: D-galacturonate metabolic process | 0.00E+00 |
| 2 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 3 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 8 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 9 | GO:0009658: chloroplast organization | 9.23E-07 |
| 10 | GO:0048528: post-embryonic root development | 1.03E-04 |
| 11 | GO:0070413: trehalose metabolism in response to stress | 1.32E-04 |
| 12 | GO:0009657: plastid organization | 1.65E-04 |
| 13 | GO:0042371: vitamin K biosynthetic process | 1.73E-04 |
| 14 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.73E-04 |
| 15 | GO:0005991: trehalose metabolic process | 1.73E-04 |
| 16 | GO:0006747: FAD biosynthetic process | 1.73E-04 |
| 17 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.73E-04 |
| 18 | GO:2000025: regulation of leaf formation | 1.73E-04 |
| 19 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.73E-04 |
| 20 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.73E-04 |
| 21 | GO:0070509: calcium ion import | 1.73E-04 |
| 22 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 3.92E-04 |
| 23 | GO:0001682: tRNA 5'-leader removal | 3.92E-04 |
| 24 | GO:0006739: NADP metabolic process | 3.92E-04 |
| 25 | GO:0060359: response to ammonium ion | 3.92E-04 |
| 26 | GO:1900871: chloroplast mRNA modification | 3.92E-04 |
| 27 | GO:0010020: chloroplast fission | 4.87E-04 |
| 28 | GO:0010207: photosystem II assembly | 4.87E-04 |
| 29 | GO:0001578: microtubule bundle formation | 6.40E-04 |
| 30 | GO:0043157: response to cation stress | 6.40E-04 |
| 31 | GO:0005977: glycogen metabolic process | 6.40E-04 |
| 32 | GO:0045910: negative regulation of DNA recombination | 6.40E-04 |
| 33 | GO:0048281: inflorescence morphogenesis | 6.40E-04 |
| 34 | GO:0006954: inflammatory response | 6.40E-04 |
| 35 | GO:0010623: programmed cell death involved in cell development | 6.40E-04 |
| 36 | GO:0005992: trehalose biosynthetic process | 6.71E-04 |
| 37 | GO:0006418: tRNA aminoacylation for protein translation | 7.39E-04 |
| 38 | GO:0006730: one-carbon metabolic process | 8.83E-04 |
| 39 | GO:0043572: plastid fission | 9.13E-04 |
| 40 | GO:0051085: chaperone mediated protein folding requiring cofactor | 9.13E-04 |
| 41 | GO:0010148: transpiration | 9.13E-04 |
| 42 | GO:0010306: rhamnogalacturonan II biosynthetic process | 9.13E-04 |
| 43 | GO:0009226: nucleotide-sugar biosynthetic process | 9.13E-04 |
| 44 | GO:0008615: pyridoxine biosynthetic process | 9.13E-04 |
| 45 | GO:0010021: amylopectin biosynthetic process | 1.21E-03 |
| 46 | GO:0051322: anaphase | 1.21E-03 |
| 47 | GO:0010508: positive regulation of autophagy | 1.21E-03 |
| 48 | GO:0007020: microtubule nucleation | 1.21E-03 |
| 49 | GO:0006734: NADH metabolic process | 1.21E-03 |
| 50 | GO:0044205: 'de novo' UMP biosynthetic process | 1.21E-03 |
| 51 | GO:0010236: plastoquinone biosynthetic process | 1.54E-03 |
| 52 | GO:0009107: lipoate biosynthetic process | 1.54E-03 |
| 53 | GO:0010158: abaxial cell fate specification | 1.54E-03 |
| 54 | GO:0046785: microtubule polymerization | 1.54E-03 |
| 55 | GO:0032543: mitochondrial translation | 1.54E-03 |
| 56 | GO:0050665: hydrogen peroxide biosynthetic process | 1.89E-03 |
| 57 | GO:0009959: negative gravitropism | 1.89E-03 |
| 58 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.89E-03 |
| 59 | GO:0032973: amino acid export | 1.89E-03 |
| 60 | GO:0009790: embryo development | 2.19E-03 |
| 61 | GO:0009854: oxidative photosynthetic carbon pathway | 2.27E-03 |
| 62 | GO:0009648: photoperiodism | 2.27E-03 |
| 63 | GO:0046835: carbohydrate phosphorylation | 2.27E-03 |
| 64 | GO:0042026: protein refolding | 2.27E-03 |
| 65 | GO:0042372: phylloquinone biosynthetic process | 2.27E-03 |
| 66 | GO:0009942: longitudinal axis specification | 2.27E-03 |
| 67 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 68 | GO:0010103: stomatal complex morphogenesis | 2.67E-03 |
| 69 | GO:0009772: photosynthetic electron transport in photosystem II | 2.67E-03 |
| 70 | GO:0043090: amino acid import | 2.67E-03 |
| 71 | GO:0010050: vegetative phase change | 2.67E-03 |
| 72 | GO:0070370: cellular heat acclimation | 2.67E-03 |
| 73 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.67E-03 |
| 74 | GO:0000105: histidine biosynthetic process | 3.09E-03 |
| 75 | GO:0009231: riboflavin biosynthetic process | 3.09E-03 |
| 76 | GO:0048564: photosystem I assembly | 3.09E-03 |
| 77 | GO:0009850: auxin metabolic process | 3.09E-03 |
| 78 | GO:0006508: proteolysis | 3.23E-03 |
| 79 | GO:0010204: defense response signaling pathway, resistance gene-independent | 3.54E-03 |
| 80 | GO:0007389: pattern specification process | 3.54E-03 |
| 81 | GO:0009827: plant-type cell wall modification | 3.54E-03 |
| 82 | GO:0001558: regulation of cell growth | 3.54E-03 |
| 83 | GO:0000373: Group II intron splicing | 4.00E-03 |
| 84 | GO:0006098: pentose-phosphate shunt | 4.00E-03 |
| 85 | GO:0080144: amino acid homeostasis | 4.00E-03 |
| 86 | GO:0009638: phototropism | 4.49E-03 |
| 87 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 4.49E-03 |
| 88 | GO:0006298: mismatch repair | 4.99E-03 |
| 89 | GO:0006949: syncytium formation | 4.99E-03 |
| 90 | GO:0006259: DNA metabolic process | 4.99E-03 |
| 91 | GO:0006265: DNA topological change | 5.52E-03 |
| 92 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.52E-03 |
| 93 | GO:0009793: embryo development ending in seed dormancy | 5.62E-03 |
| 94 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.06E-03 |
| 95 | GO:0045037: protein import into chloroplast stroma | 6.06E-03 |
| 96 | GO:0010582: floral meristem determinacy | 6.06E-03 |
| 97 | GO:0009664: plant-type cell wall organization | 6.10E-03 |
| 98 | GO:0006364: rRNA processing | 6.55E-03 |
| 99 | GO:0006094: gluconeogenesis | 6.61E-03 |
| 100 | GO:0009785: blue light signaling pathway | 6.61E-03 |
| 101 | GO:0051603: proteolysis involved in cellular protein catabolic process | 6.78E-03 |
| 102 | GO:0090351: seedling development | 7.79E-03 |
| 103 | GO:0070588: calcium ion transmembrane transport | 7.79E-03 |
| 104 | GO:0071732: cellular response to nitric oxide | 7.79E-03 |
| 105 | GO:0000162: tryptophan biosynthetic process | 8.41E-03 |
| 106 | GO:0009116: nucleoside metabolic process | 9.03E-03 |
| 107 | GO:0030150: protein import into mitochondrial matrix | 9.03E-03 |
| 108 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.03E-03 |
| 109 | GO:0007010: cytoskeleton organization | 9.03E-03 |
| 110 | GO:0051302: regulation of cell division | 9.69E-03 |
| 111 | GO:0043622: cortical microtubule organization | 9.69E-03 |
| 112 | GO:0015992: proton transport | 1.03E-02 |
| 113 | GO:0007005: mitochondrion organization | 1.10E-02 |
| 114 | GO:0031348: negative regulation of defense response | 1.10E-02 |
| 115 | GO:0071369: cellular response to ethylene stimulus | 1.17E-02 |
| 116 | GO:0001944: vasculature development | 1.17E-02 |
| 117 | GO:0006012: galactose metabolic process | 1.17E-02 |
| 118 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.17E-02 |
| 119 | GO:0009686: gibberellin biosynthetic process | 1.17E-02 |
| 120 | GO:0010082: regulation of root meristem growth | 1.17E-02 |
| 121 | GO:0010089: xylem development | 1.24E-02 |
| 122 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.32E-02 |
| 123 | GO:0008033: tRNA processing | 1.39E-02 |
| 124 | GO:0048653: anther development | 1.39E-02 |
| 125 | GO:0006662: glycerol ether metabolic process | 1.47E-02 |
| 126 | GO:0010182: sugar mediated signaling pathway | 1.47E-02 |
| 127 | GO:0048868: pollen tube development | 1.47E-02 |
| 128 | GO:0010268: brassinosteroid homeostasis | 1.47E-02 |
| 129 | GO:0007059: chromosome segregation | 1.54E-02 |
| 130 | GO:0009734: auxin-activated signaling pathway | 1.57E-02 |
| 131 | GO:0019252: starch biosynthetic process | 1.62E-02 |
| 132 | GO:0008654: phospholipid biosynthetic process | 1.62E-02 |
| 133 | GO:0016132: brassinosteroid biosynthetic process | 1.70E-02 |
| 134 | GO:0002229: defense response to oomycetes | 1.70E-02 |
| 135 | GO:0000302: response to reactive oxygen species | 1.70E-02 |
| 136 | GO:0009630: gravitropism | 1.78E-02 |
| 137 | GO:0010583: response to cyclopentenone | 1.78E-02 |
| 138 | GO:0071281: cellular response to iron ion | 1.87E-02 |
| 139 | GO:0009828: plant-type cell wall loosening | 1.95E-02 |
| 140 | GO:0016125: sterol metabolic process | 1.95E-02 |
| 141 | GO:0010252: auxin homeostasis | 1.95E-02 |
| 142 | GO:0006464: cellular protein modification process | 1.95E-02 |
| 143 | GO:0009416: response to light stimulus | 2.11E-02 |
| 144 | GO:0000910: cytokinesis | 2.12E-02 |
| 145 | GO:0001666: response to hypoxia | 2.21E-02 |
| 146 | GO:0009627: systemic acquired resistance | 2.39E-02 |
| 147 | GO:0042254: ribosome biogenesis | 2.56E-02 |
| 148 | GO:0008219: cell death | 2.67E-02 |
| 149 | GO:0048481: plant ovule development | 2.67E-02 |
| 150 | GO:0005975: carbohydrate metabolic process | 2.75E-02 |
| 151 | GO:0009832: plant-type cell wall biogenesis | 2.77E-02 |
| 152 | GO:0006811: ion transport | 2.87E-02 |
| 153 | GO:0048366: leaf development | 2.95E-02 |
| 154 | GO:0009853: photorespiration | 3.16E-02 |
| 155 | GO:0045087: innate immune response | 3.16E-02 |
| 156 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.22E-02 |
| 157 | GO:0034599: cellular response to oxidative stress | 3.27E-02 |
| 158 | GO:0006839: mitochondrial transport | 3.47E-02 |
| 159 | GO:0006631: fatty acid metabolic process | 3.58E-02 |
| 160 | GO:0009926: auxin polar transport | 3.79E-02 |
| 161 | GO:0051707: response to other organism | 3.79E-02 |
| 162 | GO:0008283: cell proliferation | 3.79E-02 |
| 163 | GO:0009965: leaf morphogenesis | 4.12E-02 |
| 164 | GO:0006855: drug transmembrane transport | 4.23E-02 |
| 165 | GO:0006812: cation transport | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 2 | GO:0015267: channel activity | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0047912: galacturonokinase activity | 0.00E+00 |
| 6 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 7 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 8 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 9 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.45E-06 |
| 10 | GO:0004176: ATP-dependent peptidase activity | 4.54E-05 |
| 11 | GO:0052857: NADPHX epimerase activity | 1.73E-04 |
| 12 | GO:0004830: tryptophan-tRNA ligase activity | 1.73E-04 |
| 13 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 1.73E-04 |
| 14 | GO:0005227: calcium activated cation channel activity | 1.73E-04 |
| 15 | GO:0004733: pyridoxamine-phosphate oxidase activity | 1.73E-04 |
| 16 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.73E-04 |
| 17 | GO:0051777: ent-kaurenoate oxidase activity | 1.73E-04 |
| 18 | GO:0052856: NADHX epimerase activity | 1.73E-04 |
| 19 | GO:0017118: lipoyltransferase activity | 3.92E-04 |
| 20 | GO:0016415: octanoyltransferase activity | 3.92E-04 |
| 21 | GO:0003919: FMN adenylyltransferase activity | 3.92E-04 |
| 22 | GO:0019156: isoamylase activity | 3.92E-04 |
| 23 | GO:0070330: aromatase activity | 6.40E-04 |
| 24 | GO:0002161: aminoacyl-tRNA editing activity | 6.40E-04 |
| 25 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 9.13E-04 |
| 26 | GO:0001872: (1->3)-beta-D-glucan binding | 9.13E-04 |
| 27 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 9.13E-04 |
| 28 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 9.13E-04 |
| 29 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 9.13E-04 |
| 30 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 9.13E-04 |
| 31 | GO:0004812: aminoacyl-tRNA ligase activity | 1.12E-03 |
| 32 | GO:0042277: peptide binding | 1.21E-03 |
| 33 | GO:0008891: glycolate oxidase activity | 1.21E-03 |
| 34 | GO:0004335: galactokinase activity | 1.21E-03 |
| 35 | GO:0004659: prenyltransferase activity | 1.21E-03 |
| 36 | GO:0019199: transmembrane receptor protein kinase activity | 1.21E-03 |
| 37 | GO:0009011: starch synthase activity | 1.21E-03 |
| 38 | GO:0010181: FMN binding | 1.40E-03 |
| 39 | GO:0018685: alkane 1-monooxygenase activity | 1.54E-03 |
| 40 | GO:0030983: mismatched DNA binding | 1.89E-03 |
| 41 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.89E-03 |
| 42 | GO:0080030: methyl indole-3-acetate esterase activity | 1.89E-03 |
| 43 | GO:0004332: fructose-bisphosphate aldolase activity | 1.89E-03 |
| 44 | GO:0004526: ribonuclease P activity | 1.89E-03 |
| 45 | GO:0004556: alpha-amylase activity | 1.89E-03 |
| 46 | GO:0003684: damaged DNA binding | 1.93E-03 |
| 47 | GO:0016791: phosphatase activity | 1.93E-03 |
| 48 | GO:0016829: lyase activity | 1.99E-03 |
| 49 | GO:0008237: metallopeptidase activity | 2.05E-03 |
| 50 | GO:0004427: inorganic diphosphatase activity | 2.67E-03 |
| 51 | GO:0043022: ribosome binding | 3.09E-03 |
| 52 | GO:0004222: metalloendopeptidase activity | 3.29E-03 |
| 53 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.54E-03 |
| 54 | GO:0016887: ATPase activity | 4.15E-03 |
| 55 | GO:0009672: auxin:proton symporter activity | 4.49E-03 |
| 56 | GO:0004185: serine-type carboxypeptidase activity | 4.86E-03 |
| 57 | GO:0004805: trehalose-phosphatase activity | 4.99E-03 |
| 58 | GO:0044183: protein binding involved in protein folding | 5.52E-03 |
| 59 | GO:0005262: calcium channel activity | 6.61E-03 |
| 60 | GO:0004565: beta-galactosidase activity | 6.61E-03 |
| 61 | GO:0010329: auxin efflux transmembrane transporter activity | 6.61E-03 |
| 62 | GO:0015266: protein channel activity | 6.61E-03 |
| 63 | GO:0003887: DNA-directed DNA polymerase activity | 8.41E-03 |
| 64 | GO:0004650: polygalacturonase activity | 8.51E-03 |
| 65 | GO:0003924: GTPase activity | 1.02E-02 |
| 66 | GO:0008408: 3'-5' exonuclease activity | 1.03E-02 |
| 67 | GO:0030570: pectate lyase activity | 1.17E-02 |
| 68 | GO:0047134: protein-disulfide reductase activity | 1.32E-02 |
| 69 | GO:0004527: exonuclease activity | 1.47E-02 |
| 70 | GO:0004791: thioredoxin-disulfide reductase activity | 1.54E-02 |
| 71 | GO:0008017: microtubule binding | 1.69E-02 |
| 72 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.87E-02 |
| 73 | GO:0046872: metal ion binding | 1.98E-02 |
| 74 | GO:0008483: transaminase activity | 2.04E-02 |
| 75 | GO:0030247: polysaccharide binding | 2.48E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 2.56E-02 |
| 77 | GO:0008236: serine-type peptidase activity | 2.58E-02 |
| 78 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.67E-02 |
| 79 | GO:0015238: drug transmembrane transporter activity | 2.77E-02 |
| 80 | GO:0020037: heme binding | 2.92E-02 |
| 81 | GO:0005525: GTP binding | 3.91E-02 |
| 82 | GO:0043621: protein self-association | 4.01E-02 |
| 83 | GO:0005198: structural molecule activity | 4.12E-02 |
| 84 | GO:0004519: endonuclease activity | 4.96E-02 |