GO Enrichment Analysis of Co-expressed Genes with
AT5G58440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 2 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 3 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 7 | GO:0007172: signal complex assembly | 0.00E+00 |
| 8 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 9 | GO:0071000: response to magnetism | 0.00E+00 |
| 10 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 11 | GO:0009638: phototropism | 5.02E-06 |
| 12 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.23E-04 |
| 13 | GO:0009723: response to ethylene | 1.55E-04 |
| 14 | GO:0072387: flavin adenine dinucleotide metabolic process | 1.64E-04 |
| 15 | GO:0006264: mitochondrial DNA replication | 1.64E-04 |
| 16 | GO:0033259: plastid DNA replication | 1.64E-04 |
| 17 | GO:0051171: regulation of nitrogen compound metabolic process | 1.64E-04 |
| 18 | GO:1902265: abscisic acid homeostasis | 1.64E-04 |
| 19 | GO:0010480: microsporocyte differentiation | 1.64E-04 |
| 20 | GO:0048829: root cap development | 2.65E-04 |
| 21 | GO:0030154: cell differentiation | 2.75E-04 |
| 22 | GO:0001736: establishment of planar polarity | 3.73E-04 |
| 23 | GO:0009786: regulation of asymmetric cell division | 3.73E-04 |
| 24 | GO:0010343: singlet oxygen-mediated programmed cell death | 3.73E-04 |
| 25 | GO:1901529: positive regulation of anion channel activity | 3.73E-04 |
| 26 | GO:0010617: circadian regulation of calcium ion oscillation | 3.73E-04 |
| 27 | GO:0099402: plant organ development | 3.73E-04 |
| 28 | GO:0006468: protein phosphorylation | 3.77E-04 |
| 29 | GO:0007623: circadian rhythm | 3.94E-04 |
| 30 | GO:0010075: regulation of meristem growth | 4.03E-04 |
| 31 | GO:0009785: blue light signaling pathway | 4.03E-04 |
| 32 | GO:0009934: regulation of meristem structural organization | 4.55E-04 |
| 33 | GO:0031022: nuclear migration along microfilament | 6.11E-04 |
| 34 | GO:0051127: positive regulation of actin nucleation | 6.11E-04 |
| 35 | GO:1902448: positive regulation of shade avoidance | 6.11E-04 |
| 36 | GO:0070475: rRNA base methylation | 6.11E-04 |
| 37 | GO:1901672: positive regulation of systemic acquired resistance | 6.11E-04 |
| 38 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 6.11E-04 |
| 39 | GO:0005992: trehalose biosynthetic process | 6.27E-04 |
| 40 | GO:0010187: negative regulation of seed germination | 6.27E-04 |
| 41 | GO:0009067: aspartate family amino acid biosynthetic process | 8.73E-04 |
| 42 | GO:0051513: regulation of monopolar cell growth | 8.73E-04 |
| 43 | GO:0007231: osmosensory signaling pathway | 8.73E-04 |
| 44 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 8.73E-04 |
| 45 | GO:0051639: actin filament network formation | 8.73E-04 |
| 46 | GO:0044211: CTP salvage | 8.73E-04 |
| 47 | GO:0009650: UV protection | 8.73E-04 |
| 48 | GO:0010255: glucose mediated signaling pathway | 8.73E-04 |
| 49 | GO:1901332: negative regulation of lateral root development | 8.73E-04 |
| 50 | GO:2000904: regulation of starch metabolic process | 8.73E-04 |
| 51 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.12E-03 |
| 52 | GO:0009165: nucleotide biosynthetic process | 1.16E-03 |
| 53 | GO:0051764: actin crosslink formation | 1.16E-03 |
| 54 | GO:0022622: root system development | 1.16E-03 |
| 55 | GO:0006552: leucine catabolic process | 1.16E-03 |
| 56 | GO:0044206: UMP salvage | 1.16E-03 |
| 57 | GO:0033500: carbohydrate homeostasis | 1.16E-03 |
| 58 | GO:0009740: gibberellic acid mediated signaling pathway | 1.16E-03 |
| 59 | GO:1902347: response to strigolactone | 1.16E-03 |
| 60 | GO:0009902: chloroplast relocation | 1.16E-03 |
| 61 | GO:0009958: positive gravitropism | 1.21E-03 |
| 62 | GO:0009646: response to absence of light | 1.30E-03 |
| 63 | GO:0032876: negative regulation of DNA endoreduplication | 1.47E-03 |
| 64 | GO:0071493: cellular response to UV-B | 1.47E-03 |
| 65 | GO:0010117: photoprotection | 1.47E-03 |
| 66 | GO:0046283: anthocyanin-containing compound metabolic process | 1.47E-03 |
| 67 | GO:0016310: phosphorylation | 1.68E-03 |
| 68 | GO:0009959: negative gravitropism | 1.80E-03 |
| 69 | GO:1901371: regulation of leaf morphogenesis | 1.80E-03 |
| 70 | GO:0006206: pyrimidine nucleobase metabolic process | 1.80E-03 |
| 71 | GO:0060918: auxin transport | 1.80E-03 |
| 72 | GO:0006139: nucleobase-containing compound metabolic process | 1.80E-03 |
| 73 | GO:0009751: response to salicylic acid | 1.87E-03 |
| 74 | GO:0009088: threonine biosynthetic process | 2.17E-03 |
| 75 | GO:0009648: photoperiodism | 2.17E-03 |
| 76 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.17E-03 |
| 77 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.17E-03 |
| 78 | GO:2000033: regulation of seed dormancy process | 2.17E-03 |
| 79 | GO:0009903: chloroplast avoidance movement | 2.17E-03 |
| 80 | GO:0010029: regulation of seed germination | 2.26E-03 |
| 81 | GO:0032880: regulation of protein localization | 2.55E-03 |
| 82 | GO:0010161: red light signaling pathway | 2.55E-03 |
| 83 | GO:0009610: response to symbiotic fungus | 2.55E-03 |
| 84 | GO:0048437: floral organ development | 2.55E-03 |
| 85 | GO:0022904: respiratory electron transport chain | 2.55E-03 |
| 86 | GO:0051510: regulation of unidimensional cell growth | 2.55E-03 |
| 87 | GO:0000160: phosphorelay signal transduction system | 2.93E-03 |
| 88 | GO:0010311: lateral root formation | 2.93E-03 |
| 89 | GO:0007166: cell surface receptor signaling pathway | 2.94E-03 |
| 90 | GO:0070413: trehalose metabolism in response to stress | 2.95E-03 |
| 91 | GO:0032875: regulation of DNA endoreduplication | 2.95E-03 |
| 92 | GO:0010099: regulation of photomorphogenesis | 3.37E-03 |
| 93 | GO:0006002: fructose 6-phosphate metabolic process | 3.37E-03 |
| 94 | GO:0009827: plant-type cell wall modification | 3.37E-03 |
| 95 | GO:0010100: negative regulation of photomorphogenesis | 3.37E-03 |
| 96 | GO:0032544: plastid translation | 3.37E-03 |
| 97 | GO:0007389: pattern specification process | 3.37E-03 |
| 98 | GO:0009637: response to blue light | 3.52E-03 |
| 99 | GO:0000902: cell morphogenesis | 3.81E-03 |
| 100 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.81E-03 |
| 101 | GO:0006783: heme biosynthetic process | 3.81E-03 |
| 102 | GO:0000373: Group II intron splicing | 3.81E-03 |
| 103 | GO:1900426: positive regulation of defense response to bacterium | 4.27E-03 |
| 104 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.27E-03 |
| 105 | GO:0009733: response to auxin | 4.39E-03 |
| 106 | GO:0009926: auxin polar transport | 4.53E-03 |
| 107 | GO:0010162: seed dormancy process | 4.75E-03 |
| 108 | GO:0009299: mRNA transcription | 4.75E-03 |
| 109 | GO:0006535: cysteine biosynthetic process from serine | 4.75E-03 |
| 110 | GO:0048229: gametophyte development | 5.25E-03 |
| 111 | GO:0048765: root hair cell differentiation | 5.25E-03 |
| 112 | GO:0006816: calcium ion transport | 5.25E-03 |
| 113 | GO:0009773: photosynthetic electron transport in photosystem I | 5.25E-03 |
| 114 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.25E-03 |
| 115 | GO:0009736: cytokinin-activated signaling pathway | 6.10E-03 |
| 116 | GO:0030036: actin cytoskeleton organization | 6.30E-03 |
| 117 | GO:0009725: response to hormone | 6.30E-03 |
| 118 | GO:2000012: regulation of auxin polar transport | 6.30E-03 |
| 119 | GO:0030048: actin filament-based movement | 6.30E-03 |
| 120 | GO:0010628: positive regulation of gene expression | 6.30E-03 |
| 121 | GO:0006006: glucose metabolic process | 6.30E-03 |
| 122 | GO:0070588: calcium ion transmembrane transport | 7.41E-03 |
| 123 | GO:0006355: regulation of transcription, DNA-templated | 7.98E-03 |
| 124 | GO:2000377: regulation of reactive oxygen species metabolic process | 8.59E-03 |
| 125 | GO:0019344: cysteine biosynthetic process | 8.59E-03 |
| 126 | GO:0051017: actin filament bundle assembly | 8.59E-03 |
| 127 | GO:0003333: amino acid transmembrane transport | 9.84E-03 |
| 128 | GO:0009753: response to jasmonic acid | 1.02E-02 |
| 129 | GO:0006730: one-carbon metabolic process | 1.05E-02 |
| 130 | GO:0009686: gibberellin biosynthetic process | 1.11E-02 |
| 131 | GO:0008284: positive regulation of cell proliferation | 1.25E-02 |
| 132 | GO:0010087: phloem or xylem histogenesis | 1.32E-02 |
| 133 | GO:0010118: stomatal movement | 1.32E-02 |
| 134 | GO:0048653: anther development | 1.32E-02 |
| 135 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.33E-02 |
| 136 | GO:0010182: sugar mediated signaling pathway | 1.39E-02 |
| 137 | GO:0040008: regulation of growth | 1.44E-02 |
| 138 | GO:0009734: auxin-activated signaling pathway | 1.44E-02 |
| 139 | GO:0007018: microtubule-based movement | 1.47E-02 |
| 140 | GO:0042752: regulation of circadian rhythm | 1.47E-02 |
| 141 | GO:0009739: response to gibberellin | 1.69E-02 |
| 142 | GO:0009735: response to cytokinin | 1.72E-02 |
| 143 | GO:0071281: cellular response to iron ion | 1.77E-02 |
| 144 | GO:0009738: abscisic acid-activated signaling pathway | 1.85E-02 |
| 145 | GO:0010252: auxin homeostasis | 1.86E-02 |
| 146 | GO:0009416: response to light stimulus | 1.92E-02 |
| 147 | GO:0071805: potassium ion transmembrane transport | 1.94E-02 |
| 148 | GO:0051607: defense response to virus | 2.02E-02 |
| 149 | GO:0015995: chlorophyll biosynthetic process | 2.36E-02 |
| 150 | GO:0048573: photoperiodism, flowering | 2.36E-02 |
| 151 | GO:0018298: protein-chromophore linkage | 2.54E-02 |
| 152 | GO:0006811: ion transport | 2.72E-02 |
| 153 | GO:0010218: response to far red light | 2.72E-02 |
| 154 | GO:0009910: negative regulation of flower development | 2.82E-02 |
| 155 | GO:0048527: lateral root development | 2.82E-02 |
| 156 | GO:0006865: amino acid transport | 2.91E-02 |
| 157 | GO:0009853: photorespiration | 3.01E-02 |
| 158 | GO:0046777: protein autophosphorylation | 3.09E-02 |
| 159 | GO:0006839: mitochondrial transport | 3.30E-02 |
| 160 | GO:0010114: response to red light | 3.60E-02 |
| 161 | GO:0008283: cell proliferation | 3.60E-02 |
| 162 | GO:0009640: photomorphogenesis | 3.60E-02 |
| 163 | GO:0009644: response to high light intensity | 3.81E-02 |
| 164 | GO:0008643: carbohydrate transport | 3.81E-02 |
| 165 | GO:0007165: signal transduction | 3.93E-02 |
| 166 | GO:0006855: drug transmembrane transport | 4.02E-02 |
| 167 | GO:0009737: response to abscisic acid | 4.06E-02 |
| 168 | GO:0031347: regulation of defense response | 4.12E-02 |
| 169 | GO:0006260: DNA replication | 4.12E-02 |
| 170 | GO:0016042: lipid catabolic process | 4.14E-02 |
| 171 | GO:0048364: root development | 4.44E-02 |
| 172 | GO:0009585: red, far-red light phototransduction | 4.45E-02 |
| 173 | GO:0006813: potassium ion transport | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 2 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 3 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 4 | GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | 0.00E+00 |
| 5 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 6 | GO:0016301: kinase activity | 1.05E-06 |
| 7 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.64E-04 |
| 8 | GO:0010313: phytochrome binding | 1.64E-04 |
| 9 | GO:0004805: trehalose-phosphatase activity | 2.65E-04 |
| 10 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.08E-04 |
| 11 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.52E-04 |
| 12 | GO:0050017: L-3-cyanoalanine synthase activity | 3.73E-04 |
| 13 | GO:0043425: bHLH transcription factor binding | 3.73E-04 |
| 14 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.73E-04 |
| 15 | GO:0033612: receptor serine/threonine kinase binding | 7.57E-04 |
| 16 | GO:0009882: blue light photoreceptor activity | 8.73E-04 |
| 17 | GO:0004072: aspartate kinase activity | 8.73E-04 |
| 18 | GO:0004674: protein serine/threonine kinase activity | 9.16E-04 |
| 19 | GO:0005524: ATP binding | 9.63E-04 |
| 20 | GO:0004845: uracil phosphoribosyltransferase activity | 1.16E-03 |
| 21 | GO:0010011: auxin binding | 1.16E-03 |
| 22 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.16E-03 |
| 23 | GO:0008409: 5'-3' exonuclease activity | 1.16E-03 |
| 24 | GO:0010328: auxin influx transmembrane transporter activity | 1.16E-03 |
| 25 | GO:0019199: transmembrane receptor protein kinase activity | 1.16E-03 |
| 26 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.47E-03 |
| 27 | GO:0000156: phosphorelay response regulator activity | 1.69E-03 |
| 28 | GO:0004252: serine-type endopeptidase activity | 1.88E-03 |
| 29 | GO:0004672: protein kinase activity | 1.99E-03 |
| 30 | GO:0004124: cysteine synthase activity | 2.17E-03 |
| 31 | GO:0004849: uridine kinase activity | 2.17E-03 |
| 32 | GO:0003872: 6-phosphofructokinase activity | 2.55E-03 |
| 33 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.37E-03 |
| 34 | GO:0044212: transcription regulatory region DNA binding | 3.58E-03 |
| 35 | GO:0071949: FAD binding | 3.81E-03 |
| 36 | GO:0009672: auxin:proton symporter activity | 4.27E-03 |
| 37 | GO:0004713: protein tyrosine kinase activity | 4.75E-03 |
| 38 | GO:0043621: protein self-association | 4.90E-03 |
| 39 | GO:0004089: carbonate dehydratase activity | 6.30E-03 |
| 40 | GO:0005262: calcium channel activity | 6.30E-03 |
| 41 | GO:0009982: pseudouridine synthase activity | 6.30E-03 |
| 42 | GO:0010329: auxin efflux transmembrane transporter activity | 6.30E-03 |
| 43 | GO:0008083: growth factor activity | 6.85E-03 |
| 44 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 7.12E-03 |
| 45 | GO:0042803: protein homodimerization activity | 7.55E-03 |
| 46 | GO:0003887: DNA-directed DNA polymerase activity | 8.00E-03 |
| 47 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 8.16E-03 |
| 48 | GO:0043565: sequence-specific DNA binding | 8.30E-03 |
| 49 | GO:0005345: purine nucleobase transmembrane transporter activity | 9.21E-03 |
| 50 | GO:0015079: potassium ion transmembrane transporter activity | 9.21E-03 |
| 51 | GO:0003727: single-stranded RNA binding | 1.18E-02 |
| 52 | GO:0008514: organic anion transmembrane transporter activity | 1.18E-02 |
| 53 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.33E-02 |
| 54 | GO:0001085: RNA polymerase II transcription factor binding | 1.39E-02 |
| 55 | GO:0010181: FMN binding | 1.47E-02 |
| 56 | GO:0005215: transporter activity | 1.55E-02 |
| 57 | GO:0051015: actin filament binding | 1.77E-02 |
| 58 | GO:0016791: phosphatase activity | 1.86E-02 |
| 59 | GO:0042802: identical protein binding | 1.92E-02 |
| 60 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 1.94E-02 |
| 61 | GO:0016597: amino acid binding | 2.02E-02 |
| 62 | GO:0004806: triglyceride lipase activity | 2.36E-02 |
| 63 | GO:0008236: serine-type peptidase activity | 2.45E-02 |
| 64 | GO:0015238: drug transmembrane transporter activity | 2.63E-02 |
| 65 | GO:0030246: carbohydrate binding | 2.79E-02 |
| 66 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.82E-02 |
| 67 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.20E-02 |
| 68 | GO:0050661: NADP binding | 3.30E-02 |
| 69 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.30E-02 |
| 70 | GO:0004871: signal transducer activity | 3.63E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.81E-02 |
| 72 | GO:0005515: protein binding | 3.84E-02 |
| 73 | GO:0015293: symporter activity | 3.91E-02 |
| 74 | GO:0003777: microtubule motor activity | 4.78E-02 |
| 75 | GO:0015171: amino acid transmembrane transporter activity | 4.78E-02 |