GO Enrichment Analysis of Co-expressed Genes with
AT5G58330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 2 | GO:0010335: response to non-ionic osmotic stress | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 6 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 7 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 8 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 9 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 10 | GO:0006982: response to lipid hydroperoxide | 0.00E+00 |
| 11 | GO:0015979: photosynthesis | 3.44E-07 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.25E-07 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.25E-07 |
| 14 | GO:0006000: fructose metabolic process | 2.36E-06 |
| 15 | GO:0009773: photosynthetic electron transport in photosystem I | 3.34E-06 |
| 16 | GO:0055114: oxidation-reduction process | 5.12E-06 |
| 17 | GO:0006094: gluconeogenesis | 5.41E-06 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 6.71E-06 |
| 19 | GO:0010207: photosystem II assembly | 6.71E-06 |
| 20 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.98E-06 |
| 21 | GO:0009658: chloroplast organization | 3.38E-05 |
| 22 | GO:0019252: starch biosynthetic process | 4.73E-05 |
| 23 | GO:0009704: de-etiolation | 6.58E-05 |
| 24 | GO:0006002: fructose 6-phosphate metabolic process | 8.31E-05 |
| 25 | GO:0006783: heme biosynthetic process | 1.03E-04 |
| 26 | GO:0043953: protein transport by the Tat complex | 1.10E-04 |
| 27 | GO:0071277: cellular response to calcium ion | 1.10E-04 |
| 28 | GO:0009090: homoserine biosynthetic process | 1.10E-04 |
| 29 | GO:0046467: membrane lipid biosynthetic process | 1.10E-04 |
| 30 | GO:0043489: RNA stabilization | 1.10E-04 |
| 31 | GO:0065002: intracellular protein transmembrane transport | 1.10E-04 |
| 32 | GO:0034337: RNA folding | 1.10E-04 |
| 33 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.24E-04 |
| 34 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.73E-04 |
| 35 | GO:0005986: sucrose biosynthetic process | 2.30E-04 |
| 36 | GO:0042819: vitamin B6 biosynthetic process | 2.57E-04 |
| 37 | GO:0035436: triose phosphate transmembrane transport | 4.25E-04 |
| 38 | GO:0009409: response to cold | 5.55E-04 |
| 39 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.10E-04 |
| 40 | GO:0033014: tetrapyrrole biosynthetic process | 6.10E-04 |
| 41 | GO:0008615: pyridoxine biosynthetic process | 6.10E-04 |
| 42 | GO:0009067: aspartate family amino acid biosynthetic process | 6.10E-04 |
| 43 | GO:0006020: inositol metabolic process | 6.10E-04 |
| 44 | GO:0071484: cellular response to light intensity | 6.10E-04 |
| 45 | GO:0042631: cellular response to water deprivation | 6.67E-04 |
| 46 | GO:0009765: photosynthesis, light harvesting | 8.10E-04 |
| 47 | GO:0045727: positive regulation of translation | 8.10E-04 |
| 48 | GO:0015994: chlorophyll metabolic process | 8.10E-04 |
| 49 | GO:0006536: glutamate metabolic process | 8.10E-04 |
| 50 | GO:0010600: regulation of auxin biosynthetic process | 8.10E-04 |
| 51 | GO:0015713: phosphoglycerate transport | 8.10E-04 |
| 52 | GO:0006546: glycine catabolic process | 8.10E-04 |
| 53 | GO:0006021: inositol biosynthetic process | 8.10E-04 |
| 54 | GO:0010021: amylopectin biosynthetic process | 8.10E-04 |
| 55 | GO:0015976: carbon utilization | 8.10E-04 |
| 56 | GO:0006656: phosphatidylcholine biosynthetic process | 1.02E-03 |
| 57 | GO:0043097: pyrimidine nucleoside salvage | 1.02E-03 |
| 58 | GO:0009107: lipoate biosynthetic process | 1.02E-03 |
| 59 | GO:0006206: pyrimidine nucleobase metabolic process | 1.25E-03 |
| 60 | GO:0046855: inositol phosphate dephosphorylation | 1.25E-03 |
| 61 | GO:0006796: phosphate-containing compound metabolic process | 1.25E-03 |
| 62 | GO:0009643: photosynthetic acclimation | 1.25E-03 |
| 63 | GO:0042549: photosystem II stabilization | 1.25E-03 |
| 64 | GO:0042742: defense response to bacterium | 1.33E-03 |
| 65 | GO:0015995: chlorophyll biosynthetic process | 1.46E-03 |
| 66 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.49E-03 |
| 67 | GO:1901259: chloroplast rRNA processing | 1.49E-03 |
| 68 | GO:0009854: oxidative photosynthetic carbon pathway | 1.49E-03 |
| 69 | GO:0009088: threonine biosynthetic process | 1.49E-03 |
| 70 | GO:0018298: protein-chromophore linkage | 1.61E-03 |
| 71 | GO:0009735: response to cytokinin | 1.70E-03 |
| 72 | GO:1900057: positive regulation of leaf senescence | 1.75E-03 |
| 73 | GO:0010161: red light signaling pathway | 1.75E-03 |
| 74 | GO:0009772: photosynthetic electron transport in photosystem II | 1.75E-03 |
| 75 | GO:0010928: regulation of auxin mediated signaling pathway | 2.03E-03 |
| 76 | GO:0034599: cellular response to oxidative stress | 2.13E-03 |
| 77 | GO:0071482: cellular response to light stimulus | 2.32E-03 |
| 78 | GO:0009657: plastid organization | 2.32E-03 |
| 79 | GO:0032544: plastid translation | 2.32E-03 |
| 80 | GO:0010206: photosystem II repair | 2.62E-03 |
| 81 | GO:0090333: regulation of stomatal closure | 2.62E-03 |
| 82 | GO:0006754: ATP biosynthetic process | 2.62E-03 |
| 83 | GO:0009086: methionine biosynthetic process | 2.93E-03 |
| 84 | GO:0010267: production of ta-siRNAs involved in RNA interference | 2.93E-03 |
| 85 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.25E-03 |
| 86 | GO:0045036: protein targeting to chloroplast | 3.25E-03 |
| 87 | GO:0019684: photosynthesis, light reaction | 3.59E-03 |
| 88 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.59E-03 |
| 89 | GO:0000272: polysaccharide catabolic process | 3.59E-03 |
| 90 | GO:0006790: sulfur compound metabolic process | 3.93E-03 |
| 91 | GO:0016925: protein sumoylation | 3.93E-03 |
| 92 | GO:0006807: nitrogen compound metabolic process | 4.30E-03 |
| 93 | GO:0018107: peptidyl-threonine phosphorylation | 4.30E-03 |
| 94 | GO:0009266: response to temperature stimulus | 4.66E-03 |
| 95 | GO:0006397: mRNA processing | 4.83E-03 |
| 96 | GO:0005985: sucrose metabolic process | 5.04E-03 |
| 97 | GO:0046854: phosphatidylinositol phosphorylation | 5.04E-03 |
| 98 | GO:0006396: RNA processing | 5.13E-03 |
| 99 | GO:0000027: ribosomal large subunit assembly | 5.84E-03 |
| 100 | GO:0006406: mRNA export from nucleus | 5.84E-03 |
| 101 | GO:0061077: chaperone-mediated protein folding | 6.67E-03 |
| 102 | GO:0010017: red or far-red light signaling pathway | 7.11E-03 |
| 103 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.11E-03 |
| 104 | GO:0019748: secondary metabolic process | 7.11E-03 |
| 105 | GO:0006633: fatty acid biosynthetic process | 7.82E-03 |
| 106 | GO:0007623: circadian rhythm | 8.60E-03 |
| 107 | GO:0006520: cellular amino acid metabolic process | 9.41E-03 |
| 108 | GO:0015986: ATP synthesis coupled proton transport | 9.91E-03 |
| 109 | GO:0006814: sodium ion transport | 9.91E-03 |
| 110 | GO:0009646: response to absence of light | 9.91E-03 |
| 111 | GO:0006810: transport | 1.02E-02 |
| 112 | GO:0009791: post-embryonic development | 1.04E-02 |
| 113 | GO:0005975: carbohydrate metabolic process | 1.07E-02 |
| 114 | GO:0000302: response to reactive oxygen species | 1.09E-02 |
| 115 | GO:0031047: gene silencing by RNA | 1.14E-02 |
| 116 | GO:0009567: double fertilization forming a zygote and endosperm | 1.25E-02 |
| 117 | GO:0042254: ribosome biogenesis | 1.36E-02 |
| 118 | GO:0010027: thylakoid membrane organization | 1.42E-02 |
| 119 | GO:0042128: nitrate assimilation | 1.53E-02 |
| 120 | GO:0044550: secondary metabolite biosynthetic process | 1.80E-02 |
| 121 | GO:0009407: toxin catabolic process | 1.83E-02 |
| 122 | GO:0009631: cold acclimation | 1.89E-02 |
| 123 | GO:0009853: photorespiration | 2.02E-02 |
| 124 | GO:0045087: innate immune response | 2.02E-02 |
| 125 | GO:0016051: carbohydrate biosynthetic process | 2.02E-02 |
| 126 | GO:0032259: methylation | 2.34E-02 |
| 127 | GO:0010114: response to red light | 2.42E-02 |
| 128 | GO:0000209: protein polyubiquitination | 2.49E-02 |
| 129 | GO:0009636: response to toxic substance | 2.63E-02 |
| 130 | GO:0042538: hyperosmotic salinity response | 2.85E-02 |
| 131 | GO:0006364: rRNA processing | 2.99E-02 |
| 132 | GO:0009585: red, far-red light phototransduction | 2.99E-02 |
| 133 | GO:0010224: response to UV-B | 3.07E-02 |
| 134 | GO:0006417: regulation of translation | 3.22E-02 |
| 135 | GO:0006096: glycolytic process | 3.37E-02 |
| 136 | GO:0009624: response to nematode | 3.85E-02 |
| 137 | GO:0018105: peptidyl-serine phosphorylation | 3.93E-02 |
| 138 | GO:0046686: response to cadmium ion | 4.01E-02 |
| 139 | GO:0009416: response to light stimulus | 4.33E-02 |
| 140 | GO:0009611: response to wounding | 4.42E-02 |
| 141 | GO:0009058: biosynthetic process | 4.69E-02 |
| 142 | GO:0009845: seed germination | 4.77E-02 |
| 143 | GO:0042744: hydrogen peroxide catabolic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 2 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 3 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 4 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 5 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 6 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 8 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 9 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.25E-07 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 6.25E-07 |
| 11 | GO:0019843: rRNA binding | 5.36E-06 |
| 12 | GO:0043495: protein anchor | 1.06E-05 |
| 13 | GO:0009011: starch synthase activity | 1.06E-05 |
| 14 | GO:0019899: enzyme binding | 5.05E-05 |
| 15 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 8.31E-05 |
| 16 | GO:0004325: ferrochelatase activity | 1.10E-04 |
| 17 | GO:0035671: enone reductase activity | 1.10E-04 |
| 18 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.10E-04 |
| 19 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.10E-04 |
| 20 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.57E-04 |
| 21 | GO:0033201: alpha-1,4-glucan synthase activity | 2.57E-04 |
| 22 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.57E-04 |
| 23 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.57E-04 |
| 24 | GO:0004412: homoserine dehydrogenase activity | 2.57E-04 |
| 25 | GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity | 2.57E-04 |
| 26 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.57E-04 |
| 27 | GO:0008883: glutamyl-tRNA reductase activity | 2.57E-04 |
| 28 | GO:0010297: heteropolysaccharide binding | 2.57E-04 |
| 29 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.57E-04 |
| 30 | GO:0004047: aminomethyltransferase activity | 2.57E-04 |
| 31 | GO:0008266: poly(U) RNA binding | 2.61E-04 |
| 32 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.25E-04 |
| 33 | GO:0004373: glycogen (starch) synthase activity | 4.25E-04 |
| 34 | GO:0016992: lipoate synthase activity | 4.25E-04 |
| 35 | GO:0050833: pyruvate transmembrane transporter activity | 4.25E-04 |
| 36 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.25E-04 |
| 37 | GO:0019948: SUMO activating enzyme activity | 4.25E-04 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 5.28E-04 |
| 39 | GO:0004072: aspartate kinase activity | 6.10E-04 |
| 40 | GO:0004351: glutamate decarboxylase activity | 6.10E-04 |
| 41 | GO:0008508: bile acid:sodium symporter activity | 6.10E-04 |
| 42 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.10E-04 |
| 43 | GO:0004332: fructose-bisphosphate aldolase activity | 1.25E-03 |
| 44 | GO:0004130: cytochrome-c peroxidase activity | 1.25E-03 |
| 45 | GO:0042578: phosphoric ester hydrolase activity | 1.25E-03 |
| 46 | GO:0016462: pyrophosphatase activity | 1.25E-03 |
| 47 | GO:0016168: chlorophyll binding | 1.32E-03 |
| 48 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.49E-03 |
| 49 | GO:0004849: uridine kinase activity | 1.49E-03 |
| 50 | GO:0042802: identical protein binding | 1.66E-03 |
| 51 | GO:0004427: inorganic diphosphatase activity | 1.75E-03 |
| 52 | GO:0003746: translation elongation factor activity | 2.04E-03 |
| 53 | GO:0008135: translation factor activity, RNA binding | 2.32E-03 |
| 54 | GO:0050661: NADP binding | 2.32E-03 |
| 55 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.82E-03 |
| 56 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.93E-03 |
| 57 | GO:0030234: enzyme regulator activity | 3.25E-03 |
| 58 | GO:0004565: beta-galactosidase activity | 4.30E-03 |
| 59 | GO:0004089: carbonate dehydratase activity | 4.30E-03 |
| 60 | GO:0005528: FK506 binding | 5.84E-03 |
| 61 | GO:0003727: single-stranded RNA binding | 8.00E-03 |
| 62 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 9.41E-03 |
| 63 | GO:0050662: coenzyme binding | 9.91E-03 |
| 64 | GO:0008483: transaminase activity | 1.30E-02 |
| 65 | GO:0016597: amino acid binding | 1.36E-02 |
| 66 | GO:0004222: metalloendopeptidase activity | 1.83E-02 |
| 67 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.89E-02 |
| 68 | GO:0005515: protein binding | 2.01E-02 |
| 69 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.14E-02 |
| 70 | GO:0004364: glutathione transferase activity | 2.35E-02 |
| 71 | GO:0004185: serine-type carboxypeptidase activity | 2.42E-02 |
| 72 | GO:0043621: protein self-association | 2.56E-02 |
| 73 | GO:0005215: transporter activity | 2.62E-02 |
| 74 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.70E-02 |
| 75 | GO:0051287: NAD binding | 2.77E-02 |
| 76 | GO:0031625: ubiquitin protein ligase binding | 3.22E-02 |
| 77 | GO:0016491: oxidoreductase activity | 3.26E-02 |
| 78 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.45E-02 |
| 79 | GO:0004650: polygalacturonase activity | 3.61E-02 |
| 80 | GO:0016874: ligase activity | 3.69E-02 |
| 81 | GO:0003729: mRNA binding | 3.79E-02 |
| 82 | GO:0020037: heme binding | 4.07E-02 |
| 83 | GO:0003723: RNA binding | 4.58E-02 |
| 84 | GO:0004252: serine-type endopeptidase activity | 4.86E-02 |
| 85 | GO:0030170: pyridoxal phosphate binding | 4.86E-02 |