GO Enrichment Analysis of Co-expressed Genes with
AT5G58310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 2 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 3 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 5 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 6 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 7 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 8 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 9 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 10 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 11 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 12 | GO:0009733: response to auxin | 2.50E-07 |
| 13 | GO:0009734: auxin-activated signaling pathway | 7.81E-07 |
| 14 | GO:0040008: regulation of growth | 3.97E-06 |
| 15 | GO:0009657: plastid organization | 1.41E-05 |
| 16 | GO:0009658: chloroplast organization | 1.88E-05 |
| 17 | GO:0016556: mRNA modification | 3.81E-05 |
| 18 | GO:2000012: regulation of auxin polar transport | 6.62E-05 |
| 19 | GO:0042793: transcription from plastid promoter | 1.54E-04 |
| 20 | GO:0042547: cell wall modification involved in multidimensional cell growth | 3.27E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 3.27E-04 |
| 22 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.27E-04 |
| 23 | GO:0034080: CENP-A containing nucleosome assembly | 3.27E-04 |
| 24 | GO:1902458: positive regulation of stomatal opening | 3.27E-04 |
| 25 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.27E-04 |
| 26 | GO:0006419: alanyl-tRNA aminoacylation | 3.27E-04 |
| 27 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 3.27E-04 |
| 28 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 3.27E-04 |
| 29 | GO:0000476: maturation of 4.5S rRNA | 3.27E-04 |
| 30 | GO:0000967: rRNA 5'-end processing | 3.27E-04 |
| 31 | GO:0051418: microtubule nucleation by microtubule organizing center | 3.27E-04 |
| 32 | GO:0070509: calcium ion import | 3.27E-04 |
| 33 | GO:0019478: D-amino acid catabolic process | 3.27E-04 |
| 34 | GO:0046620: regulation of organ growth | 3.44E-04 |
| 35 | GO:0006353: DNA-templated transcription, termination | 3.44E-04 |
| 36 | GO:1900865: chloroplast RNA modification | 5.99E-04 |
| 37 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 7.13E-04 |
| 38 | GO:0001682: tRNA 5'-leader removal | 7.13E-04 |
| 39 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.13E-04 |
| 40 | GO:0034470: ncRNA processing | 7.13E-04 |
| 41 | GO:0033566: gamma-tubulin complex localization | 7.13E-04 |
| 42 | GO:1900871: chloroplast mRNA modification | 7.13E-04 |
| 43 | GO:0006415: translational termination | 8.05E-04 |
| 44 | GO:0005977: glycogen metabolic process | 1.16E-03 |
| 45 | GO:0007052: mitotic spindle organization | 1.16E-03 |
| 46 | GO:0045910: negative regulation of DNA recombination | 1.16E-03 |
| 47 | GO:0048281: inflorescence morphogenesis | 1.16E-03 |
| 48 | GO:0006954: inflammatory response | 1.16E-03 |
| 49 | GO:0010623: programmed cell death involved in cell development | 1.16E-03 |
| 50 | GO:0071732: cellular response to nitric oxide | 1.31E-03 |
| 51 | GO:0009790: embryo development | 1.37E-03 |
| 52 | GO:0034508: centromere complex assembly | 1.66E-03 |
| 53 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.66E-03 |
| 54 | GO:0010239: chloroplast mRNA processing | 1.66E-03 |
| 55 | GO:0090307: mitotic spindle assembly | 1.66E-03 |
| 56 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.66E-03 |
| 57 | GO:0010148: transpiration | 1.66E-03 |
| 58 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.66E-03 |
| 59 | GO:0009793: embryo development ending in seed dormancy | 1.75E-03 |
| 60 | GO:0006418: tRNA aminoacylation for protein translation | 1.78E-03 |
| 61 | GO:0009926: auxin polar transport | 1.89E-03 |
| 62 | GO:0006730: one-carbon metabolic process | 2.14E-03 |
| 63 | GO:0010021: amylopectin biosynthetic process | 2.23E-03 |
| 64 | GO:0042274: ribosomal small subunit biogenesis | 2.23E-03 |
| 65 | GO:0022622: root system development | 2.23E-03 |
| 66 | GO:0010508: positive regulation of autophagy | 2.23E-03 |
| 67 | GO:0044205: 'de novo' UMP biosynthetic process | 2.23E-03 |
| 68 | GO:0071369: cellular response to ethylene stimulus | 2.33E-03 |
| 69 | GO:0010236: plastoquinone biosynthetic process | 2.84E-03 |
| 70 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.84E-03 |
| 71 | GO:0009107: lipoate biosynthetic process | 2.84E-03 |
| 72 | GO:0010158: abaxial cell fate specification | 2.84E-03 |
| 73 | GO:0032543: mitochondrial translation | 2.84E-03 |
| 74 | GO:0008033: tRNA processing | 2.96E-03 |
| 75 | GO:0048868: pollen tube development | 3.19E-03 |
| 76 | GO:0050665: hydrogen peroxide biosynthetic process | 3.51E-03 |
| 77 | GO:0006563: L-serine metabolic process | 3.51E-03 |
| 78 | GO:0016554: cytidine to uridine editing | 3.51E-03 |
| 79 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.51E-03 |
| 80 | GO:0032973: amino acid export | 3.51E-03 |
| 81 | GO:0030488: tRNA methylation | 4.23E-03 |
| 82 | GO:0009854: oxidative photosynthetic carbon pathway | 4.23E-03 |
| 83 | GO:0080086: stamen filament development | 4.23E-03 |
| 84 | GO:0009648: photoperiodism | 4.23E-03 |
| 85 | GO:0019509: L-methionine salvage from methylthioadenosine | 4.23E-03 |
| 86 | GO:0042372: phylloquinone biosynthetic process | 4.23E-03 |
| 87 | GO:0034389: lipid particle organization | 4.23E-03 |
| 88 | GO:0017148: negative regulation of translation | 4.23E-03 |
| 89 | GO:1901259: chloroplast rRNA processing | 4.23E-03 |
| 90 | GO:0009942: longitudinal axis specification | 4.23E-03 |
| 91 | GO:0071281: cellular response to iron ion | 4.49E-03 |
| 92 | GO:0010252: auxin homeostasis | 4.77E-03 |
| 93 | GO:0006400: tRNA modification | 4.99E-03 |
| 94 | GO:0030307: positive regulation of cell growth | 4.99E-03 |
| 95 | GO:0010103: stomatal complex morphogenesis | 4.99E-03 |
| 96 | GO:0032880: regulation of protein localization | 4.99E-03 |
| 97 | GO:0048528: post-embryonic root development | 4.99E-03 |
| 98 | GO:0009772: photosynthetic electron transport in photosystem II | 4.99E-03 |
| 99 | GO:0043090: amino acid import | 4.99E-03 |
| 100 | GO:0010050: vegetative phase change | 4.99E-03 |
| 101 | GO:0010196: nonphotochemical quenching | 4.99E-03 |
| 102 | GO:0070370: cellular heat acclimation | 4.99E-03 |
| 103 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 4.99E-03 |
| 104 | GO:0005975: carbohydrate metabolic process | 5.25E-03 |
| 105 | GO:0010027: thylakoid membrane organization | 5.70E-03 |
| 106 | GO:2000070: regulation of response to water deprivation | 5.80E-03 |
| 107 | GO:0031540: regulation of anthocyanin biosynthetic process | 5.80E-03 |
| 108 | GO:0000105: histidine biosynthetic process | 5.80E-03 |
| 109 | GO:0009850: auxin metabolic process | 5.80E-03 |
| 110 | GO:0042255: ribosome assembly | 5.80E-03 |
| 111 | GO:0070413: trehalose metabolism in response to stress | 5.80E-03 |
| 112 | GO:0010204: defense response signaling pathway, resistance gene-independent | 6.65E-03 |
| 113 | GO:0032544: plastid translation | 6.65E-03 |
| 114 | GO:0007389: pattern specification process | 6.65E-03 |
| 115 | GO:0001558: regulation of cell growth | 6.65E-03 |
| 116 | GO:0000373: Group II intron splicing | 7.54E-03 |
| 117 | GO:0000902: cell morphogenesis | 7.54E-03 |
| 118 | GO:0015780: nucleotide-sugar transport | 7.54E-03 |
| 119 | GO:0006098: pentose-phosphate shunt | 7.54E-03 |
| 120 | GO:0019432: triglyceride biosynthetic process | 7.54E-03 |
| 121 | GO:0080144: amino acid homeostasis | 7.54E-03 |
| 122 | GO:0031425: chloroplast RNA processing | 8.48E-03 |
| 123 | GO:0007275: multicellular organism development | 9.16E-03 |
| 124 | GO:0006298: mismatch repair | 9.45E-03 |
| 125 | GO:0006949: syncytium formation | 9.45E-03 |
| 126 | GO:0006259: DNA metabolic process | 9.45E-03 |
| 127 | GO:0006535: cysteine biosynthetic process from serine | 9.45E-03 |
| 128 | GO:0006265: DNA topological change | 1.05E-02 |
| 129 | GO:0009073: aromatic amino acid family biosynthetic process | 1.05E-02 |
| 130 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.15E-02 |
| 131 | GO:0045037: protein import into chloroplast stroma | 1.15E-02 |
| 132 | GO:0010582: floral meristem determinacy | 1.15E-02 |
| 133 | GO:0010229: inflorescence development | 1.26E-02 |
| 134 | GO:0006094: gluconeogenesis | 1.26E-02 |
| 135 | GO:0048467: gynoecium development | 1.37E-02 |
| 136 | GO:0009965: leaf morphogenesis | 1.37E-02 |
| 137 | GO:0090351: seedling development | 1.49E-02 |
| 138 | GO:0070588: calcium ion transmembrane transport | 1.49E-02 |
| 139 | GO:0009664: plant-type cell wall organization | 1.54E-02 |
| 140 | GO:0042254: ribosome biogenesis | 1.56E-02 |
| 141 | GO:0042023: DNA endoreduplication | 1.61E-02 |
| 142 | GO:0006071: glycerol metabolic process | 1.61E-02 |
| 143 | GO:0000162: tryptophan biosynthetic process | 1.61E-02 |
| 144 | GO:0006364: rRNA processing | 1.65E-02 |
| 145 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.71E-02 |
| 146 | GO:0005992: trehalose biosynthetic process | 1.73E-02 |
| 147 | GO:0019344: cysteine biosynthetic process | 1.73E-02 |
| 148 | GO:0009116: nucleoside metabolic process | 1.73E-02 |
| 149 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.73E-02 |
| 150 | GO:0030150: protein import into mitochondrial matrix | 1.73E-02 |
| 151 | GO:0051302: regulation of cell division | 1.86E-02 |
| 152 | GO:0016575: histone deacetylation | 1.86E-02 |
| 153 | GO:0016998: cell wall macromolecule catabolic process | 1.99E-02 |
| 154 | GO:0071555: cell wall organization | 2.01E-02 |
| 155 | GO:0031348: negative regulation of defense response | 2.12E-02 |
| 156 | GO:0009814: defense response, incompatible interaction | 2.12E-02 |
| 157 | GO:0016226: iron-sulfur cluster assembly | 2.12E-02 |
| 158 | GO:0001944: vasculature development | 2.25E-02 |
| 159 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.25E-02 |
| 160 | GO:0009306: protein secretion | 2.39E-02 |
| 161 | GO:0010089: xylem development | 2.39E-02 |
| 162 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.53E-02 |
| 163 | GO:0008284: positive regulation of cell proliferation | 2.53E-02 |
| 164 | GO:0000226: microtubule cytoskeleton organization | 2.68E-02 |
| 165 | GO:0006662: glycerol ether metabolic process | 2.82E-02 |
| 166 | GO:0009741: response to brassinosteroid | 2.82E-02 |
| 167 | GO:0009958: positive gravitropism | 2.82E-02 |
| 168 | GO:0007059: chromosome segregation | 2.97E-02 |
| 169 | GO:0048544: recognition of pollen | 2.97E-02 |
| 170 | GO:0019252: starch biosynthetic process | 3.12E-02 |
| 171 | GO:0008654: phospholipid biosynthetic process | 3.12E-02 |
| 172 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.28E-02 |
| 173 | GO:0002229: defense response to oomycetes | 3.28E-02 |
| 174 | GO:0000302: response to reactive oxygen species | 3.28E-02 |
| 175 | GO:0032502: developmental process | 3.44E-02 |
| 176 | GO:0009630: gravitropism | 3.44E-02 |
| 177 | GO:0010583: response to cyclopentenone | 3.44E-02 |
| 178 | GO:0009828: plant-type cell wall loosening | 3.76E-02 |
| 179 | GO:0006464: cellular protein modification process | 3.76E-02 |
| 180 | GO:0006413: translational initiation | 3.78E-02 |
| 181 | GO:0009451: RNA modification | 4.15E-02 |
| 182 | GO:0009911: positive regulation of flower development | 4.26E-02 |
| 183 | GO:0001666: response to hypoxia | 4.26E-02 |
| 184 | GO:0009739: response to gibberellin | 4.53E-02 |
| 185 | GO:0010411: xyloglucan metabolic process | 4.78E-02 |
| 186 | GO:0008380: RNA splicing | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0015267: channel activity | 0.00E+00 |
| 3 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 4 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 5 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 6 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 8 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 9 | GO:0030378: serine racemase activity | 0.00E+00 |
| 10 | GO:0003941: L-serine ammonia-lyase activity | 0.00E+00 |
| 11 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 12 | GO:0008721: D-serine ammonia-lyase activity | 0.00E+00 |
| 13 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 14 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 4.84E-06 |
| 15 | GO:0016149: translation release factor activity, codon specific | 3.81E-05 |
| 16 | GO:0004176: ATP-dependent peptidase activity | 1.75E-04 |
| 17 | GO:0004830: tryptophan-tRNA ligase activity | 3.27E-04 |
| 18 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 3.27E-04 |
| 19 | GO:0004813: alanine-tRNA ligase activity | 3.27E-04 |
| 20 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.27E-04 |
| 21 | GO:0003747: translation release factor activity | 5.07E-04 |
| 22 | GO:0004519: endonuclease activity | 6.29E-04 |
| 23 | GO:0017118: lipoyltransferase activity | 7.13E-04 |
| 24 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.13E-04 |
| 25 | GO:0016415: octanoyltransferase activity | 7.13E-04 |
| 26 | GO:0004047: aminomethyltransferase activity | 7.13E-04 |
| 27 | GO:0019156: isoamylase activity | 7.13E-04 |
| 28 | GO:0019843: rRNA binding | 1.08E-03 |
| 29 | GO:0052692: raffinose alpha-galactosidase activity | 1.16E-03 |
| 30 | GO:0002161: aminoacyl-tRNA editing activity | 1.16E-03 |
| 31 | GO:0004557: alpha-galactosidase activity | 1.16E-03 |
| 32 | GO:0043023: ribosomal large subunit binding | 1.66E-03 |
| 33 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.66E-03 |
| 34 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.66E-03 |
| 35 | GO:0048487: beta-tubulin binding | 1.66E-03 |
| 36 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.66E-03 |
| 37 | GO:0042277: peptide binding | 2.23E-03 |
| 38 | GO:0008891: glycolate oxidase activity | 2.23E-03 |
| 39 | GO:0004659: prenyltransferase activity | 2.23E-03 |
| 40 | GO:0004045: aminoacyl-tRNA hydrolase activity | 2.23E-03 |
| 41 | GO:0043015: gamma-tubulin binding | 2.23E-03 |
| 42 | GO:0019199: transmembrane receptor protein kinase activity | 2.23E-03 |
| 43 | GO:0004812: aminoacyl-tRNA ligase activity | 2.74E-03 |
| 44 | GO:0030983: mismatched DNA binding | 3.51E-03 |
| 45 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.51E-03 |
| 46 | GO:0004332: fructose-bisphosphate aldolase activity | 3.51E-03 |
| 47 | GO:0004526: ribonuclease P activity | 3.51E-03 |
| 48 | GO:0004556: alpha-amylase activity | 3.51E-03 |
| 49 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.23E-03 |
| 50 | GO:0004124: cysteine synthase activity | 4.23E-03 |
| 51 | GO:0008195: phosphatidate phosphatase activity | 4.23E-03 |
| 52 | GO:0004144: diacylglycerol O-acyltransferase activity | 4.23E-03 |
| 53 | GO:0003684: damaged DNA binding | 4.77E-03 |
| 54 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 4.99E-03 |
| 55 | GO:0008237: metallopeptidase activity | 5.07E-03 |
| 56 | GO:0043022: ribosome binding | 5.80E-03 |
| 57 | GO:0016829: lyase activity | 6.39E-03 |
| 58 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 6.65E-03 |
| 59 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 6.65E-03 |
| 60 | GO:0003723: RNA binding | 7.60E-03 |
| 61 | GO:0009672: auxin:proton symporter activity | 8.48E-03 |
| 62 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 8.61E-03 |
| 63 | GO:0004805: trehalose-phosphatase activity | 9.45E-03 |
| 64 | GO:0000049: tRNA binding | 1.15E-02 |
| 65 | GO:0004185: serine-type carboxypeptidase activity | 1.22E-02 |
| 66 | GO:0005262: calcium channel activity | 1.26E-02 |
| 67 | GO:0004565: beta-galactosidase activity | 1.26E-02 |
| 68 | GO:0010329: auxin efflux transmembrane transporter activity | 1.26E-02 |
| 69 | GO:0015266: protein channel activity | 1.26E-02 |
| 70 | GO:0043621: protein self-association | 1.32E-02 |
| 71 | GO:0008083: growth factor activity | 1.37E-02 |
| 72 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.37E-02 |
| 73 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.61E-02 |
| 74 | GO:0003887: DNA-directed DNA polymerase activity | 1.61E-02 |
| 75 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.61E-02 |
| 76 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.61E-02 |
| 77 | GO:0003690: double-stranded DNA binding | 1.71E-02 |
| 78 | GO:0051536: iron-sulfur cluster binding | 1.73E-02 |
| 79 | GO:0031418: L-ascorbic acid binding | 1.73E-02 |
| 80 | GO:0004407: histone deacetylase activity | 1.73E-02 |
| 81 | GO:0004650: polygalacturonase activity | 2.15E-02 |
| 82 | GO:0022857: transmembrane transporter activity | 2.21E-02 |
| 83 | GO:0030570: pectate lyase activity | 2.25E-02 |
| 84 | GO:0003727: single-stranded RNA binding | 2.39E-02 |
| 85 | GO:0047134: protein-disulfide reductase activity | 2.53E-02 |
| 86 | GO:0008536: Ran GTPase binding | 2.82E-02 |
| 87 | GO:0004791: thioredoxin-disulfide reductase activity | 2.97E-02 |
| 88 | GO:0016853: isomerase activity | 2.97E-02 |
| 89 | GO:0010181: FMN binding | 2.97E-02 |
| 90 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.28E-02 |
| 91 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.60E-02 |
| 92 | GO:0000156: phosphorelay response regulator activity | 3.60E-02 |
| 93 | GO:0016791: phosphatase activity | 3.76E-02 |
| 94 | GO:0016597: amino acid binding | 4.09E-02 |
| 95 | GO:0005525: GTP binding | 4.24E-02 |
| 96 | GO:0003743: translation initiation factor activity | 4.72E-02 |
| 97 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.78E-02 |