Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G58300

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010067: procambium histogenesis2.09E-06
2GO:0042759: long-chain fatty acid biosynthetic process1.87E-05
3GO:0034971: histone H3-R17 methylation1.87E-05
4GO:0048016: inositol phosphate-mediated signaling1.87E-05
5GO:0034970: histone H3-R2 methylation1.87E-05
6GO:0034972: histone H3-R26 methylation1.87E-05
7GO:0009786: regulation of asymmetric cell division4.85E-05
8GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine4.85E-05
9GO:0031048: chromatin silencing by small RNA1.30E-04
10GO:0009558: embryo sac cellularization1.30E-04
11GO:0051513: regulation of monopolar cell growth1.30E-04
12GO:0019048: modulation by virus of host morphology or physiology1.30E-04
13GO:0051567: histone H3-K9 methylation1.78E-04
14GO:0006351: transcription, DNA-templated1.84E-04
15GO:0032957: inositol trisphosphate metabolic process2.30E-04
16GO:0046855: inositol phosphate dephosphorylation2.85E-04
17GO:0016458: gene silencing2.85E-04
18GO:0045962: positive regulation of development, heterochronic2.85E-04
19GO:0010103: stomatal complex morphogenesis4.02E-04
20GO:0009909: regulation of flower development4.27E-04
21GO:0048574: long-day photoperiodism, flowering5.27E-04
22GO:0006355: regulation of transcription, DNA-templated5.83E-04
23GO:0030422: production of siRNA involved in RNA interference7.30E-04
24GO:0048829: root cap development7.30E-04
25GO:0008285: negative regulation of cell proliferation8.02E-04
26GO:0048229: gametophyte development8.02E-04
27GO:0046856: phosphatidylinositol dephosphorylation8.02E-04
28GO:0010588: cotyledon vascular tissue pattern formation9.49E-04
29GO:0010223: secondary shoot formation1.02E-03
30GO:0010025: wax biosynthetic process1.18E-03
31GO:0030154: cell differentiation1.40E-03
32GO:0006306: DNA methylation1.44E-03
33GO:0001944: vasculature development1.61E-03
34GO:0048366: leaf development1.63E-03
35GO:0010089: xylem development1.70E-03
36GO:0010051: xylem and phloem pattern formation1.89E-03
37GO:0010305: leaf vascular tissue pattern formation1.99E-03
38GO:0006342: chromatin silencing1.99E-03
39GO:0007018: microtubule-based movement2.09E-03
40GO:0010583: response to cyclopentenone2.40E-03
41GO:0016042: lipid catabolic process2.43E-03
42GO:0048364: root development2.61E-03
43GO:0009567: double fertilization forming a zygote and endosperm2.61E-03
44GO:0071805: potassium ion transmembrane transport2.72E-03
45GO:0051607: defense response to virus2.82E-03
46GO:0000910: cytokinesis2.82E-03
47GO:0009816: defense response to bacterium, incompatible interaction3.05E-03
48GO:0010411: xyloglucan metabolic process3.28E-03
49GO:0048481: plant ovule development3.51E-03
50GO:0010311: lateral root formation3.63E-03
51GO:0000160: phosphorelay signal transduction system3.63E-03
52GO:0009416: response to light stimulus4.40E-03
53GO:0051707: response to other organism4.91E-03
54GO:0042546: cell wall biogenesis5.04E-03
55GO:0009965: leaf morphogenesis5.32E-03
56GO:0006813: potassium ion transport6.02E-03
57GO:0009736: cytokinin-activated signaling pathway6.02E-03
58GO:0051603: proteolysis involved in cellular protein catabolic process6.17E-03
59GO:0006417: regulation of translation6.46E-03
60GO:0048316: seed development6.91E-03
61GO:0009553: embryo sac development7.53E-03
62GO:0009058: biosynthetic process9.33E-03
63GO:0042744: hydrogen peroxide catabolic process9.85E-03
64GO:0009790: embryo development1.00E-02
65GO:0040008: regulation of growth1.09E-02
66GO:0010228: vegetative to reproductive phase transition of meristem1.16E-02
67GO:0006468: protein phosphorylation1.67E-02
68GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.83E-02
69GO:0044550: secondary metabolite biosynthetic process1.90E-02
70GO:0009793: embryo development ending in seed dormancy2.07E-02
71GO:0016567: protein ubiquitination2.72E-02
72GO:0009734: auxin-activated signaling pathway3.01E-02
73GO:0009735: response to cytokinin3.33E-02
74GO:0009738: abscisic acid-activated signaling pathway3.47E-02
75GO:0009555: pollen development3.55E-02
76GO:0051301: cell division3.78E-02
RankGO TermAdjusted P value
1GO:0047661: amino-acid racemase activity0.00E+00
2GO:0046030: inositol trisphosphate phosphatase activity1.87E-05
3GO:0035241: protein-arginine omega-N monomethyltransferase activity4.85E-05
4GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity4.85E-05
5GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity4.85E-05
6GO:0032549: ribonucleoside binding8.61E-05
7GO:0008469: histone-arginine N-methyltransferase activity8.61E-05
8GO:0035197: siRNA binding1.30E-04
9GO:0019199: transmembrane receptor protein kinase activity1.78E-04
10GO:0042803: protein homodimerization activity2.02E-04
11GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity2.85E-04
12GO:0001054: RNA polymerase I activity8.02E-04
13GO:0004521: endoribonuclease activity8.75E-04
14GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity8.75E-04
15GO:0015079: potassium ion transmembrane transporter activity1.35E-03
16GO:0016788: hydrolase activity, acting on ester bonds1.41E-03
17GO:0003682: chromatin binding1.47E-03
18GO:0004674: protein serine/threonine kinase activity1.88E-03
19GO:0052689: carboxylic ester hydrolase activity1.89E-03
20GO:0001085: RNA polymerase II transcription factor binding1.99E-03
21GO:0004871: signal transducer activity2.13E-03
22GO:0016762: xyloglucan:xyloglucosyl transferase activity2.29E-03
23GO:0000156: phosphorelay response regulator activity2.50E-03
24GO:0016798: hydrolase activity, acting on glycosyl bonds3.28E-03
25GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.88E-03
26GO:0004185: serine-type carboxypeptidase activity4.91E-03
27GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.02E-03
28GO:0016298: lipase activity6.17E-03
29GO:0003777: microtubule motor activity6.46E-03
30GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups6.91E-03
31GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding9.85E-03
32GO:0005515: protein binding1.09E-02
33GO:0008017: microtubule binding1.16E-02
34GO:0004672: protein kinase activity1.31E-02
35GO:0020037: heme binding1.41E-02
36GO:0008168: methyltransferase activity1.50E-02
37GO:0046982: protein heterodimerization activity1.52E-02
38GO:0004601: peroxidase activity1.54E-02
39GO:0005524: ATP binding1.74E-02
40GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.15E-02
41GO:0003700: transcription factor activity, sequence-specific DNA binding2.37E-02
42GO:0009055: electron carrier activity2.48E-02
43GO:0003677: DNA binding3.08E-02
44GO:0016887: ATPase activity3.23E-02
45GO:0016740: transferase activity4.09E-02
46GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.33E-02
47GO:0030246: carbohydrate binding4.39E-02
48GO:0005507: copper ion binding4.57E-02
49GO:0019825: oxygen binding4.57E-02
50GO:0005516: calmodulin binding4.75E-02
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Gene type



Gene DE type