GO Enrichment Analysis of Co-expressed Genes with
AT5G57780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 2 | GO:0015843: methylammonium transport | 0.00E+00 |
| 3 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 4 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 5 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 6 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 7 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 8 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 9 | GO:0009606: tropism | 0.00E+00 |
| 10 | GO:0046620: regulation of organ growth | 2.57E-07 |
| 11 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.66E-05 |
| 12 | GO:0009733: response to auxin | 5.54E-05 |
| 13 | GO:0051513: regulation of monopolar cell growth | 5.86E-05 |
| 14 | GO:0009926: auxin polar transport | 6.16E-05 |
| 15 | GO:2000038: regulation of stomatal complex development | 1.03E-04 |
| 16 | GO:0040008: regulation of growth | 1.08E-04 |
| 17 | GO:0009734: auxin-activated signaling pathway | 1.49E-04 |
| 18 | GO:0032876: negative regulation of DNA endoreduplication | 1.59E-04 |
| 19 | GO:0006468: protein phosphorylation | 1.64E-04 |
| 20 | GO:0010480: microsporocyte differentiation | 4.18E-04 |
| 21 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.18E-04 |
| 22 | GO:0000066: mitochondrial ornithine transport | 4.18E-04 |
| 23 | GO:0070509: calcium ion import | 4.18E-04 |
| 24 | GO:0007389: pattern specification process | 6.03E-04 |
| 25 | GO:0000373: Group II intron splicing | 7.22E-04 |
| 26 | GO:0009638: phototropism | 8.52E-04 |
| 27 | GO:0009786: regulation of asymmetric cell division | 9.05E-04 |
| 28 | GO:0006529: asparagine biosynthetic process | 9.05E-04 |
| 29 | GO:2000123: positive regulation of stomatal complex development | 9.05E-04 |
| 30 | GO:0070981: L-asparagine biosynthetic process | 9.05E-04 |
| 31 | GO:0010252: auxin homeostasis | 9.25E-04 |
| 32 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.14E-03 |
| 33 | GO:0010623: programmed cell death involved in cell development | 1.47E-03 |
| 34 | GO:0051604: protein maturation | 1.47E-03 |
| 35 | GO:0016050: vesicle organization | 1.47E-03 |
| 36 | GO:0045910: negative regulation of DNA recombination | 1.47E-03 |
| 37 | GO:0009742: brassinosteroid mediated signaling pathway | 1.47E-03 |
| 38 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 1.47E-03 |
| 39 | GO:0071705: nitrogen compound transport | 1.47E-03 |
| 40 | GO:0009767: photosynthetic electron transport chain | 1.48E-03 |
| 41 | GO:0000160: phosphorelay signal transduction system | 1.72E-03 |
| 42 | GO:0090351: seedling development | 1.87E-03 |
| 43 | GO:0070588: calcium ion transmembrane transport | 1.87E-03 |
| 44 | GO:0009067: aspartate family amino acid biosynthetic process | 2.13E-03 |
| 45 | GO:0007231: osmosensory signaling pathway | 2.13E-03 |
| 46 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 2.13E-03 |
| 47 | GO:0051639: actin filament network formation | 2.13E-03 |
| 48 | GO:0044211: CTP salvage | 2.13E-03 |
| 49 | GO:0019048: modulation by virus of host morphology or physiology | 2.13E-03 |
| 50 | GO:0031048: chromatin silencing by small RNA | 2.13E-03 |
| 51 | GO:0015696: ammonium transport | 2.13E-03 |
| 52 | GO:0046739: transport of virus in multicellular host | 2.13E-03 |
| 53 | GO:2000904: regulation of starch metabolic process | 2.13E-03 |
| 54 | GO:0005992: trehalose biosynthetic process | 2.31E-03 |
| 55 | GO:0051764: actin crosslink formation | 2.86E-03 |
| 56 | GO:0071249: cellular response to nitrate | 2.86E-03 |
| 57 | GO:0072488: ammonium transmembrane transport | 2.86E-03 |
| 58 | GO:0022622: root system development | 2.86E-03 |
| 59 | GO:0033500: carbohydrate homeostasis | 2.86E-03 |
| 60 | GO:0051567: histone H3-K9 methylation | 2.86E-03 |
| 61 | GO:0010508: positive regulation of autophagy | 2.86E-03 |
| 62 | GO:0044206: UMP salvage | 2.86E-03 |
| 63 | GO:0010082: regulation of root meristem growth | 3.35E-03 |
| 64 | GO:0010089: xylem development | 3.64E-03 |
| 65 | GO:1902183: regulation of shoot apical meristem development | 3.66E-03 |
| 66 | GO:0016123: xanthophyll biosynthetic process | 3.66E-03 |
| 67 | GO:0010158: abaxial cell fate specification | 3.66E-03 |
| 68 | GO:0030308: negative regulation of cell growth | 3.66E-03 |
| 69 | GO:0010375: stomatal complex patterning | 3.66E-03 |
| 70 | GO:0006544: glycine metabolic process | 3.66E-03 |
| 71 | GO:0009736: cytokinin-activated signaling pathway | 4.42E-03 |
| 72 | GO:0016458: gene silencing | 4.52E-03 |
| 73 | GO:0006563: L-serine metabolic process | 4.52E-03 |
| 74 | GO:0010405: arabinogalactan protein metabolic process | 4.52E-03 |
| 75 | GO:0010315: auxin efflux | 4.52E-03 |
| 76 | GO:0006655: phosphatidylglycerol biosynthetic process | 4.52E-03 |
| 77 | GO:0006206: pyrimidine nucleobase metabolic process | 4.52E-03 |
| 78 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.52E-03 |
| 79 | GO:0009958: positive gravitropism | 4.60E-03 |
| 80 | GO:0030488: tRNA methylation | 5.46E-03 |
| 81 | GO:0009088: threonine biosynthetic process | 5.46E-03 |
| 82 | GO:2000037: regulation of stomatal complex patterning | 5.46E-03 |
| 83 | GO:0010067: procambium histogenesis | 5.46E-03 |
| 84 | GO:0032502: developmental process | 6.08E-03 |
| 85 | GO:0032880: regulation of protein localization | 6.45E-03 |
| 86 | GO:0009610: response to symbiotic fungus | 6.45E-03 |
| 87 | GO:0048528: post-embryonic root development | 6.45E-03 |
| 88 | GO:0010050: vegetative phase change | 6.45E-03 |
| 89 | GO:0048437: floral organ development | 6.45E-03 |
| 90 | GO:0032875: regulation of DNA endoreduplication | 7.50E-03 |
| 91 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 7.50E-03 |
| 92 | GO:0048766: root hair initiation | 7.50E-03 |
| 93 | GO:0009850: auxin metabolic process | 7.50E-03 |
| 94 | GO:0051607: defense response to virus | 7.78E-03 |
| 95 | GO:0080167: response to karrikin | 8.37E-03 |
| 96 | GO:0009827: plant-type cell wall modification | 8.61E-03 |
| 97 | GO:0010497: plasmodesmata-mediated intercellular transport | 8.61E-03 |
| 98 | GO:0010411: xyloglucan metabolic process | 9.73E-03 |
| 99 | GO:0000902: cell morphogenesis | 9.78E-03 |
| 100 | GO:0009051: pentose-phosphate shunt, oxidative branch | 9.78E-03 |
| 101 | GO:2000024: regulation of leaf development | 9.78E-03 |
| 102 | GO:0009058: biosynthetic process | 9.90E-03 |
| 103 | GO:0035999: tetrahydrofolate interconversion | 1.10E-02 |
| 104 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.10E-02 |
| 105 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.10E-02 |
| 106 | GO:0031425: chloroplast RNA processing | 1.10E-02 |
| 107 | GO:0009416: response to light stimulus | 1.13E-02 |
| 108 | GO:0030422: production of siRNA involved in RNA interference | 1.23E-02 |
| 109 | GO:0048829: root cap development | 1.23E-02 |
| 110 | GO:0009641: shade avoidance | 1.23E-02 |
| 111 | GO:0006298: mismatch repair | 1.23E-02 |
| 112 | GO:0009299: mRNA transcription | 1.23E-02 |
| 113 | GO:0006535: cysteine biosynthetic process from serine | 1.23E-02 |
| 114 | GO:0016310: phosphorylation | 1.32E-02 |
| 115 | GO:0048229: gametophyte development | 1.36E-02 |
| 116 | GO:0010015: root morphogenesis | 1.36E-02 |
| 117 | GO:0006816: calcium ion transport | 1.36E-02 |
| 118 | GO:0009773: photosynthetic electron transport in photosystem I | 1.36E-02 |
| 119 | GO:0007623: circadian rhythm | 1.40E-02 |
| 120 | GO:0008361: regulation of cell size | 1.50E-02 |
| 121 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.50E-02 |
| 122 | GO:0015706: nitrate transport | 1.50E-02 |
| 123 | GO:0010582: floral meristem determinacy | 1.50E-02 |
| 124 | GO:0048364: root development | 1.61E-02 |
| 125 | GO:0030154: cell differentiation | 1.62E-02 |
| 126 | GO:0006897: endocytosis | 1.63E-02 |
| 127 | GO:0006006: glucose metabolic process | 1.64E-02 |
| 128 | GO:0010075: regulation of meristem growth | 1.64E-02 |
| 129 | GO:0009725: response to hormone | 1.64E-02 |
| 130 | GO:2000012: regulation of auxin polar transport | 1.64E-02 |
| 131 | GO:0009785: blue light signaling pathway | 1.64E-02 |
| 132 | GO:0010628: positive regulation of gene expression | 1.64E-02 |
| 133 | GO:0007166: cell surface receptor signaling pathway | 1.65E-02 |
| 134 | GO:0010223: secondary shoot formation | 1.79E-02 |
| 135 | GO:0009934: regulation of meristem structural organization | 1.79E-02 |
| 136 | GO:0006541: glutamine metabolic process | 1.79E-02 |
| 137 | GO:0010207: photosystem II assembly | 1.79E-02 |
| 138 | GO:0042546: cell wall biogenesis | 1.84E-02 |
| 139 | GO:0010167: response to nitrate | 1.94E-02 |
| 140 | GO:0006071: glycerol metabolic process | 2.09E-02 |
| 141 | GO:0000162: tryptophan biosynthetic process | 2.09E-02 |
| 142 | GO:0051017: actin filament bundle assembly | 2.25E-02 |
| 143 | GO:0019344: cysteine biosynthetic process | 2.25E-02 |
| 144 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.25E-02 |
| 145 | GO:0007165: signal transduction | 2.26E-02 |
| 146 | GO:0006825: copper ion transport | 2.42E-02 |
| 147 | GO:0006418: tRNA aminoacylation for protein translation | 2.42E-02 |
| 148 | GO:0006334: nucleosome assembly | 2.59E-02 |
| 149 | GO:0006306: DNA methylation | 2.59E-02 |
| 150 | GO:0031348: negative regulation of defense response | 2.76E-02 |
| 151 | GO:0006730: one-carbon metabolic process | 2.76E-02 |
| 152 | GO:0009723: response to ethylene | 2.91E-02 |
| 153 | GO:0048316: seed development | 2.92E-02 |
| 154 | GO:0001944: vasculature development | 2.94E-02 |
| 155 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.94E-02 |
| 156 | GO:0009735: response to cytokinin | 3.10E-02 |
| 157 | GO:0006284: base-excision repair | 3.11E-02 |
| 158 | GO:0009740: gibberellic acid mediated signaling pathway | 3.21E-02 |
| 159 | GO:0008284: positive regulation of cell proliferation | 3.30E-02 |
| 160 | GO:0010087: phloem or xylem histogenesis | 3.49E-02 |
| 161 | GO:0048653: anther development | 3.49E-02 |
| 162 | GO:0042631: cellular response to water deprivation | 3.49E-02 |
| 163 | GO:0006342: chromatin silencing | 3.68E-02 |
| 164 | GO:0009741: response to brassinosteroid | 3.68E-02 |
| 165 | GO:0071555: cell wall organization | 3.75E-02 |
| 166 | GO:0048544: recognition of pollen | 3.87E-02 |
| 167 | GO:0009646: response to absence of light | 3.87E-02 |
| 168 | GO:0008654: phospholipid biosynthetic process | 4.07E-02 |
| 169 | GO:0009851: auxin biosynthetic process | 4.07E-02 |
| 170 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.27E-02 |
| 171 | GO:0071554: cell wall organization or biogenesis | 4.27E-02 |
| 172 | GO:0009630: gravitropism | 4.48E-02 |
| 173 | GO:0071281: cellular response to iron ion | 4.68E-02 |
| 174 | GO:0010090: trichome morphogenesis | 4.68E-02 |
| 175 | GO:0016567: protein ubiquitination | 4.83E-02 |
| 176 | GO:0032259: methylation | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 2 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 3 | GO:0004674: protein serine/threonine kinase activity | 5.40E-05 |
| 4 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 4.18E-04 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 4.18E-04 |
| 6 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 4.18E-04 |
| 7 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 4.18E-04 |
| 8 | GO:0005290: L-histidine transmembrane transporter activity | 4.18E-04 |
| 9 | GO:0004008: copper-exporting ATPase activity | 4.18E-04 |
| 10 | GO:0004071: aspartate-ammonia ligase activity | 4.18E-04 |
| 11 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 4.18E-04 |
| 12 | GO:0016301: kinase activity | 4.40E-04 |
| 13 | GO:0004672: protein kinase activity | 4.92E-04 |
| 14 | GO:0009672: auxin:proton symporter activity | 8.52E-04 |
| 15 | GO:0000156: phosphorelay response regulator activity | 8.57E-04 |
| 16 | GO:0050017: L-3-cyanoalanine synthase activity | 9.05E-04 |
| 17 | GO:0043425: bHLH transcription factor binding | 9.05E-04 |
| 18 | GO:0000064: L-ornithine transmembrane transporter activity | 9.05E-04 |
| 19 | GO:0015929: hexosaminidase activity | 9.05E-04 |
| 20 | GO:0004563: beta-N-acetylhexosaminidase activity | 9.05E-04 |
| 21 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 9.05E-04 |
| 22 | GO:0004805: trehalose-phosphatase activity | 9.91E-04 |
| 23 | GO:0070180: large ribosomal subunit rRNA binding | 1.47E-03 |
| 24 | GO:0070330: aromatase activity | 1.47E-03 |
| 25 | GO:0017150: tRNA dihydrouridine synthase activity | 1.47E-03 |
| 26 | GO:0005262: calcium channel activity | 1.48E-03 |
| 27 | GO:0010329: auxin efflux transmembrane transporter activity | 1.48E-03 |
| 28 | GO:0001872: (1->3)-beta-D-glucan binding | 2.13E-03 |
| 29 | GO:0015189: L-lysine transmembrane transporter activity | 2.13E-03 |
| 30 | GO:0004072: aspartate kinase activity | 2.13E-03 |
| 31 | GO:0015181: arginine transmembrane transporter activity | 2.13E-03 |
| 32 | GO:0035197: siRNA binding | 2.13E-03 |
| 33 | GO:0017172: cysteine dioxygenase activity | 2.13E-03 |
| 34 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.86E-03 |
| 35 | GO:0004834: tryptophan synthase activity | 2.86E-03 |
| 36 | GO:0004845: uracil phosphoribosyltransferase activity | 2.86E-03 |
| 37 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.86E-03 |
| 38 | GO:0019199: transmembrane receptor protein kinase activity | 2.86E-03 |
| 39 | GO:0004871: signal transducer activity | 3.13E-03 |
| 40 | GO:0008725: DNA-3-methyladenine glycosylase activity | 3.66E-03 |
| 41 | GO:0004372: glycine hydroxymethyltransferase activity | 3.66E-03 |
| 42 | GO:0018685: alkane 1-monooxygenase activity | 3.66E-03 |
| 43 | GO:0008519: ammonium transmembrane transporter activity | 4.52E-03 |
| 44 | GO:0030983: mismatched DNA binding | 4.52E-03 |
| 45 | GO:0004605: phosphatidate cytidylyltransferase activity | 4.52E-03 |
| 46 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.52E-03 |
| 47 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.46E-03 |
| 48 | GO:0004124: cysteine synthase activity | 5.46E-03 |
| 49 | GO:0008195: phosphatidate phosphatase activity | 5.46E-03 |
| 50 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.46E-03 |
| 51 | GO:0004849: uridine kinase activity | 5.46E-03 |
| 52 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.69E-03 |
| 53 | GO:0004650: polygalacturonase activity | 6.18E-03 |
| 54 | GO:0030246: carbohydrate binding | 6.19E-03 |
| 55 | GO:0019899: enzyme binding | 6.45E-03 |
| 56 | GO:0008483: transaminase activity | 7.34E-03 |
| 57 | GO:0005375: copper ion transmembrane transporter activity | 8.61E-03 |
| 58 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.73E-03 |
| 59 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 9.78E-03 |
| 60 | GO:0016829: lyase activity | 1.02E-02 |
| 61 | GO:0005524: ATP binding | 1.04E-02 |
| 62 | GO:0004252: serine-type endopeptidase activity | 1.06E-02 |
| 63 | GO:0030170: pyridoxal phosphate binding | 1.06E-02 |
| 64 | GO:0004713: protein tyrosine kinase activity | 1.23E-02 |
| 65 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.28E-02 |
| 66 | GO:0008327: methyl-CpG binding | 1.36E-02 |
| 67 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.36E-02 |
| 68 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.50E-02 |
| 69 | GO:0004521: endoribonuclease activity | 1.50E-02 |
| 70 | GO:0004089: carbonate dehydratase activity | 1.64E-02 |
| 71 | GO:0031072: heat shock protein binding | 1.64E-02 |
| 72 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.64E-02 |
| 73 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.64E-02 |
| 74 | GO:0008083: growth factor activity | 1.79E-02 |
| 75 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.83E-02 |
| 76 | GO:0043621: protein self-association | 1.92E-02 |
| 77 | GO:0031418: L-ascorbic acid binding | 2.25E-02 |
| 78 | GO:0008168: methyltransferase activity | 2.31E-02 |
| 79 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.42E-02 |
| 80 | GO:0035251: UDP-glucosyltransferase activity | 2.59E-02 |
| 81 | GO:0004176: ATP-dependent peptidase activity | 2.59E-02 |
| 82 | GO:0033612: receptor serine/threonine kinase binding | 2.59E-02 |
| 83 | GO:0003727: single-stranded RNA binding | 3.11E-02 |
| 84 | GO:0008514: organic anion transmembrane transporter activity | 3.11E-02 |
| 85 | GO:0004812: aminoacyl-tRNA ligase activity | 3.30E-02 |
| 86 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 3.96E-02 |
| 87 | GO:0019901: protein kinase binding | 4.07E-02 |
| 88 | GO:0042803: protein homodimerization activity | 4.19E-02 |
| 89 | GO:0005215: transporter activity | 4.41E-02 |
| 90 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 4.52E-02 |
| 91 | GO:0051015: actin filament binding | 4.68E-02 |
| 92 | GO:0016759: cellulose synthase activity | 4.89E-02 |
| 93 | GO:0003684: damaged DNA binding | 4.89E-02 |
| 94 | GO:0003735: structural constituent of ribosome | 4.92E-02 |