Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G57580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
3GO:0010401: pectic galactan metabolic process0.00E+00
4GO:0006497: protein lipidation0.00E+00
5GO:0072722: response to amitrole0.00E+00
6GO:0015031: protein transport2.19E-05
7GO:0006914: autophagy8.67E-05
8GO:0016337: single organismal cell-cell adhesion1.22E-04
9GO:0007292: female gamete generation1.22E-04
10GO:0035352: NAD transmembrane transport1.22E-04
11GO:0009937: regulation of gibberellic acid mediated signaling pathway1.22E-04
12GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.22E-04
13GO:0032491: detection of molecule of fungal origin1.22E-04
14GO:0032107: regulation of response to nutrient levels1.22E-04
15GO:0035266: meristem growth1.22E-04
16GO:0008202: steroid metabolic process1.44E-04
17GO:0006024: glycosaminoglycan biosynthetic process2.82E-04
18GO:1902066: regulation of cell wall pectin metabolic process2.82E-04
19GO:0052541: plant-type cell wall cellulose metabolic process2.82E-04
20GO:0002240: response to molecule of oomycetes origin2.82E-04
21GO:0051788: response to misfolded protein2.82E-04
22GO:0010541: acropetal auxin transport2.82E-04
23GO:0019725: cellular homeostasis2.82E-04
24GO:0015012: heparan sulfate proteoglycan biosynthetic process2.82E-04
25GO:0043132: NAD transport2.82E-04
26GO:0009156: ribonucleoside monophosphate biosynthetic process2.82E-04
27GO:0046939: nucleotide phosphorylation2.82E-04
28GO:0080151: positive regulation of salicylic acid mediated signaling pathway2.82E-04
29GO:0009225: nucleotide-sugar metabolic process3.37E-04
30GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process4.65E-04
31GO:0010272: response to silver ion4.65E-04
32GO:0060968: regulation of gene silencing4.65E-04
33GO:0048586: regulation of long-day photoperiodism, flowering4.65E-04
34GO:0032922: circadian regulation of gene expression4.65E-04
35GO:1901672: positive regulation of systemic acquired resistance4.65E-04
36GO:0010253: UDP-rhamnose biosynthetic process4.65E-04
37GO:0051176: positive regulation of sulfur metabolic process4.65E-04
38GO:0010186: positive regulation of cellular defense response4.65E-04
39GO:0016998: cell wall macromolecule catabolic process5.06E-04
40GO:0070301: cellular response to hydrogen peroxide6.66E-04
41GO:0010104: regulation of ethylene-activated signaling pathway6.66E-04
42GO:0000187: activation of MAPK activity6.66E-04
43GO:0048194: Golgi vesicle budding6.66E-04
44GO:0006886: intracellular protein transport7.75E-04
45GO:0060548: negative regulation of cell death8.84E-04
46GO:0033320: UDP-D-xylose biosynthetic process8.84E-04
47GO:0048638: regulation of developmental growth8.84E-04
48GO:0033356: UDP-L-arabinose metabolic process8.84E-04
49GO:0006878: cellular copper ion homeostasis8.84E-04
50GO:0009165: nucleotide biosynthetic process8.84E-04
51GO:0046686: response to cadmium ion9.65E-04
52GO:0016042: lipid catabolic process9.69E-04
53GO:0009435: NAD biosynthetic process1.12E-03
54GO:0006665: sphingolipid metabolic process1.12E-03
55GO:0098719: sodium ion import across plasma membrane1.12E-03
56GO:0006564: L-serine biosynthetic process1.12E-03
57GO:0048232: male gamete generation1.37E-03
58GO:0043248: proteasome assembly1.37E-03
59GO:0042732: D-xylose metabolic process1.37E-03
60GO:0042176: regulation of protein catabolic process1.37E-03
61GO:0010315: auxin efflux1.37E-03
62GO:0060918: auxin transport1.37E-03
63GO:0009117: nucleotide metabolic process1.37E-03
64GO:0002238: response to molecule of fungal origin1.37E-03
65GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.37E-03
66GO:0048827: phyllome development1.37E-03
67GO:0009615: response to virus1.42E-03
68GO:0010150: leaf senescence1.46E-03
69GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.64E-03
70GO:0046470: phosphatidylcholine metabolic process1.92E-03
71GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.92E-03
72GO:0051510: regulation of unidimensional cell growth1.92E-03
73GO:0009610: response to symbiotic fungus1.92E-03
74GO:0048527: lateral root development2.13E-03
75GO:0009631: cold acclimation2.13E-03
76GO:0010078: maintenance of root meristem identity2.22E-03
77GO:0001558: regulation of cell growth2.54E-03
78GO:0010204: defense response signaling pathway, resistance gene-independent2.54E-03
79GO:0006897: endocytosis2.76E-03
80GO:0007338: single fertilization2.87E-03
81GO:0051707: response to other organism2.99E-03
82GO:0090332: stomatal closure3.21E-03
83GO:0048268: clathrin coat assembly3.21E-03
84GO:0051453: regulation of intracellular pH3.21E-03
85GO:0051555: flavonol biosynthetic process3.57E-03
86GO:0006032: chitin catabolic process3.57E-03
87GO:0048829: root cap development3.57E-03
88GO:0010015: root morphogenesis3.94E-03
89GO:0072593: reactive oxygen species metabolic process3.94E-03
90GO:0000272: polysaccharide catabolic process3.94E-03
91GO:0048229: gametophyte development3.94E-03
92GO:0006790: sulfur compound metabolic process4.32E-03
93GO:0006869: lipid transport4.69E-03
94GO:0010102: lateral root morphogenesis4.71E-03
95GO:0055046: microgametogenesis4.71E-03
96GO:0048367: shoot system development4.90E-03
97GO:0002237: response to molecule of bacterial origin5.12E-03
98GO:0009933: meristem structural organization5.12E-03
99GO:0090351: seedling development5.54E-03
100GO:0070588: calcium ion transmembrane transport5.54E-03
101GO:0046854: phosphatidylinositol phosphorylation5.54E-03
102GO:0048364: root development5.74E-03
103GO:0018105: peptidyl-serine phosphorylation5.87E-03
104GO:0009116: nucleoside metabolic process6.42E-03
105GO:0000027: ribosomal large subunit assembly6.42E-03
106GO:0043622: cortical microtubule organization6.87E-03
107GO:0007017: microtubule-based process6.87E-03
108GO:0042742: defense response to bacterium7.01E-03
109GO:0010431: seed maturation7.34E-03
110GO:0009814: defense response, incompatible interaction7.81E-03
111GO:0016226: iron-sulfur cluster assembly7.81E-03
112GO:2000022: regulation of jasmonic acid mediated signaling pathway7.81E-03
113GO:0030433: ubiquitin-dependent ERAD pathway7.81E-03
114GO:0080092: regulation of pollen tube growth7.81E-03
115GO:0042127: regulation of cell proliferation8.80E-03
116GO:0042147: retrograde transport, endosome to Golgi9.31E-03
117GO:0010051: xylem and phloem pattern formation9.83E-03
118GO:0010087: phloem or xylem histogenesis9.83E-03
119GO:0008360: regulation of cell shape1.04E-02
120GO:0006885: regulation of pH1.04E-02
121GO:0006814: sodium ion transport1.09E-02
122GO:0050832: defense response to fungus1.14E-02
123GO:0006623: protein targeting to vacuole1.15E-02
124GO:0010183: pollen tube guidance1.15E-02
125GO:0006891: intra-Golgi vesicle-mediated transport1.20E-02
126GO:0032502: developmental process1.26E-02
127GO:0030163: protein catabolic process1.32E-02
128GO:0009567: double fertilization forming a zygote and endosperm1.38E-02
129GO:0071805: potassium ion transmembrane transport1.44E-02
130GO:0051607: defense response to virus1.50E-02
131GO:0000910: cytokinesis1.50E-02
132GO:0010029: regulation of seed germination1.62E-02
133GO:0009816: defense response to bacterium, incompatible interaction1.62E-02
134GO:0006970: response to osmotic stress1.65E-02
135GO:0009627: systemic acquired resistance1.69E-02
136GO:0048573: photoperiodism, flowering1.75E-02
137GO:0009817: defense response to fungus, incompatible interaction1.88E-02
138GO:0030244: cellulose biosynthetic process1.88E-02
139GO:0008219: cell death1.88E-02
140GO:0010311: lateral root formation1.95E-02
141GO:0009832: plant-type cell wall biogenesis1.95E-02
142GO:0016192: vesicle-mediated transport2.00E-02
143GO:0006499: N-terminal protein myristoylation2.02E-02
144GO:0007568: aging2.09E-02
145GO:0007165: signal transduction2.12E-02
146GO:0045087: innate immune response2.23E-02
147GO:0006839: mitochondrial transport2.44E-02
148GO:0016310: phosphorylation2.69E-02
149GO:0009965: leaf morphogenesis2.90E-02
150GO:0000165: MAPK cascade3.06E-02
151GO:0006812: cation transport3.14E-02
152GO:0009809: lignin biosynthetic process3.30E-02
153GO:0006486: protein glycosylation3.30E-02
154GO:0006813: potassium ion transport3.30E-02
155GO:0010224: response to UV-B3.38E-02
156GO:0006417: regulation of translation3.55E-02
157GO:0009620: response to fungus3.98E-02
158GO:0006396: RNA processing4.33E-02
159GO:0009738: abscisic acid-activated signaling pathway4.79E-02
RankGO TermAdjusted P value
1GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
2GO:0005548: phospholipid transporter activity0.00E+00
3GO:0008734: L-aspartate oxidase activity0.00E+00
4GO:0018580: nitronate monooxygenase activity0.00E+00
5GO:0019779: Atg8 activating enzyme activity7.51E-07
6GO:0008142: oxysterol binding9.69E-05
7GO:0004630: phospholipase D activity9.69E-05
8GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.69E-05
9GO:0019786: Atg8-specific protease activity1.22E-04
10GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.65E-04
11GO:0004617: phosphoglycerate dehydrogenase activity2.82E-04
12GO:0010280: UDP-L-rhamnose synthase activity2.82E-04
13GO:0051724: NAD transporter activity2.82E-04
14GO:0032934: sterol binding2.82E-04
15GO:0050377: UDP-glucose 4,6-dehydratase activity2.82E-04
16GO:1990585: hydroxyproline O-arabinosyltransferase activity2.82E-04
17GO:0004385: guanylate kinase activity2.82E-04
18GO:0008460: dTDP-glucose 4,6-dehydratase activity2.82E-04
19GO:0042409: caffeoyl-CoA O-methyltransferase activity4.65E-04
20GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity4.65E-04
21GO:0004749: ribose phosphate diphosphokinase activity6.66E-04
22GO:0019201: nucleotide kinase activity6.66E-04
23GO:0035529: NADH pyrophosphatase activity6.66E-04
24GO:0019776: Atg8 ligase activity8.84E-04
25GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.12E-03
26GO:0047631: ADP-ribose diphosphatase activity1.12E-03
27GO:0015385: sodium:proton antiporter activity1.13E-03
28GO:0048040: UDP-glucuronate decarboxylase activity1.37E-03
29GO:0031593: polyubiquitin binding1.37E-03
30GO:0047714: galactolipase activity1.37E-03
31GO:0000210: NAD+ diphosphatase activity1.37E-03
32GO:0036402: proteasome-activating ATPase activity1.37E-03
33GO:0070403: NAD+ binding1.64E-03
34GO:0015631: tubulin binding1.64E-03
35GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.64E-03
36GO:0003950: NAD+ ADP-ribosyltransferase activity1.64E-03
37GO:0004012: phospholipid-translocating ATPase activity1.64E-03
38GO:0004017: adenylate kinase activity1.64E-03
39GO:0008320: protein transmembrane transporter activity1.92E-03
40GO:0005544: calcium-dependent phospholipid binding2.22E-03
41GO:0004525: ribonuclease III activity2.22E-03
42GO:0004708: MAP kinase kinase activity2.22E-03
43GO:0000287: magnesium ion binding2.47E-03
44GO:0008970: phosphatidylcholine 1-acylhydrolase activity2.54E-03
45GO:0004674: protein serine/threonine kinase activity3.03E-03
46GO:0005545: 1-phosphatidylinositol binding3.57E-03
47GO:0008047: enzyme activator activity3.57E-03
48GO:0030234: enzyme regulator activity3.57E-03
49GO:0004568: chitinase activity3.57E-03
50GO:0008171: O-methyltransferase activity3.57E-03
51GO:0051287: NAD binding3.61E-03
52GO:0015386: potassium:proton antiporter activity3.94E-03
53GO:0005388: calcium-transporting ATPase activity4.71E-03
54GO:0004565: beta-galactosidase activity4.71E-03
55GO:0022857: transmembrane transporter activity5.37E-03
56GO:0017025: TBP-class protein binding5.54E-03
57GO:0008061: chitin binding5.54E-03
58GO:0004190: aspartic-type endopeptidase activity5.54E-03
59GO:0004867: serine-type endopeptidase inhibitor activity5.54E-03
60GO:0043130: ubiquitin binding6.42E-03
61GO:0001046: core promoter sequence-specific DNA binding6.42E-03
62GO:0035251: UDP-glucosyltransferase activity7.34E-03
63GO:0008565: protein transporter activity8.54E-03
64GO:0047134: protein-disulfide reductase activity9.31E-03
65GO:0005451: monovalent cation:proton antiporter activity9.83E-03
66GO:0001085: RNA polymerase II transcription factor binding1.04E-02
67GO:0030276: clathrin binding1.04E-02
68GO:0004791: thioredoxin-disulfide reductase activity1.09E-02
69GO:0016853: isomerase activity1.09E-02
70GO:0015299: solute:proton antiporter activity1.09E-02
71GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.44E-02
72GO:0005200: structural constituent of cytoskeleton1.44E-02
73GO:0016597: amino acid binding1.50E-02
74GO:0051213: dioxygenase activity1.56E-02
75GO:0016301: kinase activity1.71E-02
76GO:0004806: triglyceride lipase activity1.75E-02
77GO:0030247: polysaccharide binding1.75E-02
78GO:0005096: GTPase activator activity1.95E-02
79GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.09E-02
80GO:0005525: GTP binding2.12E-02
81GO:0005509: calcium ion binding2.48E-02
82GO:0005524: ATP binding2.50E-02
83GO:0003924: GTPase activity2.81E-02
84GO:0035091: phosphatidylinositol binding2.82E-02
85GO:0005198: structural molecule activity2.90E-02
86GO:0031625: ubiquitin protein ligase binding3.55E-02
87GO:0008289: lipid binding3.90E-02
88GO:0046872: metal ion binding4.52E-02
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Gene type



Gene DE type