Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0002084: protein depalmitoylation0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:0010401: pectic galactan metabolic process0.00E+00
6GO:0034756: regulation of iron ion transport0.00E+00
7GO:0055074: calcium ion homeostasis2.19E-05
8GO:0003006: developmental process involved in reproduction1.90E-04
9GO:0009814: defense response, incompatible interaction2.60E-04
10GO:0071369: cellular response to ethylene stimulus2.93E-04
11GO:0042964: thioredoxin reduction3.73E-04
12GO:0032107: regulation of response to nutrient levels3.73E-04
13GO:0035266: meristem growth3.73E-04
14GO:0016337: single organismal cell-cell adhesion3.73E-04
15GO:0007292: female gamete generation3.73E-04
16GO:0009623: response to parasitic fungus3.73E-04
17GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.73E-04
18GO:0009700: indole phytoalexin biosynthetic process3.73E-04
19GO:0006680: glucosylceramide catabolic process3.73E-04
20GO:0006623: protein targeting to vacuole5.38E-04
21GO:0009156: ribonucleoside monophosphate biosynthetic process8.10E-04
22GO:0080183: response to photooxidative stress8.10E-04
23GO:0046939: nucleotide phosphorylation8.10E-04
24GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.10E-04
25GO:0006024: glycosaminoglycan biosynthetic process8.10E-04
26GO:0048569: post-embryonic animal organ development8.10E-04
27GO:0052541: plant-type cell wall cellulose metabolic process8.10E-04
28GO:0042853: L-alanine catabolic process8.10E-04
29GO:0006672: ceramide metabolic process8.10E-04
30GO:0051788: response to misfolded protein8.10E-04
31GO:0008535: respiratory chain complex IV assembly8.10E-04
32GO:0051252: regulation of RNA metabolic process8.10E-04
33GO:0015012: heparan sulfate proteoglycan biosynthetic process8.10E-04
34GO:0043132: NAD transport8.10E-04
35GO:0046686: response to cadmium ion1.06E-03
36GO:0042742: defense response to bacterium1.06E-03
37GO:0009627: systemic acquired resistance1.07E-03
38GO:0006790: sulfur compound metabolic process1.11E-03
39GO:0044375: regulation of peroxisome size1.31E-03
40GO:0045836: positive regulation of meiotic nuclear division1.31E-03
41GO:0006517: protein deglycosylation1.31E-03
42GO:0010272: response to silver ion1.31E-03
43GO:0060968: regulation of gene silencing1.31E-03
44GO:0071367: cellular response to brassinosteroid stimulus1.31E-03
45GO:0061158: 3'-UTR-mediated mRNA destabilization1.31E-03
46GO:0017006: protein-tetrapyrrole linkage1.31E-03
47GO:0006788: heme oxidation1.31E-03
48GO:0009058: biosynthetic process1.58E-03
49GO:0046854: phosphatidylinositol phosphorylation1.58E-03
50GO:0010039: response to iron ion1.58E-03
51GO:0032877: positive regulation of DNA endoreduplication1.89E-03
52GO:0000187: activation of MAPK activity1.89E-03
53GO:0070301: cellular response to hydrogen peroxide1.89E-03
54GO:0009584: detection of visible light1.89E-03
55GO:0072334: UDP-galactose transmembrane transport1.89E-03
56GO:0010731: protein glutathionylation1.89E-03
57GO:0010104: regulation of ethylene-activated signaling pathway1.89E-03
58GO:0015858: nucleoside transport1.89E-03
59GO:0016998: cell wall macromolecule catabolic process2.37E-03
60GO:0051707: response to other organism2.43E-03
61GO:0009165: nucleotide biosynthetic process2.54E-03
62GO:0033320: UDP-D-xylose biosynthetic process2.54E-03
63GO:0006536: glutamate metabolic process2.54E-03
64GO:0010363: regulation of plant-type hypersensitive response2.54E-03
65GO:0030433: ubiquitin-dependent ERAD pathway2.59E-03
66GO:0010227: floral organ abscission2.83E-03
67GO:0009435: NAD biosynthetic process3.25E-03
68GO:0006665: sphingolipid metabolic process3.25E-03
69GO:0045927: positive regulation of growth3.25E-03
70GO:0046283: anthocyanin-containing compound metabolic process3.25E-03
71GO:0006656: phosphatidylcholine biosynthetic process3.25E-03
72GO:0097428: protein maturation by iron-sulfur cluster transfer3.25E-03
73GO:0042147: retrograde transport, endosome to Golgi3.33E-03
74GO:0016310: phosphorylation3.40E-03
75GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.02E-03
76GO:0048827: phyllome development4.02E-03
77GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.02E-03
78GO:0048232: male gamete generation4.02E-03
79GO:0043248: proteasome assembly4.02E-03
80GO:0042732: D-xylose metabolic process4.02E-03
81GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity4.02E-03
82GO:0060918: auxin transport4.02E-03
83GO:0006139: nucleobase-containing compound metabolic process4.02E-03
84GO:0042176: regulation of protein catabolic process4.02E-03
85GO:0048579: negative regulation of long-day photoperiodism, flowering4.02E-03
86GO:0010183: pollen tube guidance4.48E-03
87GO:0048316: seed development4.59E-03
88GO:0009626: plant-type hypersensitive response4.77E-03
89GO:0006891: intra-Golgi vesicle-mediated transport4.79E-03
90GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.85E-03
91GO:0048280: vesicle fusion with Golgi apparatus4.85E-03
92GO:0080027: response to herbivore5.73E-03
93GO:0007050: cell cycle arrest5.73E-03
94GO:0015937: coenzyme A biosynthetic process5.73E-03
95GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.73E-03
96GO:0006468: protein phosphorylation5.99E-03
97GO:0051607: defense response to virus6.55E-03
98GO:2000070: regulation of response to water deprivation6.65E-03
99GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.65E-03
100GO:0009819: drought recovery6.65E-03
101GO:0010078: maintenance of root meristem identity6.65E-03
102GO:0006491: N-glycan processing6.65E-03
103GO:0009615: response to virus6.94E-03
104GO:0006002: fructose 6-phosphate metabolic process7.64E-03
105GO:0001558: regulation of cell growth7.64E-03
106GO:0019430: removal of superoxide radicals7.64E-03
107GO:0010120: camalexin biosynthetic process7.64E-03
108GO:0009657: plastid organization7.64E-03
109GO:0010204: defense response signaling pathway, resistance gene-independent7.64E-03
110GO:0045454: cell redox homeostasis8.48E-03
111GO:0015780: nucleotide-sugar transport8.66E-03
112GO:0010112: regulation of systemic acquired resistance8.66E-03
113GO:0008219: cell death9.07E-03
114GO:0043067: regulation of programmed cell death9.74E-03
115GO:0090332: stomatal closure9.74E-03
116GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.74E-03
117GO:0008202: steroid metabolic process9.74E-03
118GO:0006499: N-terminal protein myristoylation1.00E-02
119GO:0009407: toxin catabolic process1.00E-02
120GO:0010043: response to zinc ion1.05E-02
121GO:0043069: negative regulation of programmed cell death1.09E-02
122GO:0048829: root cap development1.09E-02
123GO:0009870: defense response signaling pathway, resistance gene-dependent1.09E-02
124GO:0006896: Golgi to vacuole transport1.09E-02
125GO:0006032: chitin catabolic process1.09E-02
126GO:0010150: leaf senescence1.12E-02
127GO:0045087: innate immune response1.15E-02
128GO:0010015: root morphogenesis1.20E-02
129GO:0009089: lysine biosynthetic process via diaminopimelate1.20E-02
130GO:0072593: reactive oxygen species metabolic process1.20E-02
131GO:0000272: polysaccharide catabolic process1.20E-02
132GO:0016925: protein sumoylation1.33E-02
133GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.33E-02
134GO:0007166: cell surface receptor signaling pathway1.33E-02
135GO:0006511: ubiquitin-dependent protein catabolic process1.43E-02
136GO:0055046: microgametogenesis1.45E-02
137GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.45E-02
138GO:0006626: protein targeting to mitochondrion1.45E-02
139GO:0010102: lateral root morphogenesis1.45E-02
140GO:0009266: response to temperature stimulus1.58E-02
141GO:0006541: glutamine metabolic process1.58E-02
142GO:0009933: meristem structural organization1.58E-02
143GO:0009636: response to toxic substance1.68E-02
144GO:0090351: seedling development1.71E-02
145GO:0070588: calcium ion transmembrane transport1.71E-02
146GO:0010053: root epidermal cell differentiation1.71E-02
147GO:0009225: nucleotide-sugar metabolic process1.71E-02
148GO:0042343: indole glucosinolate metabolic process1.71E-02
149GO:0071732: cellular response to nitric oxide1.71E-02
150GO:0034976: response to endoplasmic reticulum stress1.85E-02
151GO:0009116: nucleoside metabolic process1.99E-02
152GO:0051302: regulation of cell division2.14E-02
153GO:0098542: defense response to other organism2.29E-02
154GO:0031408: oxylipin biosynthetic process2.29E-02
155GO:0051321: meiotic cell cycle2.29E-02
156GO:0009735: response to cytokinin2.41E-02
157GO:0080092: regulation of pollen tube growth2.44E-02
158GO:0071456: cellular response to hypoxia2.44E-02
159GO:0010017: red or far-red light signaling pathway2.44E-02
160GO:0009625: response to insect2.60E-02
161GO:0006012: galactose metabolic process2.60E-02
162GO:0071215: cellular response to abscisic acid stimulus2.60E-02
163GO:0046777: protein autophosphorylation2.78E-02
164GO:0044550: secondary metabolite biosynthetic process2.84E-02
165GO:0016117: carotenoid biosynthetic process2.92E-02
166GO:0034220: ion transmembrane transport3.08E-02
167GO:0010051: xylem and phloem pattern formation3.08E-02
168GO:0010087: phloem or xylem histogenesis3.08E-02
169GO:0048544: recognition of pollen3.42E-02
170GO:0055072: iron ion homeostasis3.60E-02
171GO:0055085: transmembrane transport3.89E-02
172GO:0009630: gravitropism3.96E-02
173GO:0030163: protein catabolic process4.14E-02
174GO:0071281: cellular response to iron ion4.14E-02
175GO:0009651: response to salt stress4.17E-02
176GO:0015031: protein transport4.18E-02
177GO:0006914: autophagy4.33E-02
178GO:0006904: vesicle docking involved in exocytosis4.52E-02
179GO:0040008: regulation of growth4.71E-02
180GO:0000910: cytokinesis4.71E-02
181GO:0016579: protein deubiquitination4.71E-02
182GO:0001666: response to hypoxia4.91E-02
RankGO TermAdjusted P value
1GO:0019205: nucleobase-containing compound kinase activity0.00E+00
2GO:0051766: inositol trisphosphate kinase activity0.00E+00
3GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
4GO:0008734: L-aspartate oxidase activity0.00E+00
5GO:0051670: inulinase activity0.00E+00
6GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
7GO:0044610: FMN transmembrane transporter activity0.00E+00
8GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
9GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity2.19E-05
10GO:0009916: alternative oxidase activity8.50E-05
11GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.57E-04
12GO:0010285: L,L-diaminopimelate aminotransferase activity3.73E-04
13GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity3.73E-04
14GO:2001227: quercitrin binding3.73E-04
15GO:0000824: inositol tetrakisphosphate 3-kinase activity3.73E-04
16GO:0004105: choline-phosphate cytidylyltransferase activity3.73E-04
17GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.73E-04
18GO:0047326: inositol tetrakisphosphate 5-kinase activity3.73E-04
19GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity3.73E-04
20GO:0048037: cofactor binding3.73E-04
21GO:0051669: fructan beta-fructosidase activity3.73E-04
22GO:0004348: glucosylceramidase activity3.73E-04
23GO:0004633: phosphopantothenoylcysteine decarboxylase activity3.73E-04
24GO:0015230: FAD transmembrane transporter activity3.73E-04
25GO:0031219: levanase activity3.73E-04
26GO:2001147: camalexin binding3.73E-04
27GO:0016301: kinase activity4.31E-04
28GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity8.10E-04
29GO:0004776: succinate-CoA ligase (GDP-forming) activity8.10E-04
30GO:0004566: beta-glucuronidase activity8.10E-04
31GO:0015228: coenzyme A transmembrane transporter activity8.10E-04
32GO:0009883: red or far-red light photoreceptor activity8.10E-04
33GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity8.10E-04
34GO:0051724: NAD transporter activity8.10E-04
35GO:0008428: ribonuclease inhibitor activity8.10E-04
36GO:0008805: carbon-monoxide oxygenase activity8.10E-04
37GO:0004338: glucan exo-1,3-beta-glucosidase activity8.10E-04
38GO:0004775: succinate-CoA ligase (ADP-forming) activity8.10E-04
39GO:0051980: iron-nicotianamine transmembrane transporter activity8.10E-04
40GO:0004568: chitinase activity8.43E-04
41GO:0046872: metal ion binding8.54E-04
42GO:0008559: xenobiotic-transporting ATPase activity9.70E-04
43GO:0030247: polysaccharide binding1.15E-03
44GO:0008020: G-protein coupled photoreceptor activity1.31E-03
45GO:0004867: serine-type endopeptidase inhibitor activity1.58E-03
46GO:0008061: chitin binding1.58E-03
47GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.89E-03
48GO:0004351: glutamate decarboxylase activity1.89E-03
49GO:0004749: ribose phosphate diphosphokinase activity1.89E-03
50GO:0035529: NADH pyrophosphatase activity1.89E-03
51GO:0019201: nucleotide kinase activity1.89E-03
52GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.89E-03
53GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.89E-03
54GO:0035251: UDP-glucosyltransferase activity2.37E-03
55GO:0005524: ATP binding2.51E-03
56GO:0046527: glucosyltransferase activity2.54E-03
57GO:0004576: oligosaccharyl transferase activity2.54E-03
58GO:0016004: phospholipase activator activity2.54E-03
59GO:0004392: heme oxygenase (decyclizing) activity2.54E-03
60GO:0005509: calcium ion binding2.74E-03
61GO:0047631: ADP-ribose diphosphatase activity3.25E-03
62GO:0005459: UDP-galactose transmembrane transporter activity3.25E-03
63GO:0008948: oxaloacetate decarboxylase activity3.25E-03
64GO:0080122: AMP transmembrane transporter activity3.25E-03
65GO:0004040: amidase activity3.25E-03
66GO:0031386: protein tag3.25E-03
67GO:0048040: UDP-glucuronate decarboxylase activity4.02E-03
68GO:0008474: palmitoyl-(protein) hydrolase activity4.02E-03
69GO:0031593: polyubiquitin binding4.02E-03
70GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity4.02E-03
71GO:0000210: NAD+ diphosphatase activity4.02E-03
72GO:0036402: proteasome-activating ATPase activity4.02E-03
73GO:0004791: thioredoxin-disulfide reductase activity4.18E-03
74GO:0004872: receptor activity4.48E-03
75GO:0051020: GTPase binding4.85E-03
76GO:0015217: ADP transmembrane transporter activity4.85E-03
77GO:0070403: NAD+ binding4.85E-03
78GO:0004017: adenylate kinase activity4.85E-03
79GO:0005347: ATP transmembrane transporter activity4.85E-03
80GO:0004656: procollagen-proline 4-dioxygenase activity4.85E-03
81GO:0022857: transmembrane transporter activity5.17E-03
82GO:0005516: calmodulin binding5.50E-03
83GO:0004620: phospholipase activity5.73E-03
84GO:0005338: nucleotide-sugar transmembrane transporter activity5.73E-03
85GO:0102425: myricetin 3-O-glucosyltransferase activity5.73E-03
86GO:0102360: daphnetin 3-O-glucosyltransferase activity5.73E-03
87GO:0009881: photoreceptor activity5.73E-03
88GO:0003872: 6-phosphofructokinase activity5.73E-03
89GO:0043295: glutathione binding5.73E-03
90GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.18E-03
91GO:0004708: MAP kinase kinase activity6.65E-03
92GO:0004714: transmembrane receptor protein tyrosine kinase activity6.65E-03
93GO:0047893: flavonol 3-O-glucosyltransferase activity6.65E-03
94GO:0004034: aldose 1-epimerase activity6.65E-03
95GO:0004525: ribonuclease III activity6.65E-03
96GO:0008142: oxysterol binding7.64E-03
97GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen7.69E-03
98GO:0004683: calmodulin-dependent protein kinase activity8.18E-03
99GO:0030170: pyridoxal phosphate binding8.49E-03
100GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.53E-03
101GO:0031490: chromatin DNA binding9.74E-03
102GO:0030234: enzyme regulator activity1.09E-02
103GO:0016740: transferase activity1.19E-02
104GO:0008327: methyl-CpG binding1.20E-02
105GO:0047372: acylglycerol lipase activity1.20E-02
106GO:0015198: oligopeptide transporter activity1.33E-02
107GO:0004364: glutathione transferase activity1.43E-02
108GO:0000155: phosphorelay sensor kinase activity1.45E-02
109GO:0005388: calcium-transporting ATPase activity1.45E-02
110GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.45E-02
111GO:0031624: ubiquitin conjugating enzyme binding1.58E-02
112GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.58E-02
113GO:0004190: aspartic-type endopeptidase activity1.71E-02
114GO:0017025: TBP-class protein binding1.71E-02
115GO:0003712: transcription cofactor activity1.71E-02
116GO:0031418: L-ascorbic acid binding1.99E-02
117GO:0043130: ubiquitin binding1.99E-02
118GO:0001046: core promoter sequence-specific DNA binding1.99E-02
119GO:0031625: ubiquitin protein ligase binding2.23E-02
120GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.29E-02
121GO:0004540: ribonuclease activity2.29E-02
122GO:0020037: heme binding2.35E-02
123GO:0045735: nutrient reservoir activity2.38E-02
124GO:0004497: monooxygenase activity2.56E-02
125GO:0008810: cellulase activity2.60E-02
126GO:0080043: quercetin 3-O-glucosyltransferase activity2.62E-02
127GO:0080044: quercetin 7-O-glucosyltransferase activity2.62E-02
128GO:0005506: iron ion binding2.74E-02
129GO:0003727: single-stranded RNA binding2.76E-02
130GO:0003756: protein disulfide isomerase activity2.76E-02
131GO:0051082: unfolded protein binding2.87E-02
132GO:0047134: protein-disulfide reductase activity2.92E-02
133GO:0001085: RNA polymerase II transcription factor binding3.25E-02
134GO:0016853: isomerase activity3.42E-02
135GO:0010181: FMN binding3.42E-02
136GO:0004843: thiol-dependent ubiquitin-specific protease activity3.78E-02
137GO:0004674: protein serine/threonine kinase activity4.20E-02
138GO:0030246: carbohydrate binding4.23E-02
139GO:0008483: transaminase activity4.52E-02
140GO:0019825: oxygen binding4.58E-02
141GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.60E-02
142GO:0015297: antiporter activity4.71E-02
143GO:0015250: water channel activity4.91E-02
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Gene type



Gene DE type