Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G56230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0006654: phosphatidic acid biosynthetic process0.00E+00
3GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
4GO:0006623: protein targeting to vacuole6.98E-06
5GO:0009814: defense response, incompatible interaction6.94E-05
6GO:0042759: long-chain fatty acid biosynthetic process1.98E-04
7GO:0032107: regulation of response to nutrient levels1.98E-04
8GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.98E-04
9GO:0009700: indole phytoalexin biosynthetic process1.98E-04
10GO:0019725: cellular homeostasis4.43E-04
11GO:0015709: thiosulfate transport4.43E-04
12GO:0071422: succinate transmembrane transport4.43E-04
13GO:0046939: nucleotide phosphorylation4.43E-04
14GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.43E-04
15GO:1902066: regulation of cell wall pectin metabolic process4.43E-04
16GO:0042853: L-alanine catabolic process4.43E-04
17GO:0009225: nucleotide-sugar metabolic process6.52E-04
18GO:0048586: regulation of long-day photoperiodism, flowering7.22E-04
19GO:0032922: circadian regulation of gene expression7.22E-04
20GO:0010253: UDP-rhamnose biosynthetic process7.22E-04
21GO:0010186: positive regulation of cellular defense response7.22E-04
22GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process7.22E-04
23GO:1901672: positive regulation of systemic acquired resistance7.22E-04
24GO:0051707: response to other organism7.63E-04
25GO:1902290: positive regulation of defense response to oomycetes1.03E-03
26GO:0046513: ceramide biosynthetic process1.03E-03
27GO:0000187: activation of MAPK activity1.03E-03
28GO:0015729: oxaloacetate transport1.03E-03
29GO:0010104: regulation of ethylene-activated signaling pathway1.03E-03
30GO:0060548: negative regulation of cell death1.37E-03
31GO:0033320: UDP-D-xylose biosynthetic process1.37E-03
32GO:0006090: pyruvate metabolic process1.74E-03
33GO:0031365: N-terminal protein amino acid modification1.74E-03
34GO:0009435: NAD biosynthetic process1.74E-03
35GO:0071423: malate transmembrane transport1.74E-03
36GO:0060918: auxin transport2.14E-03
37GO:0006139: nucleobase-containing compound metabolic process2.14E-03
38GO:0002238: response to molecule of fungal origin2.14E-03
39GO:0042732: D-xylose metabolic process2.14E-03
40GO:0042176: regulation of protein catabolic process2.14E-03
41GO:0010315: auxin efflux2.14E-03
42GO:0035435: phosphate ion transmembrane transport2.14E-03
43GO:0006952: defense response2.44E-03
44GO:0051607: defense response to virus2.61E-03
45GO:0009615: response to virus2.76E-03
46GO:0009816: defense response to bacterium, incompatible interaction2.91E-03
47GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.03E-03
48GO:0046470: phosphatidylcholine metabolic process3.03E-03
49GO:0071446: cellular response to salicylic acid stimulus3.03E-03
50GO:1900056: negative regulation of leaf senescence3.03E-03
51GO:0080186: developmental vegetative growth3.03E-03
52GO:0008272: sulfate transport3.03E-03
53GO:1900150: regulation of defense response to fungus3.51E-03
54GO:0008219: cell death3.59E-03
55GO:0010120: camalexin biosynthetic process4.02E-03
56GO:2000031: regulation of salicylic acid mediated signaling pathway4.02E-03
57GO:0009631: cold acclimation4.15E-03
58GO:0009617: response to bacterium4.30E-03
59GO:0010112: regulation of systemic acquired resistance4.54E-03
60GO:0008202: steroid metabolic process5.10E-03
61GO:1900426: positive regulation of defense response to bacterium5.10E-03
62GO:0090332: stomatal closure5.10E-03
63GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.10E-03
64GO:0042542: response to hydrogen peroxide5.62E-03
65GO:0043069: negative regulation of programmed cell death5.67E-03
66GO:0051555: flavonol biosynthetic process5.67E-03
67GO:0000209: protein polyubiquitination6.09E-03
68GO:0009089: lysine biosynthetic process via diaminopimelate6.27E-03
69GO:0009636: response to toxic substance6.57E-03
70GO:0007165: signal transduction6.60E-03
71GO:0000165: MAPK cascade7.08E-03
72GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.08E-03
73GO:0006626: protein targeting to mitochondrion7.52E-03
74GO:0006108: malate metabolic process7.52E-03
75GO:2000028: regulation of photoperiodism, flowering7.52E-03
76GO:0050826: response to freezing7.52E-03
77GO:0010102: lateral root morphogenesis7.52E-03
78GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process7.52E-03
79GO:0002237: response to molecule of bacterial origin8.19E-03
80GO:0015031: protein transport8.56E-03
81GO:0070588: calcium ion transmembrane transport8.87E-03
82GO:0042753: positive regulation of circadian rhythm9.57E-03
83GO:0034976: response to endoplasmic reticulum stress9.57E-03
84GO:0009620: response to fungus1.03E-02
85GO:0006886: intracellular protein transport1.03E-02
86GO:0031408: oxylipin biosynthetic process1.18E-02
87GO:0016998: cell wall macromolecule catabolic process1.18E-02
88GO:0048511: rhythmic process1.18E-02
89GO:0016042: lipid catabolic process1.24E-02
90GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-02
91GO:0071456: cellular response to hypoxia1.26E-02
92GO:0009751: response to salicylic acid1.27E-02
93GO:0009625: response to insect1.34E-02
94GO:0006508: proteolysis1.40E-02
95GO:0042127: regulation of cell proliferation1.42E-02
96GO:0010051: xylem and phloem pattern formation1.59E-02
97GO:0042391: regulation of membrane potential1.59E-02
98GO:0048868: pollen tube development1.67E-02
99GO:0048544: recognition of pollen1.76E-02
100GO:0010193: response to ozone1.94E-02
101GO:0010150: leaf senescence1.95E-02
102GO:0030163: protein catabolic process2.13E-02
103GO:0009567: double fertilization forming a zygote and endosperm2.23E-02
104GO:0006904: vesicle docking involved in exocytosis2.33E-02
105GO:0001666: response to hypoxia2.53E-02
106GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.63E-02
107GO:0009627: systemic acquired resistance2.73E-02
108GO:0006888: ER to Golgi vesicle-mediated transport2.84E-02
109GO:0009407: toxin catabolic process3.27E-02
110GO:0006499: N-terminal protein myristoylation3.27E-02
111GO:0048527: lateral root development3.38E-02
112GO:0010043: response to zinc ion3.38E-02
113GO:0006468: protein phosphorylation3.38E-02
114GO:0045087: innate immune response3.61E-02
115GO:0006839: mitochondrial transport3.96E-02
116GO:0006887: exocytosis4.08E-02
117GO:0006631: fatty acid metabolic process4.08E-02
RankGO TermAdjusted P value
1GO:0034338: short-chain carboxylesterase activity0.00E+00
2GO:0019205: nucleobase-containing compound kinase activity0.00E+00
3GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
4GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
5GO:0008734: L-aspartate oxidase activity0.00E+00
6GO:0051670: inulinase activity0.00E+00
7GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
8GO:0004708: MAP kinase kinase activity1.62E-04
9GO:0031219: levanase activity1.98E-04
10GO:0010285: L,L-diaminopimelate aminotransferase activity1.98E-04
11GO:0051669: fructan beta-fructosidase activity1.98E-04
12GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.46E-04
13GO:0004338: glucan exo-1,3-beta-glucosidase activity4.43E-04
14GO:1901677: phosphate transmembrane transporter activity4.43E-04
15GO:0050291: sphingosine N-acyltransferase activity4.43E-04
16GO:0008460: dTDP-glucose 4,6-dehydratase activity4.43E-04
17GO:0010280: UDP-L-rhamnose synthase activity4.43E-04
18GO:0008805: carbon-monoxide oxygenase activity4.43E-04
19GO:0050377: UDP-glucose 4,6-dehydratase activity4.43E-04
20GO:0015117: thiosulfate transmembrane transporter activity4.43E-04
21GO:0042409: caffeoyl-CoA O-methyltransferase activity7.22E-04
22GO:0005310: dicarboxylic acid transmembrane transporter activity7.22E-04
23GO:0015141: succinate transmembrane transporter activity7.22E-04
24GO:0015131: oxaloacetate transmembrane transporter activity1.03E-03
25GO:0035529: NADH pyrophosphatase activity1.03E-03
26GO:0017077: oxidative phosphorylation uncoupler activity1.03E-03
27GO:0019201: nucleotide kinase activity1.03E-03
28GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.03E-03
29GO:0004470: malic enzyme activity1.37E-03
30GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.37E-03
31GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.37E-03
32GO:0016853: isomerase activity1.67E-03
33GO:0004623: phospholipase A2 activity1.74E-03
34GO:0047631: ADP-ribose diphosphatase activity1.74E-03
35GO:0004040: amidase activity1.74E-03
36GO:0000210: NAD+ diphosphatase activity2.14E-03
37GO:0035252: UDP-xylosyltransferase activity2.14E-03
38GO:0048040: UDP-glucuronate decarboxylase activity2.14E-03
39GO:0004017: adenylate kinase activity2.57E-03
40GO:0070403: NAD+ binding2.57E-03
41GO:0005261: cation channel activity2.57E-03
42GO:0008320: protein transmembrane transporter activity3.03E-03
43GO:0004620: phospholipase activity3.03E-03
44GO:0008235: metalloexopeptidase activity3.03E-03
45GO:0102425: myricetin 3-O-glucosyltransferase activity3.03E-03
46GO:0102360: daphnetin 3-O-glucosyltransferase activity3.03E-03
47GO:0015140: malate transmembrane transporter activity3.03E-03
48GO:0030247: polysaccharide binding3.24E-03
49GO:0047893: flavonol 3-O-glucosyltransferase activity3.51E-03
50GO:0004525: ribonuclease III activity3.51E-03
51GO:0005544: calcium-dependent phospholipid binding3.51E-03
52GO:0008142: oxysterol binding4.02E-03
53GO:0004630: phospholipase D activity4.02E-03
54GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity4.02E-03
55GO:0005509: calcium ion binding4.89E-03
56GO:0030234: enzyme regulator activity5.67E-03
57GO:0004568: chitinase activity5.67E-03
58GO:0008171: O-methyltransferase activity5.67E-03
59GO:0004177: aminopeptidase activity6.27E-03
60GO:0047372: acylglycerol lipase activity6.27E-03
61GO:0043531: ADP binding6.72E-03
62GO:0015116: sulfate transmembrane transporter activity6.89E-03
63GO:0051287: NAD binding7.08E-03
64GO:0005388: calcium-transporting ATPase activity7.52E-03
65GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism7.52E-03
66GO:0016301: kinase activity7.96E-03
67GO:0042973: glucan endo-1,3-beta-D-glucosidase activity8.19E-03
68GO:0031624: ubiquitin conjugating enzyme binding8.19E-03
69GO:0003712: transcription cofactor activity8.87E-03
70GO:0004190: aspartic-type endopeptidase activity8.87E-03
71GO:0030552: cAMP binding8.87E-03
72GO:0004867: serine-type endopeptidase inhibitor activity8.87E-03
73GO:0030553: cGMP binding8.87E-03
74GO:0001046: core promoter sequence-specific DNA binding1.03E-02
75GO:0022857: transmembrane transporter activity1.06E-02
76GO:0005216: ion channel activity1.10E-02
77GO:0005524: ATP binding1.11E-02
78GO:0008408: 3'-5' exonuclease activity1.18E-02
79GO:0035251: UDP-glucosyltransferase activity1.18E-02
80GO:0008810: cellulase activity1.34E-02
81GO:0003756: protein disulfide isomerase activity1.42E-02
82GO:0005102: receptor binding1.50E-02
83GO:0030170: pyridoxal phosphate binding1.57E-02
84GO:0005249: voltage-gated potassium channel activity1.59E-02
85GO:0030551: cyclic nucleotide binding1.59E-02
86GO:0004527: exonuclease activity1.67E-02
87GO:0001085: RNA polymerase II transcription factor binding1.67E-02
88GO:0010181: FMN binding1.76E-02
89GO:0008483: transaminase activity2.33E-02
90GO:0051213: dioxygenase activity2.53E-02
91GO:0008375: acetylglucosaminyltransferase activity2.73E-02
92GO:0004683: calmodulin-dependent protein kinase activity2.84E-02
93GO:0016491: oxidoreductase activity2.94E-02
94GO:0005096: GTPase activator activity3.16E-02
95GO:0004222: metalloendopeptidase activity3.27E-02
96GO:0050897: cobalt ion binding3.38E-02
97GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.38E-02
98GO:0004674: protein serine/threonine kinase activity3.40E-02
99GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.61E-02
100GO:0004497: monooxygenase activity3.74E-02
101GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.75E-02
102GO:0061630: ubiquitin protein ligase activity3.93E-02
103GO:0004364: glutathione transferase activity4.20E-02
104GO:0005516: calmodulin binding4.40E-02
105GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.81E-02
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Gene type



Gene DE type