co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0009102: biotin biosynthetic process	1.30E-06
6	GO:1901529: positive regulation of anion channel activity	1.17E-04
7	GO:0006518: peptide metabolic process	2.00E-04
8	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.00E-04
9	GO:0033169: histone H3-K9 demethylation	2.94E-04
10	GO:0006479: protein methylation	3.94E-04
11	GO:0006221: pyrimidine nucleotide biosynthetic process	3.94E-04
12	GO:0009913: epidermal cell differentiation	6.13E-04
13	GO:0003006: developmental process involved in reproduction	6.13E-04
14	GO:0009959: negative gravitropism	6.13E-04
15	GO:0016554: cytidine to uridine editing	6.13E-04
16	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.31E-04
17	GO:0009793: embryo development ending in seed dormancy	8.03E-04
18	GO:0006355: regulation of transcription, DNA-templated	9.45E-04
19	GO:0009733: response to auxin	1.23E-03
20	GO:0006379: mRNA cleavage	1.25E-03
21	GO:0048589: developmental growth	1.25E-03
22	GO:0048507: meristem development	1.25E-03
23	GO:0006349: regulation of gene expression by genetic imprinting	1.40E-03
24	GO:1900865: chloroplast RNA modification	1.40E-03
25	GO:0048829: root cap development	1.55E-03
26	GO:0010048: vernalization response	1.55E-03
27	GO:0009734: auxin-activated signaling pathway	1.71E-03
28	GO:0010152: pollen maturation	1.86E-03
29	GO:0010582: floral meristem determinacy	1.86E-03
30	GO:0010588: cotyledon vascular tissue pattern formation	2.03E-03
31	GO:0010102: lateral root morphogenesis	2.03E-03
32	GO:0048768: root hair cell tip growth	2.20E-03
33	GO:0048467: gynoecium development	2.20E-03
34	GO:0006636: unsaturated fatty acid biosynthetic process	2.56E-03
35	GO:0040008: regulation of growth	2.72E-03
36	GO:0003333: amino acid transmembrane transport	3.12E-03
37	GO:0048443: stamen development	3.73E-03
38	GO:0080022: primary root development	4.15E-03
39	GO:0010087: phloem or xylem histogenesis	4.15E-03
40	GO:0009960: endosperm development	4.37E-03
41	GO:0010305: leaf vascular tissue pattern formation	4.37E-03
42	GO:0048825: cotyledon development	4.81E-03
43	GO:0006351: transcription, DNA-templated	5.40E-03
44	GO:0009639: response to red or far red light	5.75E-03
45	GO:0045892: negative regulation of transcription, DNA-templated	6.59E-03
46	GO:0006865: amino acid transport	8.93E-03
47	GO:0009909: regulation of flower development	1.46E-02
48	GO:0051301: cell division	1.55E-02
49	GO:0048367: shoot system development	1.57E-02
50	GO:0045893: positive regulation of transcription, DNA-templated	1.63E-02
51	GO:0016569: covalent chromatin modification	1.67E-02
52	GO:0051726: regulation of cell cycle	1.82E-02
53	GO:0009058: biosynthetic process	2.13E-02
54	GO:0009845: seed germination	2.16E-02
55	GO:0030154: cell differentiation	3.14E-02
56	GO:0007049: cell cycle	3.80E-02
57	GO:0080167: response to karrikin	4.09E-02
58	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.19E-02
59	GO:0006952: defense response	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
2	GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity	0.00E+00
3	GO:0004141: dethiobiotin synthase activity	0.00E+00
4	GO:0016274: protein-arginine N-methyltransferase activity	4.74E-05
5	GO:0032454: histone demethylase activity (H3-K9 specific)	1.17E-04
6	GO:0042389: omega-3 fatty acid desaturase activity	1.17E-04
7	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.25E-04
8	GO:0009041: uridylate kinase activity	2.94E-04
9	GO:0010011: auxin binding	3.94E-04
10	GO:0010328: auxin influx transmembrane transporter activity	3.94E-04
11	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.11E-03
12	GO:0031490: chromatin DNA binding	1.40E-03
13	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.86E-03
14	GO:0003725: double-stranded RNA binding	2.03E-03
15	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.20E-03
16	GO:0030170: pyridoxal phosphate binding	2.30E-03
17	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.36E-03
18	GO:0043565: sequence-specific DNA binding	3.20E-03
19	GO:0003727: single-stranded RNA binding	3.73E-03
20	GO:0018024: histone-lysine N-methyltransferase activity	3.93E-03
21	GO:0019901: protein kinase binding	4.81E-03
22	GO:0008483: transaminase activity	6.00E-03
23	GO:0003723: RNA binding	6.70E-03
24	GO:0005096: GTPase activator activity	8.09E-03
25	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	8.37E-03
26	GO:0004222: metalloendopeptidase activity	8.37E-03
27	GO:0043621: protein self-association	1.16E-02
28	GO:0015293: symporter activity	1.20E-02
29	GO:0005515: protein binding	1.30E-02
30	GO:0015171: amino acid transmembrane transporter activity	1.46E-02
31	GO:0003779: actin binding	1.71E-02
32	GO:0003677: DNA binding	1.87E-02
33	GO:0003676: nucleic acid binding	3.34E-02
34	GO:0008168: methyltransferase activity	3.42E-02
35	GO:0000287: magnesium ion binding	3.47E-02
36	GO:0004674: protein serine/threonine kinase activity	4.17E-02
37	GO:0004871: signal transducer activity	4.81E-02