co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G55210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090706: specification of plant organ position	0.00E+00
2	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
3	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
4	GO:0046460: neutral lipid biosynthetic process	0.00E+00
5	GO:0031129: inductive cell-cell signaling	0.00E+00
6	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
7	GO:0019447: D-cysteine catabolic process	0.00E+00
8	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
9	GO:0070979: protein K11-linked ubiquitination	0.00E+00
10	GO:0043488: regulation of mRNA stability	0.00E+00
11	GO:0006415: translational termination	4.64E-05
12	GO:0000476: maturation of 4.5S rRNA	3.37E-04
13	GO:1902265: abscisic acid homeostasis	3.37E-04
14	GO:0000967: rRNA 5'-end processing	3.37E-04
15	GO:0051418: microtubule nucleation by microtubule organizing center	3.37E-04
16	GO:0010482: regulation of epidermal cell division	3.37E-04
17	GO:0043266: regulation of potassium ion transport	3.37E-04
18	GO:2000021: regulation of ion homeostasis	3.37E-04
19	GO:0034080: CENP-A containing nucleosome assembly	3.37E-04
20	GO:0006177: GMP biosynthetic process	3.37E-04
21	GO:0010450: inflorescence meristem growth	3.37E-04
22	GO:0051171: regulation of nitrogen compound metabolic process	3.37E-04
23	GO:0032544: plastid translation	4.41E-04
24	GO:1900865: chloroplast RNA modification	6.25E-04
25	GO:0033566: gamma-tubulin complex localization	7.34E-04
26	GO:2000039: regulation of trichome morphogenesis	7.34E-04
27	GO:1900871: chloroplast mRNA modification	7.34E-04
28	GO:0007154: cell communication	7.34E-04
29	GO:1900033: negative regulation of trichome patterning	7.34E-04
30	GO:0042814: monopolar cell growth	7.34E-04
31	GO:0015804: neutral amino acid transport	7.34E-04
32	GO:0034470: ncRNA processing	7.34E-04
33	GO:0009658: chloroplast organization	8.15E-04
34	GO:0009684: indoleacetic acid biosynthetic process	8.40E-04
35	GO:0051127: positive regulation of actin nucleation	1.19E-03
36	GO:0045604: regulation of epidermal cell differentiation	1.19E-03
37	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.19E-03
38	GO:0043693: monoterpene biosynthetic process	1.19E-03
39	GO:0001578: microtubule bundle formation	1.19E-03
40	GO:0045493: xylan catabolic process	1.19E-03
41	GO:0071398: cellular response to fatty acid	1.19E-03
42	GO:0045165: cell fate commitment	1.19E-03
43	GO:0007052: mitotic spindle organization	1.19E-03
44	GO:0031022: nuclear migration along microfilament	1.19E-03
45	GO:0090307: mitotic spindle assembly	1.71E-03
46	GO:0006164: purine nucleotide biosynthetic process	1.71E-03
47	GO:0010255: glucose mediated signaling pathway	1.71E-03
48	GO:0048530: fruit morphogenesis	1.71E-03
49	GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center	1.71E-03
50	GO:0006168: adenine salvage	1.71E-03
51	GO:0034508: centromere complex assembly	1.71E-03
52	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.71E-03
53	GO:0006166: purine ribonucleoside salvage	1.71E-03
54	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.71E-03
55	GO:0051639: actin filament network formation	1.71E-03
56	GO:0040008: regulation of growth	1.76E-03
57	GO:0022622: root system development	2.30E-03
58	GO:0015846: polyamine transport	2.30E-03
59	GO:0007020: microtubule nucleation	2.30E-03
60	GO:0009902: chloroplast relocation	2.30E-03
61	GO:0048629: trichome patterning	2.30E-03
62	GO:0051764: actin crosslink formation	2.30E-03
63	GO:0051322: anaphase	2.30E-03
64	GO:0009693: ethylene biosynthetic process	2.43E-03
65	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.87E-03
66	GO:0009585: red, far-red light phototransduction	2.93E-03
67	GO:0046785: microtubule polymerization	2.93E-03
68	GO:0045038: protein import into chloroplast thylakoid membrane	2.93E-03
69	GO:1902183: regulation of shoot apical meristem development	2.93E-03
70	GO:0044209: AMP salvage	2.93E-03
71	GO:0010158: abaxial cell fate specification	2.93E-03
72	GO:0032876: negative regulation of DNA endoreduplication	2.93E-03
73	GO:0009733: response to auxin	3.01E-03
74	GO:0000226: microtubule cytoskeleton organization	3.10E-03
75	GO:0010087: phloem or xylem histogenesis	3.10E-03
76	GO:0009958: positive gravitropism	3.34E-03
77	GO:0016554: cytidine to uridine editing	3.63E-03
78	GO:0006655: phosphatidylglycerol biosynthetic process	3.63E-03
79	GO:0032973: amino acid export	3.63E-03
80	GO:0000741: karyogamy	3.63E-03
81	GO:0009734: auxin-activated signaling pathway	4.30E-03
82	GO:0042372: phylloquinone biosynthetic process	4.37E-03
83	GO:0034389: lipid particle organization	4.37E-03
84	GO:2000033: regulation of seed dormancy process	4.37E-03
85	GO:0009903: chloroplast avoidance movement	4.37E-03
86	GO:0048444: floral organ morphogenesis	4.37E-03
87	GO:0080086: stamen filament development	4.37E-03
88	GO:0010196: nonphotochemical quenching	5.15E-03
89	GO:0032880: regulation of protein localization	5.15E-03
90	GO:0009395: phospholipid catabolic process	5.15E-03
91	GO:0048528: post-embryonic root development	5.15E-03
92	GO:0043090: amino acid import	5.15E-03
93	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.99E-03
94	GO:0033386: geranylgeranyl diphosphate biosynthetic process	5.99E-03
95	GO:0042255: ribosome assembly	5.99E-03
96	GO:0046620: regulation of organ growth	5.99E-03
97	GO:0006353: DNA-templated transcription, termination	5.99E-03
98	GO:0070413: trehalose metabolism in response to stress	5.99E-03
99	GO:0010078: maintenance of root meristem identity	5.99E-03
100	GO:0009704: de-etiolation	5.99E-03
101	GO:0032875: regulation of DNA endoreduplication	5.99E-03
102	GO:0009627: systemic acquired resistance	6.66E-03
103	GO:0009657: plastid organization	6.87E-03
104	GO:0043562: cellular response to nitrogen levels	6.87E-03
105	GO:0010093: specification of floral organ identity	6.87E-03
106	GO:0071555: cell wall organization	7.28E-03
107	GO:0009821: alkaloid biosynthetic process	7.79E-03
108	GO:0045337: farnesyl diphosphate biosynthetic process	7.79E-03
109	GO:0019432: triglyceride biosynthetic process	7.79E-03
110	GO:0080144: amino acid homeostasis	7.79E-03
111	GO:2000024: regulation of leaf development	7.79E-03
112	GO:0033384: geranyl diphosphate biosynthetic process	7.79E-03
113	GO:0000373: Group II intron splicing	7.79E-03
114	GO:0006189: 'de novo' IMP biosynthetic process	7.79E-03
115	GO:0010018: far-red light signaling pathway	8.75E-03
116	GO:0042761: very long-chain fatty acid biosynthetic process	8.75E-03
117	GO:0010380: regulation of chlorophyll biosynthetic process	8.75E-03
118	GO:0009638: phototropism	8.75E-03
119	GO:0016042: lipid catabolic process	8.85E-03
120	GO:0048527: lateral root development	9.01E-03
121	GO:0010162: seed dormancy process	9.76E-03
122	GO:0006535: cysteine biosynthetic process from serine	9.76E-03
123	GO:0045036: protein targeting to chloroplast	9.76E-03
124	GO:0006949: syncytium formation	9.76E-03
125	GO:0009773: photosynthetic electron transport in photosystem I	1.08E-02
126	GO:1903507: negative regulation of nucleic acid-templated transcription	1.08E-02
127	GO:0007166: cell surface receptor signaling pathway	1.10E-02
128	GO:0016024: CDP-diacylglycerol biosynthetic process	1.19E-02
129	GO:0008283: cell proliferation	1.28E-02
130	GO:0010588: cotyledon vascular tissue pattern formation	1.30E-02
131	GO:2000012: regulation of auxin polar transport	1.30E-02
132	GO:0030048: actin filament-based movement	1.30E-02
133	GO:0010628: positive regulation of gene expression	1.30E-02
134	GO:0030036: actin cytoskeleton organization	1.30E-02
135	GO:0006541: glutamine metabolic process	1.42E-02
136	GO:0009933: meristem structural organization	1.42E-02
137	GO:0048467: gynoecium development	1.42E-02
138	GO:0009965: leaf morphogenesis	1.44E-02
139	GO:0019853: L-ascorbic acid biosynthetic process	1.54E-02
140	GO:0010030: positive regulation of seed germination	1.54E-02
141	GO:0000162: tryptophan biosynthetic process	1.66E-02
142	GO:0010025: wax biosynthetic process	1.66E-02
143	GO:0042753: positive regulation of circadian rhythm	1.66E-02
144	GO:0009833: plant-type primary cell wall biogenesis	1.66E-02
145	GO:0006071: glycerol metabolic process	1.66E-02
146	GO:0006833: water transport	1.66E-02
147	GO:0009944: polarity specification of adaxial/abaxial axis	1.79E-02
148	GO:0030150: protein import into mitochondrial matrix	1.79E-02
149	GO:0007010: cytoskeleton organization	1.79E-02
150	GO:0010187: negative regulation of seed germination	1.79E-02
151	GO:0051017: actin filament bundle assembly	1.79E-02
152	GO:0005992: trehalose biosynthetic process	1.79E-02
153	GO:0019344: cysteine biosynthetic process	1.79E-02
154	GO:0008299: isoprenoid biosynthetic process	1.92E-02
155	GO:0043622: cortical microtubule organization	1.92E-02
156	GO:0003333: amino acid transmembrane transport	2.05E-02
157	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.19E-02
158	GO:0031348: negative regulation of defense response	2.19E-02
159	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.33E-02
160	GO:0006012: galactose metabolic process	2.33E-02
161	GO:0010091: trichome branching	2.47E-02
162	GO:0010214: seed coat development	2.47E-02
163	GO:0008284: positive regulation of cell proliferation	2.62E-02
164	GO:0016117: carotenoid biosynthetic process	2.62E-02
165	GO:0000271: polysaccharide biosynthetic process	2.77E-02
166	GO:0080022: primary root development	2.77E-02
167	GO:0008033: tRNA processing	2.77E-02
168	GO:0034220: ion transmembrane transport	2.77E-02
169	GO:0042631: cellular response to water deprivation	2.77E-02
170	GO:0008360: regulation of cell shape	2.92E-02
171	GO:0045489: pectin biosynthetic process	2.92E-02
172	GO:0010154: fruit development	2.92E-02
173	GO:0010197: polar nucleus fusion	2.92E-02
174	GO:0010182: sugar mediated signaling pathway	2.92E-02
175	GO:0007018: microtubule-based movement	3.07E-02
176	GO:0055085: transmembrane transport	3.11E-02
177	GO:0048825: cotyledon development	3.23E-02
178	GO:0009851: auxin biosynthetic process	3.23E-02
179	GO:0010583: response to cyclopentenone	3.55E-02
180	GO:0016032: viral process	3.55E-02
181	GO:0032502: developmental process	3.55E-02
182	GO:0009639: response to red or far red light	3.88E-02
183	GO:0006464: cellular protein modification process	3.88E-02
184	GO:0009828: plant-type cell wall loosening	3.88E-02
185	GO:0006413: translational initiation	3.96E-02
186	GO:0071805: potassium ion transmembrane transport	4.05E-02
187	GO:0000910: cytokinesis	4.23E-02
188	GO:0045490: pectin catabolic process	4.24E-02
189	GO:0009911: positive regulation of flower development	4.40E-02
190	GO:0010027: thylakoid membrane organization	4.40E-02
191	GO:0010029: regulation of seed germination	4.58E-02
192	GO:0010411: xyloglucan metabolic process	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
4	GO:0008660: 1-aminocyclopropane-1-carboxylate deaminase activity	0.00E+00
5	GO:0019808: polyamine binding	0.00E+00
6	GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity	0.00E+00
7	GO:0019148: D-cysteine desulfhydrase activity	0.00E+00
8	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
9	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
10	GO:0003747: translation release factor activity	2.09E-05
11	GO:0016788: hydrolase activity, acting on ester bonds	2.29E-05
12	GO:0016149: translation release factor activity, codon specific	4.01E-05
13	GO:0004040: amidase activity	1.12E-04
14	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	3.37E-04
15	GO:0050139: nicotinate-N-glucosyltransferase activity	3.37E-04
16	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	7.34E-04
17	GO:0015172: acidic amino acid transmembrane transporter activity	7.34E-04
18	GO:0050017: L-3-cyanoalanine synthase activity	7.34E-04
19	GO:0017118: lipoyltransferase activity	7.34E-04
20	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	7.34E-04
21	GO:0003938: IMP dehydrogenase activity	7.34E-04
22	GO:0004557: alpha-galactosidase activity	1.19E-03
23	GO:0004049: anthranilate synthase activity	1.19E-03
24	GO:0052692: raffinose alpha-galactosidase activity	1.19E-03
25	GO:0052689: carboxylic ester hydrolase activity	1.41E-03
26	GO:0015175: neutral amino acid transmembrane transporter activity	1.71E-03
27	GO:0003999: adenine phosphoribosyltransferase activity	1.71E-03
28	GO:0016851: magnesium chelatase activity	1.71E-03
29	GO:0008017: microtubule binding	2.03E-03
30	GO:0043015: gamma-tubulin binding	2.30E-03
31	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.30E-03
32	GO:0009044: xylan 1,4-beta-xylosidase activity	2.30E-03
33	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	2.30E-03
34	GO:0046556: alpha-L-arabinofuranosidase activity	2.30E-03
35	GO:0080032: methyl jasmonate esterase activity	2.30E-03
36	GO:0030570: pectate lyase activity	2.43E-03
37	GO:0016846: carbon-sulfur lyase activity	2.93E-03
38	GO:0016208: AMP binding	3.63E-03
39	GO:0042578: phosphoric ester hydrolase activity	3.63E-03
40	GO:0003730: mRNA 3'-UTR binding	4.37E-03
41	GO:0004144: diacylglycerol O-acyltransferase activity	4.37E-03
42	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	4.37E-03
43	GO:0004124: cysteine synthase activity	4.37E-03
44	GO:0019899: enzyme binding	5.15E-03
45	GO:0004033: aldo-keto reductase (NADP) activity	5.99E-03
46	GO:0043022: ribosome binding	5.99E-03
47	GO:0004311: farnesyltranstransferase activity	5.99E-03
48	GO:0004337: geranyltranstransferase activity	7.79E-03
49	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	7.79E-03
50	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.44E-03
51	GO:0016844: strictosidine synthase activity	8.75E-03
52	GO:0016740: transferase activity	9.11E-03
53	GO:0004805: trehalose-phosphatase activity	9.76E-03
54	GO:0008327: methyl-CpG binding	1.08E-02
55	GO:0004161: dimethylallyltranstransferase activity	1.08E-02
56	GO:0047372: acylglycerol lipase activity	1.08E-02
57	GO:0042802: identical protein binding	1.25E-02
58	GO:0003725: double-stranded RNA binding	1.30E-02
59	GO:0015266: protein channel activity	1.30E-02
60	GO:0031072: heat shock protein binding	1.30E-02
61	GO:0009982: pseudouridine synthase activity	1.30E-02
62	GO:0008083: growth factor activity	1.42E-02
63	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.42E-02
64	GO:0005528: FK506 binding	1.79E-02
65	GO:0003714: transcription corepressor activity	1.79E-02
66	GO:0031418: L-ascorbic acid binding	1.79E-02
67	GO:0003777: microtubule motor activity	1.91E-02
68	GO:0015171: amino acid transmembrane transporter activity	1.91E-02
69	GO:0015079: potassium ion transmembrane transporter activity	1.92E-02
70	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.11E-02
71	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.19E-02
72	GO:0016760: cellulose synthase (UDP-forming) activity	2.33E-02
73	GO:0003727: single-stranded RNA binding	2.47E-02
74	GO:0016746: transferase activity, transferring acyl groups	2.53E-02
75	GO:0001085: RNA polymerase II transcription factor binding	2.92E-02
76	GO:0016757: transferase activity, transferring glycosyl groups	3.15E-02
77	GO:0016829: lyase activity	3.33E-02
78	GO:0030246: carbohydrate binding	3.39E-02
79	GO:0051015: actin filament binding	3.72E-02
80	GO:0016791: phosphatase activity	3.88E-02
81	GO:0016759: cellulose synthase activity	3.88E-02
82	GO:0015250: water channel activity	4.40E-02
83	GO:0005525: GTP binding	4.53E-02
84	GO:0003743: translation initiation factor activity	4.94E-02
85	GO:0004721: phosphoprotein phosphatase activity	4.94E-02
86	GO:0030247: polysaccharide binding	4.94E-02