Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015670: carbon dioxide transport0.00E+00
2GO:0009661: chromoplast organization0.00E+00
3GO:0070206: protein trimerization0.00E+00
4GO:0006573: valine metabolic process0.00E+00
5GO:0006551: leucine metabolic process8.25E-05
6GO:0090548: response to nitrate starvation8.25E-05
7GO:1902334: fructose export from vacuole to cytoplasm8.25E-05
8GO:1902025: nitrate import8.25E-05
9GO:1904143: positive regulation of carotenoid biosynthetic process1.97E-04
10GO:0042548: regulation of photosynthesis, light reaction1.97E-04
11GO:0046621: negative regulation of organ growth3.29E-04
12GO:0009405: pathogenesis3.29E-04
13GO:0019722: calcium-mediated signaling3.94E-04
14GO:1990019: protein storage vacuole organization4.75E-04
15GO:0009765: photosynthesis, light harvesting6.32E-04
16GO:0032366: intracellular sterol transport6.32E-04
17GO:0007267: cell-cell signaling7.76E-04
18GO:0006465: signal peptide processing8.00E-04
19GO:0016120: carotene biosynthetic process8.00E-04
20GO:0009643: photosynthetic acclimation9.77E-04
21GO:0070814: hydrogen sulfide biosynthetic process9.77E-04
22GO:0009082: branched-chain amino acid biosynthetic process1.16E-03
23GO:0009099: valine biosynthetic process1.16E-03
24GO:0009554: megasporogenesis1.16E-03
25GO:0009854: oxidative photosynthetic carbon pathway1.16E-03
26GO:0010019: chloroplast-nucleus signaling pathway1.16E-03
27GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.16E-03
28GO:0009645: response to low light intensity stimulus1.36E-03
29GO:1900056: negative regulation of leaf senescence1.36E-03
30GO:0048437: floral organ development1.36E-03
31GO:0009769: photosynthesis, light harvesting in photosystem II1.36E-03
32GO:0050821: protein stabilization1.57E-03
33GO:0007155: cell adhesion1.57E-03
34GO:0048564: photosystem I assembly1.57E-03
35GO:0009097: isoleucine biosynthetic process1.79E-03
36GO:0051865: protein autoubiquitination2.02E-03
37GO:0009098: leucine biosynthetic process2.26E-03
38GO:0048354: mucilage biosynthetic process involved in seed coat development2.26E-03
39GO:0010380: regulation of chlorophyll biosynthetic process2.26E-03
40GO:0000103: sulfate assimilation2.51E-03
41GO:0009641: shade avoidance2.51E-03
42GO:0010192: mucilage biosynthetic process2.51E-03
43GO:0051555: flavonol biosynthetic process2.51E-03
44GO:0009970: cellular response to sulfate starvation2.51E-03
45GO:0006995: cellular response to nitrogen starvation2.51E-03
46GO:0043085: positive regulation of catalytic activity2.77E-03
47GO:0009750: response to fructose2.77E-03
48GO:0010223: secondary shoot formation3.59E-03
49GO:0009887: animal organ morphogenesis3.59E-03
50GO:0042343: indole glucosinolate metabolic process3.88E-03
51GO:0006863: purine nucleobase transport4.18E-03
52GO:0006833: water transport4.18E-03
53GO:0009768: photosynthesis, light harvesting in photosystem I4.80E-03
54GO:0007017: microtubule-based process4.80E-03
55GO:0051260: protein homooligomerization5.12E-03
56GO:0098542: defense response to other organism5.12E-03
57GO:0019915: lipid storage5.12E-03
58GO:0009269: response to desiccation5.12E-03
59GO:0016226: iron-sulfur cluster assembly5.45E-03
60GO:0019748: secondary metabolic process5.45E-03
61GO:0009294: DNA mediated transformation5.78E-03
62GO:0034220: ion transmembrane transport6.83E-03
63GO:0006520: cellular amino acid metabolic process7.20E-03
64GO:0009749: response to glucose7.95E-03
65GO:0071554: cell wall organization or biogenesis8.33E-03
66GO:0019761: glucosinolate biosynthetic process8.73E-03
67GO:0007264: small GTPase mediated signal transduction8.73E-03
68GO:0009658: chloroplast organization9.05E-03
69GO:0010411: xyloglucan metabolic process1.21E-02
70GO:0015995: chlorophyll biosynthetic process1.21E-02
71GO:0030244: cellulose biosynthetic process1.30E-02
72GO:0018298: protein-chromophore linkage1.30E-02
73GO:0009414: response to water deprivation1.38E-02
74GO:0010218: response to far red light1.39E-02
75GO:0009910: negative regulation of flower development1.44E-02
76GO:0009637: response to blue light1.54E-02
77GO:0009853: photorespiration1.54E-02
78GO:0006629: lipid metabolic process1.66E-02
79GO:0010114: response to red light1.84E-02
80GO:0009744: response to sucrose1.84E-02
81GO:0042546: cell wall biogenesis1.89E-02
82GO:0009644: response to high light intensity1.95E-02
83GO:0008643: carbohydrate transport1.95E-02
84GO:0009664: plant-type cell wall organization2.16E-02
85GO:0042538: hyperosmotic salinity response2.16E-02
86GO:0006810: transport2.31E-02
87GO:0006857: oligopeptide transport2.39E-02
88GO:0051726: regulation of cell cycle3.05E-02
89GO:0045893: positive regulation of transcription, DNA-templated3.39E-02
90GO:0007623: circadian rhythm4.32E-02
91GO:0010228: vegetative to reproductive phase transition of meristem4.46E-02
92GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.67E-02
93GO:0009617: response to bacterium4.89E-02
RankGO TermAdjusted P value
1GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
2GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
3GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
4GO:0016618: hydroxypyruvate reductase activity8.25E-05
5GO:0003984: acetolactate synthase activity8.25E-05
6GO:0004328: formamidase activity8.25E-05
7GO:0046906: tetrapyrrole binding8.25E-05
8GO:0047259: glucomannan 4-beta-mannosyltransferase activity8.25E-05
9GO:0005353: fructose transmembrane transporter activity1.97E-04
10GO:0080045: quercetin 3'-O-glucosyltransferase activity1.97E-04
11GO:0090729: toxin activity3.29E-04
12GO:0030267: glyoxylate reductase (NADP) activity3.29E-04
13GO:0004781: sulfate adenylyltransferase (ATP) activity3.29E-04
14GO:0032947: protein complex scaffold3.29E-04
15GO:0003861: 3-isopropylmalate dehydratase activity3.29E-04
16GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides4.75E-04
17GO:0042277: peptide binding6.32E-04
18GO:0016836: hydro-lyase activity6.32E-04
19GO:0080046: quercetin 4'-O-glucosyltransferase activity9.77E-04
20GO:0051753: mannan synthase activity1.16E-03
21GO:0019899: enzyme binding1.36E-03
22GO:0016757: transferase activity, transferring glycosyl groups1.57E-03
23GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity1.79E-03
24GO:0103095: wax ester synthase activity1.79E-03
25GO:0008515: sucrose transmembrane transporter activity2.77E-03
26GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.92E-03
27GO:0080043: quercetin 3-O-glucosyltransferase activity3.11E-03
28GO:0080044: quercetin 7-O-glucosyltransferase activity3.11E-03
29GO:0008081: phosphoric diester hydrolase activity3.31E-03
30GO:0031624: ubiquitin conjugating enzyme binding3.59E-03
31GO:0008146: sulfotransferase activity3.88E-03
32GO:0051119: sugar transmembrane transporter activity3.88E-03
33GO:0031409: pigment binding4.18E-03
34GO:0051536: iron-sulfur cluster binding4.48E-03
35GO:0005345: purine nucleobase transmembrane transporter activity4.80E-03
36GO:0008194: UDP-glycosyltransferase activity6.54E-03
37GO:0008080: N-acetyltransferase activity7.20E-03
38GO:0005355: glucose transmembrane transporter activity7.57E-03
39GO:0019901: protein kinase binding7.95E-03
40GO:0016762: xyloglucan:xyloglucosyl transferase activity8.33E-03
41GO:0016413: O-acetyltransferase activity1.04E-02
42GO:0016597: amino acid binding1.04E-02
43GO:0015250: water channel activity1.08E-02
44GO:0016168: chlorophyll binding1.12E-02
45GO:0016798: hydrolase activity, acting on glycosyl bonds1.21E-02
46GO:0004693: cyclin-dependent protein serine/threonine kinase activity1.39E-02
47GO:0004871: signal transducer activity1.41E-02
48GO:0030145: manganese ion binding1.44E-02
49GO:0005215: transporter activity1.61E-02
50GO:0004185: serine-type carboxypeptidase activity1.84E-02
51GO:0005198: structural molecule activity2.00E-02
52GO:0051287: NAD binding2.11E-02
53GO:0004672: protein kinase activity2.31E-02
54GO:0003777: microtubule motor activity2.45E-02
55GO:0045735: nutrient reservoir activity2.56E-02
56GO:0022857: transmembrane transporter activity2.80E-02
57GO:0016746: transferase activity, transferring acyl groups2.99E-02
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Gene type



Gene DE type