GO Enrichment Analysis of Co-expressed Genes with
AT5G54190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 2 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 3 | GO:0006021: inositol biosynthetic process | 8.50E-06 |
| 4 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.41E-05 |
| 5 | GO:0051171: regulation of nitrogen compound metabolic process | 9.69E-05 |
| 6 | GO:0006659: phosphatidylserine biosynthetic process | 9.69E-05 |
| 7 | GO:1902458: positive regulation of stomatal opening | 9.69E-05 |
| 8 | GO:0030187: melatonin biosynthetic process | 2.28E-04 |
| 9 | GO:1900033: negative regulation of trichome patterning | 2.28E-04 |
| 10 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.28E-04 |
| 11 | GO:0015804: neutral amino acid transport | 2.28E-04 |
| 12 | GO:0019853: L-ascorbic acid biosynthetic process | 2.48E-04 |
| 13 | GO:0033591: response to L-ascorbic acid | 3.80E-04 |
| 14 | GO:0009405: pathogenesis | 3.80E-04 |
| 15 | GO:0010589: leaf proximal/distal pattern formation | 3.80E-04 |
| 16 | GO:0080055: low-affinity nitrate transport | 3.80E-04 |
| 17 | GO:0045493: xylan catabolic process | 3.80E-04 |
| 18 | GO:0009963: positive regulation of flavonoid biosynthetic process | 5.46E-04 |
| 19 | GO:0009647: skotomorphogenesis | 5.46E-04 |
| 20 | GO:0010255: glucose mediated signaling pathway | 5.46E-04 |
| 21 | GO:0046739: transport of virus in multicellular host | 5.46E-04 |
| 22 | GO:0006168: adenine salvage | 5.46E-04 |
| 23 | GO:0006166: purine ribonucleoside salvage | 5.46E-04 |
| 24 | GO:0009765: photosynthesis, light harvesting | 7.26E-04 |
| 25 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 7.26E-04 |
| 26 | GO:0009649: entrainment of circadian clock | 7.26E-04 |
| 27 | GO:0048629: trichome patterning | 7.26E-04 |
| 28 | GO:0034052: positive regulation of plant-type hypersensitive response | 9.17E-04 |
| 29 | GO:0016120: carotene biosynthetic process | 9.17E-04 |
| 30 | GO:0046283: anthocyanin-containing compound metabolic process | 9.17E-04 |
| 31 | GO:0010236: plastoquinone biosynthetic process | 9.17E-04 |
| 32 | GO:0016123: xanthophyll biosynthetic process | 9.17E-04 |
| 33 | GO:0044209: AMP salvage | 9.17E-04 |
| 34 | GO:0046855: inositol phosphate dephosphorylation | 1.12E-03 |
| 35 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.12E-03 |
| 36 | GO:0042372: phylloquinone biosynthetic process | 1.34E-03 |
| 37 | GO:0048280: vesicle fusion with Golgi apparatus | 1.34E-03 |
| 38 | GO:0030488: tRNA methylation | 1.34E-03 |
| 39 | GO:0009648: photoperiodism | 1.34E-03 |
| 40 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 1.57E-03 |
| 41 | GO:0043068: positive regulation of programmed cell death | 1.81E-03 |
| 42 | GO:0010078: maintenance of root meristem identity | 1.81E-03 |
| 43 | GO:2000070: regulation of response to water deprivation | 1.81E-03 |
| 44 | GO:0015996: chlorophyll catabolic process | 2.07E-03 |
| 45 | GO:0007186: G-protein coupled receptor signaling pathway | 2.07E-03 |
| 46 | GO:0043562: cellular response to nitrogen levels | 2.07E-03 |
| 47 | GO:1900865: chloroplast RNA modification | 2.61E-03 |
| 48 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.61E-03 |
| 49 | GO:0010267: production of ta-siRNAs involved in RNA interference | 2.61E-03 |
| 50 | GO:0006896: Golgi to vacuole transport | 2.90E-03 |
| 51 | GO:0045036: protein targeting to chloroplast | 2.90E-03 |
| 52 | GO:0009641: shade avoidance | 2.90E-03 |
| 53 | GO:0009585: red, far-red light phototransduction | 2.96E-03 |
| 54 | GO:0009684: indoleacetic acid biosynthetic process | 3.20E-03 |
| 55 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.50E-03 |
| 56 | GO:0045037: protein import into chloroplast stroma | 3.50E-03 |
| 57 | GO:0006790: sulfur compound metabolic process | 3.50E-03 |
| 58 | GO:0010588: cotyledon vascular tissue pattern formation | 3.82E-03 |
| 59 | GO:0030048: actin filament-based movement | 3.82E-03 |
| 60 | GO:0048467: gynoecium development | 4.15E-03 |
| 61 | GO:0010143: cutin biosynthetic process | 4.15E-03 |
| 62 | GO:0006541: glutamine metabolic process | 4.15E-03 |
| 63 | GO:0010207: photosystem II assembly | 4.15E-03 |
| 64 | GO:0009266: response to temperature stimulus | 4.15E-03 |
| 65 | GO:0009742: brassinosteroid mediated signaling pathway | 4.45E-03 |
| 66 | GO:0046854: phosphatidylinositol phosphorylation | 4.49E-03 |
| 67 | GO:0000162: tryptophan biosynthetic process | 4.83E-03 |
| 68 | GO:0042753: positive regulation of circadian rhythm | 4.83E-03 |
| 69 | GO:0010187: negative regulation of seed germination | 5.19E-03 |
| 70 | GO:0003333: amino acid transmembrane transport | 5.93E-03 |
| 71 | GO:0048511: rhythmic process | 5.93E-03 |
| 72 | GO:0010017: red or far-red light signaling pathway | 6.31E-03 |
| 73 | GO:0009814: defense response, incompatible interaction | 6.31E-03 |
| 74 | GO:0006012: galactose metabolic process | 6.70E-03 |
| 75 | GO:0007623: circadian rhythm | 7.24E-03 |
| 76 | GO:0045490: pectin catabolic process | 7.24E-03 |
| 77 | GO:0042147: retrograde transport, endosome to Golgi | 7.51E-03 |
| 78 | GO:0016117: carotenoid biosynthetic process | 7.51E-03 |
| 79 | GO:0009416: response to light stimulus | 7.61E-03 |
| 80 | GO:0000271: polysaccharide biosynthetic process | 7.93E-03 |
| 81 | GO:0080022: primary root development | 7.93E-03 |
| 82 | GO:0010087: phloem or xylem histogenesis | 7.93E-03 |
| 83 | GO:0045489: pectin biosynthetic process | 8.35E-03 |
| 84 | GO:0010305: leaf vascular tissue pattern formation | 8.35E-03 |
| 85 | GO:0009958: positive gravitropism | 8.35E-03 |
| 86 | GO:0010182: sugar mediated signaling pathway | 8.35E-03 |
| 87 | GO:0009741: response to brassinosteroid | 8.35E-03 |
| 88 | GO:0007018: microtubule-based movement | 8.79E-03 |
| 89 | GO:0006623: protein targeting to vacuole | 9.23E-03 |
| 90 | GO:0009791: post-embryonic development | 9.23E-03 |
| 91 | GO:0048825: cotyledon development | 9.23E-03 |
| 92 | GO:0008654: phospholipid biosynthetic process | 9.23E-03 |
| 93 | GO:0009851: auxin biosynthetic process | 9.23E-03 |
| 94 | GO:0006891: intra-Golgi vesicle-mediated transport | 9.68E-03 |
| 95 | GO:0016032: viral process | 1.01E-02 |
| 96 | GO:1901657: glycosyl compound metabolic process | 1.06E-02 |
| 97 | GO:0016126: sterol biosynthetic process | 1.25E-02 |
| 98 | GO:0010027: thylakoid membrane organization | 1.25E-02 |
| 99 | GO:0009627: systemic acquired resistance | 1.36E-02 |
| 100 | GO:0080167: response to karrikin | 1.39E-02 |
| 101 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.41E-02 |
| 102 | GO:0010411: xyloglucan metabolic process | 1.41E-02 |
| 103 | GO:0048573: photoperiodism, flowering | 1.41E-02 |
| 104 | GO:0016311: dephosphorylation | 1.46E-02 |
| 105 | GO:0009813: flavonoid biosynthetic process | 1.57E-02 |
| 106 | GO:0000160: phosphorelay signal transduction system | 1.57E-02 |
| 107 | GO:0048527: lateral root development | 1.68E-02 |
| 108 | GO:0010119: regulation of stomatal movement | 1.68E-02 |
| 109 | GO:0009910: negative regulation of flower development | 1.68E-02 |
| 110 | GO:0045892: negative regulation of transcription, DNA-templated | 1.70E-02 |
| 111 | GO:0006865: amino acid transport | 1.73E-02 |
| 112 | GO:0016051: carbohydrate biosynthetic process | 1.79E-02 |
| 113 | GO:0006631: fatty acid metabolic process | 2.02E-02 |
| 114 | GO:0006629: lipid metabolic process | 2.06E-02 |
| 115 | GO:0009640: photomorphogenesis | 2.14E-02 |
| 116 | GO:0009644: response to high light intensity | 2.27E-02 |
| 117 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.72E-02 |
| 118 | GO:0010224: response to UV-B | 2.72E-02 |
| 119 | GO:0006857: oligopeptide transport | 2.78E-02 |
| 120 | GO:0043086: negative regulation of catalytic activity | 2.99E-02 |
| 121 | GO:0048367: shoot system development | 3.05E-02 |
| 122 | GO:0009626: plant-type hypersensitive response | 3.12E-02 |
| 123 | GO:0009740: gibberellic acid mediated signaling pathway | 3.26E-02 |
| 124 | GO:0006396: RNA processing | 3.48E-02 |
| 125 | GO:0006413: translational initiation | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 2 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 3 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 4 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 5 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 6 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 7 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 8 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 9 | GO:0019210: kinase inhibitor activity | 9.69E-05 |
| 10 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 9.69E-05 |
| 11 | GO:0008934: inositol monophosphate 1-phosphatase activity | 2.28E-04 |
| 12 | GO:0052833: inositol monophosphate 4-phosphatase activity | 2.28E-04 |
| 13 | GO:0004512: inositol-3-phosphate synthase activity | 2.28E-04 |
| 14 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 2.28E-04 |
| 15 | GO:0015172: acidic amino acid transmembrane transporter activity | 2.28E-04 |
| 16 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 2.28E-04 |
| 17 | GO:0052832: inositol monophosphate 3-phosphatase activity | 2.28E-04 |
| 18 | GO:0004148: dihydrolipoyl dehydrogenase activity | 3.80E-04 |
| 19 | GO:0005504: fatty acid binding | 3.80E-04 |
| 20 | GO:0004049: anthranilate synthase activity | 3.80E-04 |
| 21 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 3.80E-04 |
| 22 | GO:0030570: pectate lyase activity | 4.47E-04 |
| 23 | GO:0015175: neutral amino acid transmembrane transporter activity | 5.46E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.46E-04 |
| 25 | GO:0003999: adenine phosphoribosyltransferase activity | 5.46E-04 |
| 26 | GO:0035198: miRNA binding | 5.46E-04 |
| 27 | GO:0045430: chalcone isomerase activity | 7.26E-04 |
| 28 | GO:0009044: xylan 1,4-beta-xylosidase activity | 7.26E-04 |
| 29 | GO:0046556: alpha-L-arabinofuranosidase activity | 7.26E-04 |
| 30 | GO:0016846: carbon-sulfur lyase activity | 9.17E-04 |
| 31 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.12E-03 |
| 32 | GO:0042578: phosphoric ester hydrolase activity | 1.12E-03 |
| 33 | GO:0016208: AMP binding | 1.12E-03 |
| 34 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.12E-03 |
| 35 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.34E-03 |
| 36 | GO:0009927: histidine phosphotransfer kinase activity | 1.34E-03 |
| 37 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.34E-03 |
| 38 | GO:0042802: identical protein binding | 1.34E-03 |
| 39 | GO:0003993: acid phosphatase activity | 1.80E-03 |
| 40 | GO:0004033: aldo-keto reductase (NADP) activity | 1.81E-03 |
| 41 | GO:0043022: ribosome binding | 1.81E-03 |
| 42 | GO:0008173: RNA methyltransferase activity | 2.07E-03 |
| 43 | GO:0047372: acylglycerol lipase activity | 3.20E-03 |
| 44 | GO:0003777: microtubule motor activity | 3.28E-03 |
| 45 | GO:0003725: double-stranded RNA binding | 3.82E-03 |
| 46 | GO:0031072: heat shock protein binding | 3.82E-03 |
| 47 | GO:0003774: motor activity | 4.15E-03 |
| 48 | GO:0005528: FK506 binding | 5.19E-03 |
| 49 | GO:0051087: chaperone binding | 5.55E-03 |
| 50 | GO:0016829: lyase activity | 5.68E-03 |
| 51 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.31E-03 |
| 52 | GO:0008017: microtubule binding | 7.58E-03 |
| 53 | GO:0008080: N-acetyltransferase activity | 8.35E-03 |
| 54 | GO:0001085: RNA polymerase II transcription factor binding | 8.35E-03 |
| 55 | GO:0000156: phosphorelay response regulator activity | 1.06E-02 |
| 56 | GO:0016791: phosphatase activity | 1.11E-02 |
| 57 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.16E-02 |
| 58 | GO:0005507: copper ion binding | 1.19E-02 |
| 59 | GO:0102483: scopolin beta-glucosidase activity | 1.41E-02 |
| 60 | GO:0050897: cobalt ion binding | 1.68E-02 |
| 61 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.68E-02 |
| 62 | GO:0042803: protein homodimerization activity | 1.75E-02 |
| 63 | GO:0044212: transcription regulatory region DNA binding | 1.86E-02 |
| 64 | GO:0008422: beta-glucosidase activity | 1.91E-02 |
| 65 | GO:0000149: SNARE binding | 1.91E-02 |
| 66 | GO:0005484: SNAP receptor activity | 2.14E-02 |
| 67 | GO:0004185: serine-type carboxypeptidase activity | 2.14E-02 |
| 68 | GO:0004519: endonuclease activity | 2.24E-02 |
| 69 | GO:0035091: phosphatidylinositol binding | 2.27E-02 |
| 70 | GO:0005198: structural molecule activity | 2.33E-02 |
| 71 | GO:0015293: symporter activity | 2.33E-02 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.39E-02 |
| 73 | GO:0015171: amino acid transmembrane transporter activity | 2.85E-02 |
| 74 | GO:0030599: pectinesterase activity | 3.26E-02 |
| 75 | GO:0051082: unfolded protein binding | 3.41E-02 |
| 76 | GO:0016746: transferase activity, transferring acyl groups | 3.48E-02 |
| 77 | GO:0016758: transferase activity, transferring hexosyl groups | 3.92E-02 |
| 78 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.07E-02 |
| 79 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.38E-02 |
| 80 | GO:0008565: protein transporter activity | 4.54E-02 |
| 81 | GO:0046910: pectinesterase inhibitor activity | 4.78E-02 |
| 82 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.80E-02 |
| 83 | GO:0008270: zinc ion binding | 4.83E-02 |
| 84 | GO:0030246: carbohydrate binding | 4.89E-02 |