GO Enrichment Analysis of Co-expressed Genes with
AT5G54090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006264: mitochondrial DNA replication | 1.30E-05 |
| 2 | GO:0033259: plastid DNA replication | 1.30E-05 |
| 3 | GO:0010424: DNA methylation on cytosine within a CG sequence | 3.42E-05 |
| 4 | GO:0010069: zygote asymmetric cytokinesis in embryo sac | 3.42E-05 |
| 5 | GO:0010019: chloroplast-nucleus signaling pathway | 2.53E-04 |
| 6 | GO:0010098: suspensor development | 2.99E-04 |
| 7 | GO:0006349: regulation of gene expression by genetic imprinting | 4.96E-04 |
| 8 | GO:0006259: DNA metabolic process | 5.49E-04 |
| 9 | GO:0040008: regulation of growth | 5.72E-04 |
| 10 | GO:0006265: DNA topological change | 6.03E-04 |
| 11 | GO:0010216: maintenance of DNA methylation | 6.03E-04 |
| 12 | GO:0006302: double-strand break repair | 7.72E-04 |
| 13 | GO:0009294: DNA mediated transformation | 1.21E-03 |
| 14 | GO:0007059: chromosome segregation | 1.56E-03 |
| 15 | GO:0006811: ion transport | 2.78E-03 |
| 16 | GO:0009910: negative regulation of flower development | 2.87E-03 |
| 17 | GO:0006260: DNA replication | 4.13E-03 |
| 18 | GO:0016569: covalent chromatin modification | 5.43E-03 |
| 19 | GO:0006396: RNA processing | 5.77E-03 |
| 20 | GO:0009451: RNA modification | 8.40E-03 |
| 21 | GO:0009658: chloroplast organization | 1.12E-02 |
| 22 | GO:0009793: embryo development ending in seed dormancy | 1.32E-02 |
| 23 | GO:0046777: protein autophosphorylation | 1.37E-02 |
| 24 | GO:0006281: DNA repair | 1.72E-02 |
| 25 | GO:0009416: response to light stimulus | 2.59E-02 |
| 26 | GO:0045893: positive regulation of transcription, DNA-templated | 2.86E-02 |
| 27 | GO:0055085: transmembrane transport | 3.07E-02 |
| 28 | GO:0009733: response to auxin | 4.65E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 2 | GO:0034335: DNA supercoiling activity | 1.30E-05 |
| 3 | GO:0003916: DNA topoisomerase activity | 9.36E-05 |
| 4 | GO:0008409: 5'-3' exonuclease activity | 1.30E-04 |
| 5 | GO:0000293: ferric-chelate reductase activity | 2.10E-04 |
| 6 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.53E-04 |
| 7 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 3.94E-04 |
| 8 | GO:0008559: xenobiotic-transporting ATPase activity | 6.03E-04 |
| 9 | GO:0009982: pseudouridine synthase activity | 7.14E-04 |
| 10 | GO:0000175: 3'-5'-exoribonuclease activity | 7.14E-04 |
| 11 | GO:0003887: DNA-directed DNA polymerase activity | 8.91E-04 |
| 12 | GO:0008408: 3'-5' exonuclease activity | 1.08E-03 |
| 13 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.24E-03 |
| 14 | GO:0003779: actin binding | 5.54E-03 |
| 15 | GO:0046983: protein dimerization activity | 7.57E-03 |
| 16 | GO:0003723: RNA binding | 9.47E-03 |
| 17 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 9.77E-03 |
| 18 | GO:0008168: methyltransferase activity | 1.09E-02 |
| 19 | GO:0003682: chromatin binding | 1.17E-02 |
| 20 | GO:0003677: DNA binding | 1.38E-02 |
| 21 | GO:0042803: protein homodimerization activity | 1.53E-02 |
| 22 | GO:0004519: endonuclease activity | 1.83E-02 |
| 23 | GO:0000166: nucleotide binding | 2.59E-02 |