co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090470: shoot organ boundary specification	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
4	GO:0046460: neutral lipid biosynthetic process	0.00E+00
5	GO:0031054: pre-miRNA processing	0.00E+00
6	GO:0042407: cristae formation	0.00E+00
7	GO:0090279: regulation of calcium ion import	0.00E+00
8	GO:0009106: lipoate metabolic process	0.00E+00
9	GO:0090042: tubulin deacetylation	0.00E+00
10	GO:0015882: L-ascorbic acid transport	0.00E+00
11	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
12	GO:0071474: cellular hyperosmotic response	0.00E+00
13	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
14	GO:1902458: positive regulation of stomatal opening	0.00E+00
15	GO:0070125: mitochondrial translational elongation	0.00E+00
16	GO:0009249: protein lipoylation	0.00E+00
17	GO:0002184: cytoplasmic translational termination	0.00E+00
18	GO:0015995: chlorophyll biosynthetic process	1.05E-06
19	GO:0045038: protein import into chloroplast thylakoid membrane	2.82E-06
20	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.39E-06
21	GO:0010207: photosystem II assembly	6.86E-06
22	GO:1903426: regulation of reactive oxygen species biosynthetic process	8.98E-06
23	GO:0010027: thylakoid membrane organization	1.32E-05
24	GO:0005983: starch catabolic process	1.11E-04
25	GO:0015979: photosynthesis	1.93E-04
26	GO:0010190: cytochrome b6f complex assembly	2.55E-04
27	GO:0009658: chloroplast organization	4.12E-04
28	GO:0000476: maturation of 4.5S rRNA	4.51E-04
29	GO:0000967: rRNA 5'-end processing	4.51E-04
30	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	4.51E-04
31	GO:0015671: oxygen transport	4.51E-04
32	GO:0043266: regulation of potassium ion transport	4.51E-04
33	GO:0000481: maturation of 5S rRNA	4.51E-04
34	GO:0042547: cell wall modification involved in multidimensional cell growth	4.51E-04
35	GO:0043686: co-translational protein modification	4.51E-04
36	GO:2000021: regulation of ion homeostasis	4.51E-04
37	GO:0010028: xanthophyll cycle	4.51E-04
38	GO:0034337: RNA folding	4.51E-04
39	GO:0048363: mucilage pectin metabolic process	4.51E-04
40	GO:0000023: maltose metabolic process	4.51E-04
41	GO:0006605: protein targeting	5.51E-04
42	GO:2000070: regulation of response to water deprivation	5.51E-04
43	GO:0000105: histidine biosynthetic process	5.51E-04
44	GO:0032544: plastid translation	6.72E-04
45	GO:0071482: cellular response to light stimulus	6.72E-04
46	GO:0010206: photosystem II repair	8.05E-04
47	GO:0019432: triglyceride biosynthetic process	8.05E-04
48	GO:0009629: response to gravity	9.73E-04
49	GO:1900871: chloroplast mRNA modification	9.73E-04
50	GO:0006423: cysteinyl-tRNA aminoacylation	9.73E-04
51	GO:0006432: phenylalanyl-tRNA aminoacylation	9.73E-04
52	GO:0006435: threonyl-tRNA aminoacylation	9.73E-04
53	GO:0007154: cell communication	9.73E-04
54	GO:0018026: peptidyl-lysine monomethylation	9.73E-04
55	GO:0071668: plant-type cell wall assembly	9.73E-04
56	GO:0051262: protein tetramerization	9.73E-04
57	GO:0034470: ncRNA processing	9.73E-04
58	GO:0010275: NAD(P)H dehydrogenase complex assembly	9.73E-04
59	GO:0010198: synergid death	9.73E-04
60	GO:0006782: protoporphyrinogen IX biosynthetic process	1.10E-03
61	GO:0009089: lysine biosynthetic process via diaminopimelate	1.27E-03
62	GO:0006352: DNA-templated transcription, initiation	1.27E-03
63	GO:0045037: protein import into chloroplast stroma	1.45E-03
64	GO:0010589: leaf proximal/distal pattern formation	1.58E-03
65	GO:0034051: negative regulation of plant-type hypersensitive response	1.58E-03
66	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.58E-03
67	GO:0051604: protein maturation	1.58E-03
68	GO:0015940: pantothenate biosynthetic process	1.58E-03
69	GO:0045493: xylan catabolic process	1.58E-03
70	GO:0033591: response to L-ascorbic acid	1.58E-03
71	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.29E-03
72	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.29E-03
73	GO:2001141: regulation of RNA biosynthetic process	2.29E-03
74	GO:0010371: regulation of gibberellin biosynthetic process	2.29E-03
75	GO:0009102: biotin biosynthetic process	2.29E-03
76	GO:0045087: innate immune response	2.52E-03
77	GO:0035279: mRNA cleavage involved in gene silencing by miRNA	3.08E-03
78	GO:0022622: root system development	3.08E-03
79	GO:0071483: cellular response to blue light	3.08E-03
80	GO:0010109: regulation of photosynthesis	3.08E-03
81	GO:0009765: photosynthesis, light harvesting	3.08E-03
82	GO:0006631: fatty acid metabolic process	3.14E-03
83	GO:0006413: translational initiation	3.31E-03
84	GO:0000304: response to singlet oxygen	3.95E-03
85	GO:0080110: sporopollenin biosynthetic process	3.95E-03
86	GO:0016120: carotene biosynthetic process	3.95E-03
87	GO:0031365: N-terminal protein amino acid modification	3.95E-03
88	GO:0009107: lipoate biosynthetic process	3.95E-03
89	GO:0016123: xanthophyll biosynthetic process	3.95E-03
90	GO:0009306: protein secretion	4.08E-03
91	GO:0006655: phosphatidylglycerol biosynthetic process	4.89E-03
92	GO:0016554: cytidine to uridine editing	4.89E-03
93	GO:0032973: amino acid export	4.89E-03
94	GO:0034389: lipid particle organization	5.90E-03
95	GO:1901259: chloroplast rRNA processing	5.90E-03
96	GO:0030488: tRNA methylation	5.90E-03
97	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.98E-03
98	GO:0035196: production of miRNAs involved in gene silencing by miRNA	6.98E-03
99	GO:0032880: regulation of protein localization	6.98E-03
100	GO:0043090: amino acid import	6.98E-03
101	GO:0032508: DNA duplex unwinding	8.12E-03
102	GO:0048564: photosystem I assembly	8.12E-03
103	GO:0007186: G-protein coupled receptor signaling pathway	9.33E-03
104	GO:0017004: cytochrome complex assembly	9.33E-03
105	GO:0022900: electron transport chain	9.33E-03
106	GO:0015996: chlorophyll catabolic process	9.33E-03
107	GO:0009627: systemic acquired resistance	1.03E-02
108	GO:0009821: alkaloid biosynthetic process	1.06E-02
109	GO:0080144: amino acid homeostasis	1.06E-02
110	GO:0006783: heme biosynthetic process	1.06E-02
111	GO:0098656: anion transmembrane transport	1.06E-02
112	GO:0009735: response to cytokinin	1.18E-02
113	GO:0010267: production of ta-siRNAs involved in RNA interference	1.19E-02
114	GO:1900865: chloroplast RNA modification	1.19E-02
115	GO:0048354: mucilage biosynthetic process involved in seed coat development	1.19E-02
116	GO:0031425: chloroplast RNA processing	1.19E-02
117	GO:0043067: regulation of programmed cell death	1.19E-02
118	GO:0006779: porphyrin-containing compound biosynthetic process	1.19E-02
119	GO:0006535: cysteine biosynthetic process from serine	1.33E-02
120	GO:0006949: syncytium formation	1.33E-02
121	GO:0007568: aging	1.40E-02
122	GO:0019684: photosynthesis, light reaction	1.47E-02
123	GO:0008285: negative regulation of cell proliferation	1.47E-02
124	GO:0006415: translational termination	1.47E-02
125	GO:0009684: indoleacetic acid biosynthetic process	1.47E-02
126	GO:0016024: CDP-diacylglycerol biosynthetic process	1.62E-02
127	GO:0055114: oxidation-reduction process	1.64E-02
128	GO:2000012: regulation of auxin polar transport	1.78E-02
129	GO:0009725: response to hormone	1.78E-02
130	GO:0006397: mRNA processing	1.91E-02
131	GO:0009266: response to temperature stimulus	1.94E-02
132	GO:0019853: L-ascorbic acid biosynthetic process	2.10E-02
133	GO:0090351: seedling development	2.10E-02
134	GO:0000162: tryptophan biosynthetic process	2.27E-02
135	GO:0006636: unsaturated fatty acid biosynthetic process	2.27E-02
136	GO:0006071: glycerol metabolic process	2.27E-02
137	GO:0006289: nucleotide-excision repair	2.44E-02
138	GO:0019344: cysteine biosynthetic process	2.44E-02
139	GO:0008299: isoprenoid biosynthetic process	2.62E-02
140	GO:0016575: histone deacetylation	2.62E-02
141	GO:0007017: microtubule-based process	2.62E-02
142	GO:0010073: meristem maintenance	2.62E-02
143	GO:0015031: protein transport	2.68E-02
144	GO:0061077: chaperone-mediated protein folding	2.81E-02
145	GO:0031408: oxylipin biosynthetic process	2.81E-02
146	GO:0016114: terpenoid biosynthetic process	2.81E-02
147	GO:0048511: rhythmic process	2.81E-02
148	GO:0006508: proteolysis	2.82E-02
149	GO:0042254: ribosome biogenesis	2.86E-02
150	GO:0009814: defense response, incompatible interaction	2.99E-02
151	GO:0031348: negative regulation of defense response	2.99E-02
152	GO:0019748: secondary metabolic process	2.99E-02
153	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.18E-02
154	GO:0010227: floral organ abscission	3.18E-02
155	GO:0006012: galactose metabolic process	3.18E-02
156	GO:0010584: pollen exine formation	3.38E-02
157	GO:0009793: embryo development ending in seed dormancy	3.53E-02
158	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.58E-02
159	GO:0008284: positive regulation of cell proliferation	3.58E-02
160	GO:0016117: carotenoid biosynthetic process	3.58E-02
161	GO:0000271: polysaccharide biosynthetic process	3.78E-02
162	GO:0009958: positive gravitropism	3.99E-02
163	GO:0045489: pectin biosynthetic process	3.99E-02
164	GO:0010305: leaf vascular tissue pattern formation	3.99E-02
165	GO:0010197: polar nucleus fusion	3.99E-02
166	GO:0010182: sugar mediated signaling pathway	3.99E-02
167	GO:0042752: regulation of circadian rhythm	4.20E-02
168	GO:0009646: response to absence of light	4.20E-02
169	GO:0006412: translation	4.33E-02
170	GO:0010183: pollen tube guidance	4.41E-02
171	GO:0016032: viral process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0005363: maltose transmembrane transporter activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
5	GO:0004635: phosphoribosyl-AMP cyclohydrolase activity	0.00E+00
6	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
7	GO:0051721: protein phosphatase 2A binding	0.00E+00
8	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
9	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
10	GO:0050613: delta14-sterol reductase activity	0.00E+00
11	GO:0042903: tubulin deacetylase activity	0.00E+00
12	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
13	GO:0043014: alpha-tubulin binding	0.00E+00
14	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
15	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
16	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
17	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
18	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
19	GO:0004636: phosphoribosyl-ATP diphosphatase activity	0.00E+00
20	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
21	GO:0036033: mediator complex binding	0.00E+00
22	GO:0033819: lipoyl(octanoyl) transferase activity	0.00E+00
23	GO:0005048: signal sequence binding	0.00E+00
24	GO:0004076: biotin synthase activity	0.00E+00
25	GO:0016851: magnesium chelatase activity	4.41E-07
26	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	8.98E-06
27	GO:0030267: glyoxylate reductase (NADP) activity	3.09E-05
28	GO:0070402: NADPH binding	3.09E-05
29	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.10E-04
30	GO:0016987: sigma factor activity	1.17E-04
31	GO:0001053: plastid sigma factor activity	1.17E-04
32	GO:0004040: amidase activity	1.80E-04
33	GO:0005528: FK506 binding	2.57E-04
34	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.43E-04
35	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4.51E-04
36	GO:0004856: xylulokinase activity	4.51E-04
37	GO:0009496: plastoquinol--plastocyanin reductase activity	4.51E-04
38	GO:0050308: sugar-phosphatase activity	4.51E-04
39	GO:0019203: carbohydrate phosphatase activity	4.51E-04
40	GO:0004853: uroporphyrinogen decarboxylase activity	4.51E-04
41	GO:0042586: peptide deformylase activity	4.51E-04
42	GO:0005080: protein kinase C binding	4.51E-04
43	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.51E-04
44	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	4.51E-04
45	GO:0005344: oxygen transporter activity	4.51E-04
46	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	4.51E-04
47	GO:0005227: calcium activated cation channel activity	4.51E-04
48	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	4.51E-04
49	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	9.73E-04
50	GO:0016630: protochlorophyllide reductase activity	9.73E-04
51	GO:0004829: threonine-tRNA ligase activity	9.73E-04
52	GO:0004826: phenylalanine-tRNA ligase activity	9.73E-04
53	GO:0050017: L-3-cyanoalanine synthase activity	9.73E-04
54	GO:0017118: lipoyltransferase activity	9.73E-04
55	GO:0042389: omega-3 fatty acid desaturase activity	9.73E-04
56	GO:0009977: proton motive force dependent protein transmembrane transporter activity	9.73E-04
57	GO:0016415: octanoyltransferase activity	9.73E-04
58	GO:0004817: cysteine-tRNA ligase activity	9.73E-04
59	GO:0005525: GTP binding	1.27E-03
60	GO:0005504: fatty acid binding	1.58E-03
61	GO:0003913: DNA photolyase activity	1.58E-03
62	GO:0004148: dihydrolipoyl dehydrogenase activity	1.58E-03
63	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.58E-03
64	GO:0004751: ribose-5-phosphate isomerase activity	1.58E-03
65	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.58E-03
66	GO:0031072: heat shock protein binding	1.65E-03
67	GO:0008236: serine-type peptidase activity	1.75E-03
68	GO:0008266: poly(U) RNA binding	1.86E-03
69	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.24E-03
70	GO:0048487: beta-tubulin binding	2.29E-03
71	GO:0004792: thiosulfate sulfurtransferase activity	2.29E-03
72	GO:0016149: translation release factor activity, codon specific	2.29E-03
73	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.29E-03
74	GO:0043023: ribosomal large subunit binding	2.29E-03
75	GO:0035198: miRNA binding	2.29E-03
76	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.08E-03
77	GO:0070628: proteasome binding	3.08E-03
78	GO:0045430: chalcone isomerase activity	3.08E-03
79	GO:0009044: xylan 1,4-beta-xylosidase activity	3.08E-03
80	GO:0046556: alpha-L-arabinofuranosidase activity	3.08E-03
81	GO:0016279: protein-lysine N-methyltransferase activity	3.08E-03
82	GO:0004045: aminoacyl-tRNA hydrolase activity	3.08E-03
83	GO:0030570: pectate lyase activity	3.75E-03
84	GO:0003959: NADPH dehydrogenase activity	3.95E-03
85	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.95E-03
86	GO:0016491: oxidoreductase activity	4.04E-03
87	GO:0003743: translation initiation factor activity	4.67E-03
88	GO:0031593: polyubiquitin binding	4.89E-03
89	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	4.89E-03
90	GO:0042578: phosphoric ester hydrolase activity	4.89E-03
91	GO:2001070: starch binding	4.89E-03
92	GO:0005509: calcium ion binding	5.11E-03
93	GO:0016832: aldehyde-lyase activity	5.90E-03
94	GO:0005261: cation channel activity	5.90E-03
95	GO:0004144: diacylglycerol O-acyltransferase activity	5.90E-03
96	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.90E-03
97	GO:0004124: cysteine synthase activity	5.90E-03
98	GO:0009881: photoreceptor activity	6.98E-03
99	GO:0003723: RNA binding	6.98E-03
100	GO:0004033: aldo-keto reductase (NADP) activity	8.12E-03
101	GO:0043022: ribosome binding	8.12E-03
102	GO:0008312: 7S RNA binding	8.12E-03
103	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	9.33E-03
104	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	9.33E-03
105	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.06E-02
106	GO:0003747: translation release factor activity	1.06E-02
107	GO:0016844: strictosidine synthase activity	1.19E-02
108	GO:0004252: serine-type endopeptidase activity	1.22E-02
109	GO:0003729: mRNA binding	1.42E-02
110	GO:0047372: acylglycerol lipase activity	1.47E-02
111	GO:0003746: translation elongation factor activity	1.54E-02
112	GO:0000049: tRNA binding	1.62E-02
113	GO:0003725: double-stranded RNA binding	1.78E-02
114	GO:0005315: inorganic phosphate transmembrane transporter activity	1.78E-02
115	GO:0003924: GTPase activity	1.79E-02
116	GO:0008083: growth factor activity	1.94E-02
117	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.94E-02
118	GO:0051537: 2 iron, 2 sulfur cluster binding	2.15E-02
119	GO:0051536: iron-sulfur cluster binding	2.44E-02
120	GO:0004407: histone deacetylase activity	2.44E-02
121	GO:0043130: ubiquitin binding	2.44E-02
122	GO:0051087: chaperone binding	2.62E-02
123	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.68E-02
124	GO:0016788: hydrolase activity, acting on ester bonds	2.86E-02
125	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.99E-02
126	GO:0016787: hydrolase activity	3.02E-02
127	GO:0050660: flavin adenine dinucleotide binding	3.35E-02
128	GO:0003756: protein disulfide isomerase activity	3.38E-02
129	GO:0008514: organic anion transmembrane transporter activity	3.38E-02
130	GO:0051082: unfolded protein binding	3.81E-02
131	GO:0008080: N-acetyltransferase activity	3.99E-02
132	GO:0050662: coenzyme binding	4.20E-02
133	GO:0016853: isomerase activity	4.20E-02
134	GO:0004872: receptor activity	4.41E-02
135	GO:0048038: quinone binding	4.63E-02