Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0001881: receptor recycling0.00E+00
2GO:0051776: detection of redox state0.00E+00
3GO:0007031: peroxisome organization1.19E-05
4GO:0006144: purine nucleobase metabolic process1.21E-05
5GO:0071280: cellular response to copper ion1.21E-05
6GO:0019628: urate catabolic process1.21E-05
7GO:0006511: ubiquitin-dependent protein catabolic process2.74E-05
8GO:0042147: retrograde transport, endosome to Golgi3.02E-05
9GO:0071457: cellular response to ozone3.21E-05
10GO:0006623: protein targeting to vacuole4.31E-05
11GO:0008333: endosome to lysosome transport5.78E-05
12GO:0048577: negative regulation of short-day photoperiodism, flowering8.79E-05
13GO:0071484: cellular response to light intensity8.79E-05
14GO:0071329: cellular response to sucrose stimulus8.79E-05
15GO:0010109: regulation of photosynthesis1.22E-04
16GO:0010363: regulation of plant-type hypersensitive response1.22E-04
17GO:0071493: cellular response to UV-B1.59E-04
18GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.98E-04
19GO:0006121: mitochondrial electron transport, succinate to ubiquinone1.98E-04
20GO:0051603: proteolysis involved in cellular protein catabolic process2.34E-04
21GO:0048280: vesicle fusion with Golgi apparatus2.39E-04
22GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.27E-04
23GO:0019430: removal of superoxide radicals3.73E-04
24GO:0006896: Golgi to vacuole transport5.20E-04
25GO:0006807: nitrogen compound metabolic process6.76E-04
26GO:0007034: vacuolar transport7.31E-04
27GO:0046688: response to copper ion7.88E-04
28GO:0010039: response to iron ion7.88E-04
29GO:0030433: ubiquitin-dependent ERAD pathway1.08E-03
30GO:0045489: pectin biosynthetic process1.40E-03
31GO:0071472: cellular response to salt stress1.40E-03
32GO:0061025: membrane fusion1.47E-03
33GO:0006891: intra-Golgi vesicle-mediated transport1.61E-03
34GO:0010193: response to ozone1.61E-03
35GO:0006888: ER to Golgi vesicle-mediated transport2.30E-03
36GO:0006950: response to stress2.30E-03
37GO:0010043: response to zinc ion2.71E-03
38GO:0009910: negative regulation of flower development2.71E-03
39GO:0016051: carbohydrate biosynthetic process2.89E-03
40GO:0035195: gene silencing by miRNA2.89E-03
41GO:0034599: cellular response to oxidative stress2.97E-03
42GO:0000165: MAPK cascade3.90E-03
43GO:0009058: biosynthetic process6.47E-03
44GO:0015031: protein transport6.62E-03
45GO:0006413: translational initiation7.42E-03
46GO:0010150: leaf senescence7.79E-03
47GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.00E-02
48GO:0009723: response to ethylene1.17E-02
49GO:0016192: vesicle-mediated transport1.28E-02
50GO:0055114: oxidation-reduction process1.30E-02
51GO:0045454: cell redox homeostasis1.40E-02
52GO:0009651: response to salt stress1.76E-02
53GO:0009908: flower development2.27E-02
54GO:0009555: pollen development2.44E-02
55GO:0045893: positive regulation of transcription, DNA-templated2.69E-02
56GO:0071555: cell wall organization4.04E-02
57GO:0042742: defense response to bacterium4.04E-02
58GO:0006979: response to oxidative stress4.06E-02
RankGO TermAdjusted P value
1GO:0004846: urate oxidase activity0.00E+00
2GO:0004298: threonine-type endopeptidase activity1.98E-05
3GO:0000104: succinate dehydrogenase activity1.59E-04
4GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.98E-04
5GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.98E-04
6GO:0036402: proteasome-activating ATPase activity1.98E-04
7GO:0004784: superoxide dismutase activity1.98E-04
8GO:0004656: procollagen-proline 4-dioxygenase activity2.39E-04
9GO:0017025: TBP-class protein binding7.88E-04
10GO:0031418: L-ascorbic acid binding9.02E-04
11GO:0008233: peptidase activity1.01E-03
12GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.08E-03
13GO:0003713: transcription coactivator activity1.40E-03
14GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.76E-03
15GO:0016887: ATPase activity2.28E-03
16GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.89E-03
17GO:0000149: SNARE binding3.06E-03
18GO:0005484: SNAP receptor activity3.43E-03
19GO:0030170: pyridoxal phosphate binding6.70E-03
20GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding6.82E-03
21GO:0003743: translation initiation factor activity8.69E-03
22GO:0042802: identical protein binding9.21E-03
23GO:0016787: hydrolase activity1.12E-02
24GO:0004722: protein serine/threonine phosphatase activity1.49E-02
25GO:0005507: copper ion binding3.14E-02
26GO:0005506: iron ion binding3.99E-02
27GO:0046983: protein dimerization activity4.96E-02
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Gene type



Gene DE type