co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G52970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090470: shoot organ boundary specification	0.00E+00
2	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
3	GO:0006223: uracil salvage	0.00E+00
4	GO:0034337: RNA folding	0.00E+00
5	GO:0019685: photosynthesis, dark reaction	0.00E+00
6	GO:0002184: cytoplasmic translational termination	0.00E+00
7	GO:0015995: chlorophyll biosynthetic process	2.76E-09
8	GO:0015979: photosynthesis	1.90E-07
9	GO:2001141: regulation of RNA biosynthetic process	2.76E-05
10	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.76E-05
11	GO:0009735: response to cytokinin	3.25E-05
12	GO:0010021: amylopectin biosynthetic process	4.98E-05
13	GO:0055114: oxidation-reduction process	5.24E-05
14	GO:0010207: photosystem II assembly	5.34E-05
15	GO:0043097: pyrimidine nucleoside salvage	7.90E-05
16	GO:0006206: pyrimidine nucleobase metabolic process	1.15E-04
17	GO:0042549: photosystem II stabilization	1.15E-04
18	GO:0009645: response to low light intensity stimulus	2.07E-04
19	GO:0048564: photosystem I assembly	2.62E-04
20	GO:0043953: protein transport by the Tat complex	2.72E-04
21	GO:0015671: oxygen transport	2.72E-04
22	GO:1904966: positive regulation of vitamin E biosynthetic process	2.72E-04
23	GO:0000481: maturation of 5S rRNA	2.72E-04
24	GO:0015801: aromatic amino acid transport	2.72E-04
25	GO:1904964: positive regulation of phytol biosynthetic process	2.72E-04
26	GO:0065002: intracellular protein transmembrane transport	2.72E-04
27	GO:0032544: plastid translation	3.23E-04
28	GO:0071482: cellular response to light stimulus	3.23E-04
29	GO:0006783: heme biosynthetic process	3.90E-04
30	GO:0006412: translation	3.97E-04
31	GO:0042254: ribosome biogenesis	4.82E-04
32	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.99E-04
33	GO:0071457: cellular response to ozone	5.99E-04
34	GO:0035304: regulation of protein dephosphorylation	5.99E-04
35	GO:0000256: allantoin catabolic process	5.99E-04
36	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.99E-04
37	GO:0009773: photosynthetic electron transport in photosystem I	6.22E-04
38	GO:0006352: DNA-templated transcription, initiation	6.22E-04
39	GO:0018119: peptidyl-cysteine S-nitrosylation	6.22E-04
40	GO:0009817: defense response to fungus, incompatible interaction	7.33E-04
41	GO:0018298: protein-chromophore linkage	7.33E-04
42	GO:0006518: peptide metabolic process	9.72E-04
43	GO:0010136: ureide catabolic process	9.72E-04
44	GO:0044375: regulation of peroxisome size	9.72E-04
45	GO:0006065: UDP-glucuronate biosynthetic process	9.72E-04
46	GO:0005977: glycogen metabolic process	9.72E-04
47	GO:0009768: photosynthesis, light harvesting in photosystem I	1.37E-03
48	GO:0006145: purine nucleobase catabolic process	1.39E-03
49	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.39E-03
50	GO:0033014: tetrapyrrole biosynthetic process	1.39E-03
51	GO:0010731: protein glutathionylation	1.39E-03
52	GO:1901332: negative regulation of lateral root development	1.39E-03
53	GO:0006986: response to unfolded protein	1.39E-03
54	GO:0010371: regulation of gibberellin biosynthetic process	1.39E-03
55	GO:0071484: cellular response to light intensity	1.39E-03
56	GO:0051085: chaperone mediated protein folding requiring cofactor	1.39E-03
57	GO:0009152: purine ribonucleotide biosynthetic process	1.39E-03
58	GO:0046653: tetrahydrofolate metabolic process	1.39E-03
59	GO:0006536: glutamate metabolic process	1.86E-03
60	GO:0044206: UMP salvage	1.86E-03
61	GO:0071486: cellular response to high light intensity	1.86E-03
62	GO:0009765: photosynthesis, light harvesting	1.86E-03
63	GO:0009658: chloroplast organization	2.28E-03
64	GO:0071493: cellular response to UV-B	2.37E-03
65	GO:0000304: response to singlet oxygen	2.37E-03
66	GO:0080110: sporopollenin biosynthetic process	2.37E-03
67	GO:0019252: starch biosynthetic process	2.82E-03
68	GO:0006655: phosphatidylglycerol biosynthetic process	2.93E-03
69	GO:1901259: chloroplast rRNA processing	3.52E-03
70	GO:0006400: tRNA modification	4.15E-03
71	GO:0005978: glycogen biosynthetic process	4.82E-03
72	GO:0032508: DNA duplex unwinding	4.82E-03
73	GO:0016559: peroxisome fission	4.82E-03
74	GO:0006633: fatty acid biosynthetic process	5.48E-03
75	GO:0019430: removal of superoxide radicals	5.52E-03
76	GO:0006526: arginine biosynthetic process	5.52E-03
77	GO:0019432: triglyceride biosynthetic process	6.25E-03
78	GO:0005982: starch metabolic process	7.03E-03
79	GO:0010205: photoinhibition	7.03E-03
80	GO:0006779: porphyrin-containing compound biosynthetic process	7.03E-03
81	GO:0006782: protoporphyrinogen IX biosynthetic process	7.82E-03
82	GO:0006631: fatty acid metabolic process	8.57E-03
83	GO:0008285: negative regulation of cell proliferation	8.66E-03
84	GO:0019684: photosynthesis, light reaction	8.66E-03
85	GO:0016024: CDP-diacylglycerol biosynthetic process	9.52E-03
86	GO:0009644: response to high light intensity	1.01E-02
87	GO:0006807: nitrogen compound metabolic process	1.04E-02
88	GO:0006094: gluconeogenesis	1.04E-02
89	GO:0009767: photosynthetic electron transport chain	1.04E-02
90	GO:0019253: reductive pentose-phosphate cycle	1.13E-02
91	GO:0009266: response to temperature stimulus	1.13E-02
92	GO:0007031: peroxisome organization	1.23E-02
93	GO:0006364: rRNA processing	1.26E-02
94	GO:0006979: response to oxidative stress	1.28E-02
95	GO:0006636: unsaturated fatty acid biosynthetic process	1.33E-02
96	GO:0019762: glucosinolate catabolic process	1.33E-02
97	GO:0009116: nucleoside metabolic process	1.43E-02
98	GO:0007017: microtubule-based process	1.53E-02
99	GO:0010073: meristem maintenance	1.53E-02
100	GO:0031408: oxylipin biosynthetic process	1.64E-02
101	GO:0003333: amino acid transmembrane transport	1.64E-02
102	GO:0048511: rhythmic process	1.64E-02
103	GO:0035428: hexose transmembrane transport	1.75E-02
104	GO:0016226: iron-sulfur cluster assembly	1.75E-02
105	GO:0080092: regulation of pollen tube growth	1.75E-02
106	GO:0019748: secondary metabolic process	1.75E-02
107	GO:0009625: response to insect	1.86E-02
108	GO:0010227: floral organ abscission	1.86E-02
109	GO:0010584: pollen exine formation	1.97E-02
110	GO:0009409: response to cold	2.13E-02
111	GO:0071472: cellular response to salt stress	2.33E-02
112	GO:0006520: cellular amino acid metabolic process	2.33E-02
113	GO:0046323: glucose import	2.33E-02
114	GO:0009058: biosynthetic process	2.37E-02
115	GO:0006810: transport	2.44E-02
116	GO:0032502: developmental process	2.84E-02
117	GO:0009567: double fertilization forming a zygote and endosperm	3.10E-02
118	GO:0010027: thylakoid membrane organization	3.52E-02
119	GO:0042128: nitrate assimilation	3.80E-02
120	GO:0042742: defense response to bacterium	3.88E-02
121	GO:0006950: response to stress	3.95E-02
122	GO:0010311: lateral root formation	4.40E-02
123	GO:0009813: flavonoid biosynthetic process	4.40E-02
124	GO:0010218: response to far red light	4.55E-02
125	GO:0007568: aging	4.71E-02
126	GO:0006865: amino acid transport	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0090711: FMN hydrolase activity	0.00E+00
2	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
3	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
4	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
5	GO:0008974: phosphoribulokinase activity	0.00E+00
6	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
7	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
8	GO:0046408: chlorophyll synthetase activity	0.00E+00
9	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
10	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
11	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
12	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
13	GO:0019843: rRNA binding	3.12E-08
14	GO:0016851: magnesium chelatase activity	2.76E-05
15	GO:0003735: structural constituent of ribosome	4.12E-05
16	GO:0031072: heat shock protein binding	4.38E-05
17	GO:0001053: plastid sigma factor activity	4.98E-05
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.98E-05
19	GO:0016987: sigma factor activity	4.98E-05
20	GO:0008266: poly(U) RNA binding	5.34E-05
21	GO:0004849: uridine kinase activity	1.58E-04
22	GO:0016491: oxidoreductase activity	1.84E-04
23	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.31E-04
24	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.72E-04
25	GO:0010242: oxygen evolving activity	2.72E-04
26	GO:0004325: ferrochelatase activity	2.72E-04
27	GO:0004853: uroporphyrinogen decarboxylase activity	2.72E-04
28	GO:0005080: protein kinase C binding	2.72E-04
29	GO:0005344: oxygen transporter activity	2.72E-04
30	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	2.72E-04
31	GO:0048038: quinone binding	3.24E-04
32	GO:0051082: unfolded protein binding	5.13E-04
33	GO:0016168: chlorophyll binding	5.62E-04
34	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	5.99E-04
35	GO:0003844: 1,4-alpha-glucan branching enzyme activity	5.99E-04
36	GO:0016630: protochlorophyllide reductase activity	5.99E-04
37	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	5.99E-04
38	GO:0019156: isoamylase activity	5.99E-04
39	GO:0042389: omega-3 fatty acid desaturase activity	5.99E-04
40	GO:0080041: ADP-ribose pyrophosphohydrolase activity	5.99E-04
41	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.99E-04
42	GO:0015173: aromatic amino acid transmembrane transporter activity	5.99E-04
43	GO:0043169: cation binding	9.72E-04
44	GO:0005504: fatty acid binding	9.72E-04
45	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.72E-04
46	GO:0004751: ribose-5-phosphate isomerase activity	9.72E-04
47	GO:0030267: glyoxylate reductase (NADP) activity	9.72E-04
48	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	9.72E-04
49	GO:0008864: formyltetrahydrofolate deformylase activity	9.72E-04
50	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	9.72E-04
51	GO:0003979: UDP-glucose 6-dehydrogenase activity	9.72E-04
52	GO:0031409: pigment binding	1.12E-03
53	GO:0005528: FK506 binding	1.24E-03
54	GO:0043023: ribosomal large subunit binding	1.39E-03
55	GO:0008097: 5S rRNA binding	1.39E-03
56	GO:0004351: glutamate decarboxylase activity	1.39E-03
57	GO:0051287: NAD binding	1.72E-03
58	GO:0043495: protein anchor	1.86E-03
59	GO:0045430: chalcone isomerase activity	1.86E-03
60	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.86E-03
61	GO:0004845: uracil phosphoribosyltransferase activity	1.86E-03
62	GO:0003959: NADPH dehydrogenase activity	2.37E-03
63	GO:0005275: amine transmembrane transporter activity	2.37E-03
64	GO:0008374: O-acyltransferase activity	2.37E-03
65	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.93E-03
66	GO:0004784: superoxide dismutase activity	2.93E-03
67	GO:0004556: alpha-amylase activity	2.93E-03
68	GO:0004332: fructose-bisphosphate aldolase activity	2.93E-03
69	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.52E-03
70	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.52E-03
71	GO:0051920: peroxiredoxin activity	3.52E-03
72	GO:0019899: enzyme binding	4.15E-03
73	GO:0004033: aldo-keto reductase (NADP) activity	4.82E-03
74	GO:0016209: antioxidant activity	4.82E-03
75	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.52E-03
76	GO:0071949: FAD binding	6.25E-03
77	GO:0004222: metalloendopeptidase activity	6.27E-03
78	GO:0003746: translation elongation factor activity	7.20E-03
79	GO:0005089: Rho guanyl-nucleotide exchange factor activity	8.66E-03
80	GO:0051537: 2 iron, 2 sulfur cluster binding	1.01E-02
81	GO:0004565: beta-galactosidase activity	1.04E-02
82	GO:0004601: peroxidase activity	1.08E-02
83	GO:0005509: calcium ion binding	1.10E-02
84	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.26E-02
85	GO:0051536: iron-sulfur cluster binding	1.43E-02
86	GO:0051087: chaperone binding	1.53E-02
87	GO:0016787: hydrolase activity	1.72E-02
88	GO:0022891: substrate-specific transmembrane transporter activity	1.86E-02
89	GO:0003756: protein disulfide isomerase activity	1.97E-02
90	GO:0008080: N-acetyltransferase activity	2.33E-02
91	GO:0005355: glucose transmembrane transporter activity	2.45E-02
92	GO:0050662: coenzyme binding	2.45E-02
93	GO:0020037: heme binding	2.75E-02
94	GO:0005200: structural constituent of cytoskeleton	3.24E-02
95	GO:0042802: identical protein binding	3.93E-02
96	GO:0016887: ATPase activity	4.00E-02
97	GO:0003824: catalytic activity	4.43E-02
98	GO:0008168: methyltransferase activity	4.60E-02