GO Enrichment Analysis of Co-expressed Genes with
AT5G52940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 2 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 3 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 4 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 5 | GO:0006518: peptide metabolic process | 5.99E-06 |
| 6 | GO:0009913: epidermal cell differentiation | 6.12E-05 |
| 7 | GO:0042793: transcription from plastid promoter | 6.12E-05 |
| 8 | GO:1901259: chloroplast rRNA processing | 8.53E-05 |
| 9 | GO:0046620: regulation of organ growth | 1.45E-04 |
| 10 | GO:0010063: positive regulation of trichoblast fate specification | 1.84E-04 |
| 11 | GO:0035987: endodermal cell differentiation | 1.84E-04 |
| 12 | GO:0042659: regulation of cell fate specification | 1.84E-04 |
| 13 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.84E-04 |
| 14 | GO:0090558: plant epidermis development | 1.84E-04 |
| 15 | GO:1900865: chloroplast RNA modification | 2.64E-04 |
| 16 | GO:0018026: peptidyl-lysine monomethylation | 4.15E-04 |
| 17 | GO:0009662: etioplast organization | 4.15E-04 |
| 18 | GO:1900033: negative regulation of trichome patterning | 4.15E-04 |
| 19 | GO:1904143: positive regulation of carotenoid biosynthetic process | 4.15E-04 |
| 20 | GO:0080009: mRNA methylation | 4.15E-04 |
| 21 | GO:0006420: arginyl-tRNA aminoacylation | 4.15E-04 |
| 22 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.15E-04 |
| 23 | GO:0090708: specification of plant organ axis polarity | 6.76E-04 |
| 24 | GO:0009734: auxin-activated signaling pathway | 9.19E-04 |
| 25 | GO:0010306: rhamnogalacturonan II biosynthetic process | 9.65E-04 |
| 26 | GO:0010071: root meristem specification | 9.65E-04 |
| 27 | GO:0010239: chloroplast mRNA processing | 9.65E-04 |
| 28 | GO:0016556: mRNA modification | 9.65E-04 |
| 29 | GO:0030104: water homeostasis | 1.28E-03 |
| 30 | GO:0006479: protein methylation | 1.28E-03 |
| 31 | GO:0048629: trichome patterning | 1.28E-03 |
| 32 | GO:0051322: anaphase | 1.28E-03 |
| 33 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.28E-03 |
| 34 | GO:0010305: leaf vascular tissue pattern formation | 1.41E-03 |
| 35 | GO:0048825: cotyledon development | 1.63E-03 |
| 36 | GO:0048497: maintenance of floral organ identity | 1.63E-03 |
| 37 | GO:0009107: lipoate biosynthetic process | 1.63E-03 |
| 38 | GO:0010583: response to cyclopentenone | 1.85E-03 |
| 39 | GO:1902456: regulation of stomatal opening | 2.01E-03 |
| 40 | GO:0006014: D-ribose metabolic process | 2.01E-03 |
| 41 | GO:0016554: cytidine to uridine editing | 2.01E-03 |
| 42 | GO:0009828: plant-type cell wall loosening | 2.10E-03 |
| 43 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.41E-03 |
| 44 | GO:0006458: 'de novo' protein folding | 2.41E-03 |
| 45 | GO:0009942: longitudinal axis specification | 2.41E-03 |
| 46 | GO:2000067: regulation of root morphogenesis | 2.41E-03 |
| 47 | GO:0042026: protein refolding | 2.41E-03 |
| 48 | GO:0015937: coenzyme A biosynthetic process | 2.83E-03 |
| 49 | GO:0048528: post-embryonic root development | 2.83E-03 |
| 50 | GO:0048437: floral organ development | 2.83E-03 |
| 51 | GO:0055075: potassium ion homeostasis | 3.28E-03 |
| 52 | GO:0019430: removal of superoxide radicals | 3.75E-03 |
| 53 | GO:0007389: pattern specification process | 3.75E-03 |
| 54 | GO:0000902: cell morphogenesis | 4.25E-03 |
| 55 | GO:2000280: regulation of root development | 4.76E-03 |
| 56 | GO:0031425: chloroplast RNA processing | 4.76E-03 |
| 57 | GO:0009658: chloroplast organization | 5.27E-03 |
| 58 | GO:0006535: cysteine biosynthetic process from serine | 5.30E-03 |
| 59 | GO:0009926: auxin polar transport | 5.30E-03 |
| 60 | GO:0006949: syncytium formation | 5.30E-03 |
| 61 | GO:0009733: response to auxin | 5.79E-03 |
| 62 | GO:0009416: response to light stimulus | 5.81E-03 |
| 63 | GO:0009750: response to fructose | 5.85E-03 |
| 64 | GO:0009664: plant-type cell wall organization | 6.65E-03 |
| 65 | GO:0030048: actin filament-based movement | 7.03E-03 |
| 66 | GO:0010588: cotyledon vascular tissue pattern formation | 7.03E-03 |
| 67 | GO:0009691: cytokinin biosynthetic process | 7.03E-03 |
| 68 | GO:0006364: rRNA processing | 7.14E-03 |
| 69 | GO:0048367: shoot system development | 8.72E-03 |
| 70 | GO:0006833: water transport | 8.93E-03 |
| 71 | GO:0080147: root hair cell development | 9.60E-03 |
| 72 | GO:0019344: cysteine biosynthetic process | 9.60E-03 |
| 73 | GO:0010073: meristem maintenance | 1.03E-02 |
| 74 | GO:0051302: regulation of cell division | 1.03E-02 |
| 75 | GO:0019953: sexual reproduction | 1.03E-02 |
| 76 | GO:0015992: proton transport | 1.10E-02 |
| 77 | GO:0061077: chaperone-mediated protein folding | 1.10E-02 |
| 78 | GO:0016226: iron-sulfur cluster assembly | 1.17E-02 |
| 79 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.25E-02 |
| 80 | GO:0042127: regulation of cell proliferation | 1.32E-02 |
| 81 | GO:0009845: seed germination | 1.38E-02 |
| 82 | GO:0080022: primary root development | 1.48E-02 |
| 83 | GO:0008033: tRNA processing | 1.48E-02 |
| 84 | GO:0010087: phloem or xylem histogenesis | 1.48E-02 |
| 85 | GO:0010118: stomatal movement | 1.48E-02 |
| 86 | GO:0000226: microtubule cytoskeleton organization | 1.48E-02 |
| 87 | GO:0007275: multicellular organism development | 1.53E-02 |
| 88 | GO:0048868: pollen tube development | 1.56E-02 |
| 89 | GO:0009741: response to brassinosteroid | 1.56E-02 |
| 90 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 1.62E-02 |
| 91 | GO:0048544: recognition of pollen | 1.64E-02 |
| 92 | GO:0007018: microtubule-based movement | 1.64E-02 |
| 93 | GO:0009646: response to absence of light | 1.64E-02 |
| 94 | GO:0040008: regulation of growth | 1.68E-02 |
| 95 | GO:0009749: response to glucose | 1.73E-02 |
| 96 | GO:0019252: starch biosynthetic process | 1.73E-02 |
| 97 | GO:0009851: auxin biosynthetic process | 1.73E-02 |
| 98 | GO:0045490: pectin catabolic process | 1.76E-02 |
| 99 | GO:0071554: cell wall organization or biogenesis | 1.81E-02 |
| 100 | GO:0019761: glucosinolate biosynthetic process | 1.90E-02 |
| 101 | GO:0032502: developmental process | 1.90E-02 |
| 102 | GO:0006464: cellular protein modification process | 2.07E-02 |
| 103 | GO:0010252: auxin homeostasis | 2.07E-02 |
| 104 | GO:0000910: cytokinesis | 2.26E-02 |
| 105 | GO:0010027: thylakoid membrane organization | 2.35E-02 |
| 106 | GO:0009826: unidimensional cell growth | 2.63E-02 |
| 107 | GO:0048481: plant ovule development | 2.84E-02 |
| 108 | GO:0009860: pollen tube growth | 2.94E-02 |
| 109 | GO:0000160: phosphorelay signal transduction system | 2.94E-02 |
| 110 | GO:0005975: carbohydrate metabolic process | 3.13E-02 |
| 111 | GO:0006457: protein folding | 3.24E-02 |
| 112 | GO:0006508: proteolysis | 3.25E-02 |
| 113 | GO:0008283: cell proliferation | 4.03E-02 |
| 114 | GO:0009744: response to sucrose | 4.03E-02 |
| 115 | GO:0006355: regulation of transcription, DNA-templated | 4.68E-02 |
| 116 | GO:0009736: cytokinin-activated signaling pathway | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0016274: protein-arginine N-methyltransferase activity | 1.84E-04 |
| 3 | GO:0004632: phosphopantothenate--cysteine ligase activity | 1.84E-04 |
| 4 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.84E-04 |
| 5 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.84E-04 |
| 6 | GO:0052381: tRNA dimethylallyltransferase activity | 1.84E-04 |
| 7 | GO:0017118: lipoyltransferase activity | 4.15E-04 |
| 8 | GO:0004814: arginine-tRNA ligase activity | 4.15E-04 |
| 9 | GO:0016415: octanoyltransferase activity | 4.15E-04 |
| 10 | GO:0004047: aminomethyltransferase activity | 4.15E-04 |
| 11 | GO:0000774: adenyl-nucleotide exchange factor activity | 4.15E-04 |
| 12 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 4.15E-04 |
| 13 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.30E-04 |
| 14 | GO:0016805: dipeptidase activity | 6.76E-04 |
| 15 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 9.65E-04 |
| 16 | GO:0001872: (1->3)-beta-D-glucan binding | 9.65E-04 |
| 17 | GO:0009041: uridylate kinase activity | 9.65E-04 |
| 18 | GO:0030570: pectate lyase activity | 1.04E-03 |
| 19 | GO:0016279: protein-lysine N-methyltransferase activity | 1.28E-03 |
| 20 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.63E-03 |
| 21 | GO:0004784: superoxide dismutase activity | 2.01E-03 |
| 22 | GO:0004124: cysteine synthase activity | 2.41E-03 |
| 23 | GO:0004747: ribokinase activity | 2.41E-03 |
| 24 | GO:0004427: inorganic diphosphatase activity | 2.83E-03 |
| 25 | GO:0008865: fructokinase activity | 3.28E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 3.59E-03 |
| 27 | GO:0008173: RNA methyltransferase activity | 3.75E-03 |
| 28 | GO:0009672: auxin:proton symporter activity | 4.76E-03 |
| 29 | GO:0044183: protein binding involved in protein folding | 5.85E-03 |
| 30 | GO:0010329: auxin efflux transmembrane transporter activity | 7.03E-03 |
| 31 | GO:0003774: motor activity | 7.64E-03 |
| 32 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 8.71E-03 |
| 33 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.84E-03 |
| 34 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 9.98E-03 |
| 35 | GO:0051082: unfolded protein binding | 1.02E-02 |
| 36 | GO:0051087: chaperone binding | 1.03E-02 |
| 37 | GO:0008408: 3'-5' exonuclease activity | 1.10E-02 |
| 38 | GO:0003723: RNA binding | 1.15E-02 |
| 39 | GO:0004519: endonuclease activity | 1.26E-02 |
| 40 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.45E-02 |
| 41 | GO:0004527: exonuclease activity | 1.56E-02 |
| 42 | GO:0001085: RNA polymerase II transcription factor binding | 1.56E-02 |
| 43 | GO:0004518: nuclease activity | 1.90E-02 |
| 44 | GO:0000156: phosphorelay response regulator activity | 1.99E-02 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 2.17E-02 |
| 46 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.17E-02 |
| 47 | GO:0008237: metallopeptidase activity | 2.17E-02 |
| 48 | GO:0016413: O-acetyltransferase activity | 2.26E-02 |
| 49 | GO:0051213: dioxygenase activity | 2.35E-02 |
| 50 | GO:0008168: methyltransferase activity | 2.63E-02 |
| 51 | GO:0030247: polysaccharide binding | 2.64E-02 |
| 52 | GO:0005096: GTPase activator activity | 2.94E-02 |
| 53 | GO:0043565: sequence-specific DNA binding | 3.03E-02 |
| 54 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.15E-02 |
| 55 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.36E-02 |
| 56 | GO:0003993: acid phosphatase activity | 3.47E-02 |
| 57 | GO:0046872: metal ion binding | 4.90E-02 |