Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G51545

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002184: cytoplasmic translational termination0.00E+00
2GO:0017038: protein import0.00E+00
3GO:0046460: neutral lipid biosynthetic process0.00E+00
4GO:0031054: pre-miRNA processing0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:0090279: regulation of calcium ion import0.00E+00
7GO:0031116: positive regulation of microtubule polymerization0.00E+00
8GO:0090470: shoot organ boundary specification0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
11GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
12GO:0042821: pyridoxal biosynthetic process0.00E+00
13GO:0042407: cristae formation0.00E+00
14GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
15GO:0009106: lipoate metabolic process0.00E+00
16GO:0090042: tubulin deacetylation0.00E+00
17GO:0071474: cellular hyperosmotic response0.00E+00
18GO:0006114: glycerol biosynthetic process0.00E+00
19GO:0018023: peptidyl-lysine trimethylation0.00E+00
20GO:1902458: positive regulation of stomatal opening0.00E+00
21GO:0070125: mitochondrial translational elongation0.00E+00
22GO:0006429: leucyl-tRNA aminoacylation0.00E+00
23GO:0009249: protein lipoylation0.00E+00
24GO:0019685: photosynthesis, dark reaction0.00E+00
25GO:0043488: regulation of mRNA stability0.00E+00
26GO:0071482: cellular response to light stimulus2.03E-06
27GO:0045038: protein import into chloroplast thylakoid membrane7.75E-06
28GO:1903426: regulation of reactive oxygen species biosynthetic process1.88E-05
29GO:0010207: photosystem II assembly2.28E-05
30GO:0010027: thylakoid membrane organization5.14E-05
31GO:0009658: chloroplast organization7.05E-05
32GO:0015995: chlorophyll biosynthetic process7.45E-05
33GO:0032544: plastid translation7.57E-05
34GO:2001141: regulation of RNA biosynthetic process1.28E-04
35GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.28E-04
36GO:0006352: DNA-templated transcription, initiation2.06E-04
37GO:0006415: translational termination2.06E-04
38GO:0045037: protein import into chloroplast stroma2.51E-04
39GO:0032543: mitochondrial translation3.29E-04
40GO:0010190: cytochrome b6f complex assembly4.58E-04
41GO:0030488: tRNA methylation6.07E-04
42GO:0000476: maturation of 4.5S rRNA6.60E-04
43GO:0009443: pyridoxal 5'-phosphate salvage6.60E-04
44GO:0000967: rRNA 5'-end processing6.60E-04
45GO:0015671: oxygen transport6.60E-04
46GO:0000481: maturation of 5S rRNA6.60E-04
47GO:0006659: phosphatidylserine biosynthetic process6.60E-04
48GO:0042547: cell wall modification involved in multidimensional cell growth6.60E-04
49GO:0015801: aromatic amino acid transport6.60E-04
50GO:0034337: RNA folding6.60E-04
51GO:0006747: FAD biosynthetic process6.60E-04
52GO:0009395: phospholipid catabolic process7.76E-04
53GO:0006605: protein targeting9.63E-04
54GO:2000070: regulation of response to water deprivation9.63E-04
55GO:0010206: photosystem II repair1.40E-03
56GO:0019432: triglyceride biosynthetic process1.40E-03
57GO:0010198: synergid death1.42E-03
58GO:0010115: regulation of abscisic acid biosynthetic process1.42E-03
59GO:1900871: chloroplast mRNA modification1.42E-03
60GO:0030187: melatonin biosynthetic process1.42E-03
61GO:0006432: phenylalanyl-tRNA aminoacylation1.42E-03
62GO:0018026: peptidyl-lysine monomethylation1.42E-03
63GO:0000256: allantoin catabolic process1.42E-03
64GO:0090342: regulation of cell aging1.42E-03
65GO:1900033: negative regulation of trichome patterning1.42E-03
66GO:0034755: iron ion transmembrane transport1.42E-03
67GO:0006423: cysteinyl-tRNA aminoacylation1.42E-03
68GO:0006435: threonyl-tRNA aminoacylation1.42E-03
69GO:0051262: protein tetramerization1.42E-03
70GO:0034470: ncRNA processing1.42E-03
71GO:1900865: chloroplast RNA modification1.66E-03
72GO:0006782: protoporphyrinogen IX biosynthetic process1.94E-03
73GO:0009089: lysine biosynthetic process via diaminopimelate2.25E-03
74GO:0009684: indoleacetic acid biosynthetic process2.25E-03
75GO:0033591: response to L-ascorbic acid2.35E-03
76GO:0010136: ureide catabolic process2.35E-03
77GO:0010589: leaf proximal/distal pattern formation2.35E-03
78GO:0009405: pathogenesis2.35E-03
79GO:0051604: protein maturation2.35E-03
80GO:0015940: pantothenate biosynthetic process2.35E-03
81GO:0001578: microtubule bundle formation2.35E-03
82GO:0045493: xylan catabolic process2.35E-03
83GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition2.35E-03
84GO:0016024: CDP-diacylglycerol biosynthetic process2.58E-03
85GO:0009627: systemic acquired resistance3.20E-03
86GO:0010143: cutin biosynthetic process3.32E-03
87GO:0046653: tetrahydrofolate metabolic process3.41E-03
88GO:0006424: glutamyl-tRNA aminoacylation3.41E-03
89GO:0046739: transport of virus in multicellular host3.41E-03
90GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.41E-03
91GO:0006145: purine nucleobase catabolic process3.41E-03
92GO:0006168: adenine salvage3.41E-03
93GO:0010371: regulation of gibberellin biosynthetic process3.41E-03
94GO:0006166: purine ribonucleoside salvage3.41E-03
95GO:0009102: biotin biosynthetic process3.41E-03
96GO:0000162: tryptophan biosynthetic process4.16E-03
97GO:0051322: anaphase4.60E-03
98GO:0009765: photosynthesis, light harvesting4.60E-03
99GO:0035279: mRNA cleavage involved in gene silencing by miRNA4.60E-03
100GO:0022622: root system development4.60E-03
101GO:0006021: inositol biosynthetic process4.60E-03
102GO:0071483: cellular response to blue light4.60E-03
103GO:0007020: microtubule nucleation4.60E-03
104GO:0048629: trichome patterning4.60E-03
105GO:0010109: regulation of photosynthesis4.60E-03
106GO:0006418: tRNA aminoacylation for protein translation5.10E-03
107GO:0048511: rhythmic process5.61E-03
108GO:0000304: response to singlet oxygen5.92E-03
109GO:0080110: sporopollenin biosynthetic process5.92E-03
110GO:0046785: microtubule polymerization5.92E-03
111GO:0046907: intracellular transport5.92E-03
112GO:0016120: carotene biosynthetic process5.92E-03
113GO:0009107: lipoate biosynthetic process5.92E-03
114GO:0016123: xanthophyll biosynthetic process5.92E-03
115GO:0044209: AMP salvage5.92E-03
116GO:0009306: protein secretion7.31E-03
117GO:0006655: phosphatidylglycerol biosynthetic process7.35E-03
118GO:0016554: cytidine to uridine editing7.35E-03
119GO:0032973: amino acid export7.35E-03
120GO:0042549: photosystem II stabilization7.35E-03
121GO:0010264: myo-inositol hexakisphosphate biosynthetic process7.35E-03
122GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway7.35E-03
123GO:0006413: translational initiation8.06E-03
124GO:0009955: adaxial/abaxial pattern specification8.89E-03
125GO:0034389: lipid particle organization8.89E-03
126GO:1901259: chloroplast rRNA processing8.89E-03
127GO:0009648: photoperiodism8.89E-03
128GO:0010310: regulation of hydrogen peroxide metabolic process8.89E-03
129GO:0015979: photosynthesis9.02E-03
130GO:0009958: positive gravitropism9.27E-03
131GO:0043090: amino acid import1.05E-02
132GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.05E-02
133GO:0035196: production of miRNAs involved in gene silencing by miRNA1.05E-02
134GO:0032880: regulation of protein localization1.05E-02
135GO:0048528: post-embryonic root development1.05E-02
136GO:0009735: response to cytokinin1.14E-02
137GO:0048564: photosystem I assembly1.23E-02
138GO:0016032: viral process1.23E-02
139GO:0010078: maintenance of root meristem identity1.23E-02
140GO:0032508: DNA duplex unwinding1.23E-02
141GO:0006875: cellular metal ion homeostasis1.23E-02
142GO:0000105: histidine biosynthetic process1.23E-02
143GO:0009231: riboflavin biosynthetic process1.23E-02
144GO:0052543: callose deposition in cell wall1.23E-02
145GO:0022900: electron transport chain1.41E-02
146GO:0015996: chlorophyll catabolic process1.41E-02
147GO:0007186: G-protein coupled receptor signaling pathway1.41E-02
148GO:0009657: plastid organization1.41E-02
149GO:0043562: cellular response to nitrogen levels1.41E-02
150GO:0017004: cytochrome complex assembly1.41E-02
151GO:0009821: alkaloid biosynthetic process1.61E-02
152GO:0080144: amino acid homeostasis1.61E-02
153GO:0006783: heme biosynthetic process1.61E-02
154GO:0010267: production of ta-siRNAs involved in RNA interference1.81E-02
155GO:0043067: regulation of programmed cell death1.81E-02
156GO:0006779: porphyrin-containing compound biosynthetic process1.81E-02
157GO:0005982: starch metabolic process1.81E-02
158GO:0006949: syncytium formation2.02E-02
159GO:0010629: negative regulation of gene expression2.02E-02
160GO:0016311: dephosphorylation2.07E-02
161GO:0019684: photosynthesis, light reaction2.24E-02
162GO:0009773: photosynthetic electron transport in photosystem I2.24E-02
163GO:1903507: negative regulation of nucleic acid-templated transcription2.24E-02
164GO:0006879: cellular iron ion homeostasis2.24E-02
165GO:0008285: negative regulation of cell proliferation2.24E-02
166GO:0018119: peptidyl-cysteine S-nitrosylation2.24E-02
167GO:0006508: proteolysis2.45E-02
168GO:0005983: starch catabolic process2.47E-02
169GO:0048527: lateral root development2.53E-02
170GO:0007568: aging2.53E-02
171GO:0009793: embryo development ending in seed dormancy2.59E-02
172GO:0010588: cotyledon vascular tissue pattern formation2.70E-02
173GO:2000012: regulation of auxin polar transport2.70E-02
174GO:0009725: response to hormone2.70E-02
175GO:0045087: innate immune response2.77E-02
176GO:0048467: gynoecium development2.95E-02
177GO:0006541: glutamine metabolic process2.95E-02
178GO:0019853: L-ascorbic acid biosynthetic process3.20E-02
179GO:0071732: cellular response to nitric oxide3.20E-02
180GO:0090351: seedling development3.20E-02
181GO:0006631: fatty acid metabolic process3.29E-02
182GO:0015031: protein transport3.46E-02
183GO:0006071: glycerol metabolic process3.46E-02
184GO:0006833: water transport3.46E-02
185GO:0007010: cytoskeleton organization3.72E-02
186GO:0016575: histone deacetylation3.99E-02
187GO:0043622: cortical microtubule organization3.99E-02
188GO:0007017: microtubule-based process3.99E-02
189GO:0010073: meristem maintenance3.99E-02
190GO:0016042: lipid catabolic process4.07E-02
191GO:0006855: drug transmembrane transport4.16E-02
192GO:0061077: chaperone-mediated protein folding4.27E-02
193GO:0031408: oxylipin biosynthetic process4.27E-02
194GO:0003333: amino acid transmembrane transport4.27E-02
195GO:0016998: cell wall macromolecule catabolic process4.27E-02
196GO:0009664: plant-type cell wall organization4.47E-02
197GO:0009814: defense response, incompatible interaction4.55E-02
198GO:2000022: regulation of jasmonic acid mediated signaling pathway4.55E-02
199GO:0031348: negative regulation of defense response4.55E-02
200GO:0080092: regulation of pollen tube growth4.55E-02
201GO:0019748: secondary metabolic process4.55E-02
202GO:0006412: translation4.74E-02
203GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.84E-02
204GO:0071369: cellular response to ethylene stimulus4.84E-02
205GO:0010227: floral organ abscission4.84E-02
206GO:0006012: galactose metabolic process4.84E-02
RankGO TermAdjusted P value
1GO:0019144: ADP-sugar diphosphatase activity0.00E+00
2GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
3GO:0043864: indoleacetamide hydrolase activity0.00E+00
4GO:0010349: L-galactose dehydrogenase activity0.00E+00
5GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
6GO:0008115: sarcosine oxidase activity0.00E+00
7GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
8GO:0050613: delta14-sterol reductase activity0.00E+00
9GO:0043014: alpha-tubulin binding0.00E+00
10GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
11GO:0071522: ureidoglycine aminohydrolase activity0.00E+00
12GO:0051721: protein phosphatase 2A binding0.00E+00
13GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
14GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
15GO:0042903: tubulin deacetylase activity0.00E+00
16GO:0004823: leucine-tRNA ligase activity0.00E+00
17GO:0003858: 3-hydroxybutyrate dehydrogenase activity0.00E+00
18GO:0045435: lycopene epsilon cyclase activity0.00E+00
19GO:0004822: isoleucine-tRNA ligase activity0.00E+00
20GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
21GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
22GO:0005048: signal sequence binding0.00E+00
23GO:0004076: biotin synthase activity0.00E+00
24GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
25GO:0043136: glycerol-3-phosphatase activity0.00E+00
26GO:0000121: glycerol-1-phosphatase activity0.00E+00
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.85E-08
28GO:0016851: magnesium chelatase activity1.25E-06
29GO:0005528: FK506 binding1.93E-06
30GO:0016987: sigma factor activity3.54E-06
31GO:0001053: plastid sigma factor activity3.54E-06
32GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase1.88E-05
33GO:0002161: aminoacyl-tRNA editing activity6.14E-05
34GO:0030267: glyoxylate reductase (NADP) activity6.14E-05
35GO:0070402: NADPH binding6.14E-05
36GO:0016788: hydrolase activity, acting on ester bonds7.46E-05
37GO:0003747: translation release factor activity1.01E-04
38GO:0016149: translation release factor activity, codon specific1.28E-04
39GO:0004040: amidase activity3.29E-04
40GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.58E-04
41GO:2001070: starch binding4.58E-04
42GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity6.07E-04
43GO:0008236: serine-type peptidase activity6.23E-04
44GO:0005227: calcium activated cation channel activity6.60E-04
45GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity6.60E-04
46GO:0004856: xylulokinase activity6.60E-04
47GO:0009496: plastoquinol--plastocyanin reductase activity6.60E-04
48GO:0080042: ADP-glucose pyrophosphohydrolase activity6.60E-04
49GO:0019203: carbohydrate phosphatase activity6.60E-04
50GO:0050308: sugar-phosphatase activity6.60E-04
51GO:0005080: protein kinase C binding6.60E-04
52GO:0015088: copper uptake transmembrane transporter activity6.60E-04
53GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity6.60E-04
54GO:0004853: uroporphyrinogen decarboxylase activity6.60E-04
55GO:0016784: 3-mercaptopyruvate sulfurtransferase activity6.60E-04
56GO:0005344: oxygen transporter activity6.60E-04
57GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity6.60E-04
58GO:0004033: aldo-keto reductase (NADP) activity9.63E-04
59GO:0003993: acid phosphatase activity1.04E-03
60GO:0015173: aromatic amino acid transmembrane transporter activity1.42E-03
61GO:0004817: cysteine-tRNA ligase activity1.42E-03
62GO:0080097: L-tryptophan:pyruvate aminotransferase activity1.42E-03
63GO:0004829: threonine-tRNA ligase activity1.42E-03
64GO:0003919: FMN adenylyltransferase activity1.42E-03
65GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.42E-03
66GO:0004826: phenylalanine-tRNA ligase activity1.42E-03
67GO:0004512: inositol-3-phosphate synthase activity1.42E-03
68GO:0017118: lipoyltransferase activity1.42E-03
69GO:0080041: ADP-ribose pyrophosphohydrolase activity1.42E-03
70GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity1.42E-03
71GO:0009977: proton motive force dependent protein transmembrane transporter activity1.42E-03
72GO:0016415: octanoyltransferase activity1.42E-03
73GO:0005381: iron ion transmembrane transporter activity1.66E-03
74GO:0005504: fatty acid binding2.35E-03
75GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.35E-03
76GO:0003913: DNA photolyase activity2.35E-03
77GO:0004049: anthranilate synthase activity2.35E-03
78GO:0015462: ATPase-coupled protein transmembrane transporter activity2.35E-03
79GO:0004180: carboxypeptidase activity2.35E-03
80GO:0000049: tRNA binding2.58E-03
81GO:0031072: heat shock protein binding2.94E-03
82GO:0003999: adenine phosphoribosyltransferase activity3.41E-03
83GO:0048487: beta-tubulin binding3.41E-03
84GO:0004792: thiosulfate sulfurtransferase activity3.41E-03
85GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor3.41E-03
86GO:0043023: ribosomal large subunit binding3.41E-03
87GO:0035198: miRNA binding3.41E-03
88GO:0001872: (1->3)-beta-D-glucan binding3.41E-03
89GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds4.60E-03
90GO:0004045: aminoacyl-tRNA hydrolase activity4.60E-03
91GO:0045430: chalcone isomerase activity4.60E-03
92GO:0009044: xylan 1,4-beta-xylosidase activity4.60E-03
93GO:0046556: alpha-L-arabinofuranosidase activity4.60E-03
94GO:0016279: protein-lysine N-methyltransferase activity4.60E-03
95GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.60E-03
96GO:0016846: carbon-sulfur lyase activity5.92E-03
97GO:0005275: amine transmembrane transporter activity5.92E-03
98GO:0016773: phosphotransferase activity, alcohol group as acceptor5.92E-03
99GO:0016491: oxidoreductase activity6.50E-03
100GO:0030570: pectate lyase activity6.72E-03
101GO:0042578: phosphoric ester hydrolase activity7.35E-03
102GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.35E-03
103GO:0004812: aminoacyl-tRNA ligase activity7.94E-03
104GO:0003730: mRNA 3'-UTR binding8.89E-03
105GO:0004144: diacylglycerol O-acyltransferase activity8.89E-03
106GO:0004723: calcium-dependent protein serine/threonine phosphatase activity8.89E-03
107GO:0005261: cation channel activity8.89E-03
108GO:0051920: peroxiredoxin activity8.89E-03
109GO:0008080: N-acetyltransferase activity9.27E-03
110GO:0016787: hydrolase activity9.63E-03
111GO:0009881: photoreceptor activity1.05E-02
112GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.08E-02
113GO:0003743: translation initiation factor activity1.14E-02
114GO:0048038: quinone binding1.15E-02
115GO:0008312: 7S RNA binding1.23E-02
116GO:0043022: ribosome binding1.23E-02
117GO:0016209: antioxidant activity1.23E-02
118GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.41E-02
119GO:0008173: RNA methyltransferase activity1.41E-02
120GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.61E-02
121GO:0016844: strictosidine synthase activity1.81E-02
122GO:0005089: Rho guanyl-nucleotide exchange factor activity2.24E-02
123GO:0047372: acylglycerol lipase activity2.24E-02
124GO:0019843: rRNA binding2.25E-02
125GO:0003723: RNA binding2.26E-02
126GO:0004222: metalloendopeptidase activity2.41E-02
127GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.53E-02
128GO:0003725: double-stranded RNA binding2.70E-02
129GO:0004022: alcohol dehydrogenase (NAD) activity2.70E-02
130GO:0003746: translation elongation factor activity2.77E-02
131GO:0052689: carboxylic ester hydrolase activity2.78E-02
132GO:0008083: growth factor activity2.95E-02
133GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.95E-02
134GO:0008266: poly(U) RNA binding2.95E-02
135GO:0005525: GTP binding3.47E-02
136GO:0008017: microtubule binding3.56E-02
137GO:0004185: serine-type carboxypeptidase activity3.57E-02
138GO:0004407: histone deacetylase activity3.72E-02
139GO:0003714: transcription corepressor activity3.72E-02
140GO:0051536: iron-sulfur cluster binding3.72E-02
141GO:0004857: enzyme inhibitor activity3.72E-02
142GO:0051537: 2 iron, 2 sulfur cluster binding3.86E-02
143GO:0003735: structural constituent of ribosome3.95E-02
144GO:0051087: chaperone binding3.99E-02
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Gene type



Gene DE type