Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G50860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033231: carbohydrate export0.00E+00
2GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
3GO:0005996: monosaccharide metabolic process0.00E+00
4GO:0006573: valine metabolic process0.00E+00
5GO:0046471: phosphatidylglycerol metabolic process0.00E+00
6GO:0015717: triose phosphate transport0.00E+00
7GO:1905157: positive regulation of photosynthesis0.00E+00
8GO:1901918: negative regulation of exoribonuclease activity0.00E+00
9GO:0006636: unsaturated fatty acid biosynthetic process1.60E-05
10GO:0009643: photosynthetic acclimation3.71E-05
11GO:0015755: fructose transport1.35E-04
12GO:0051180: vitamin transport1.35E-04
13GO:0030974: thiamine pyrophosphate transport1.35E-04
14GO:0046467: membrane lipid biosynthetic process1.35E-04
15GO:0046900: tetrahydrofolylpolyglutamate metabolic process1.35E-04
16GO:0071277: cellular response to calcium ion1.35E-04
17GO:1904966: positive regulation of vitamin E biosynthetic process1.35E-04
18GO:1904964: positive regulation of phytol biosynthetic process1.35E-04
19GO:0006551: leucine metabolic process1.35E-04
20GO:0042371: vitamin K biosynthetic process1.35E-04
21GO:0043007: maintenance of rDNA1.35E-04
22GO:0019510: S-adenosylhomocysteine catabolic process1.35E-04
23GO:1902334: fructose export from vacuole to cytoplasm1.35E-04
24GO:0055114: oxidation-reduction process2.94E-04
25GO:0034599: cellular response to oxidative stress2.98E-04
26GO:0006094: gluconeogenesis3.08E-04
27GO:1902326: positive regulation of chlorophyll biosynthetic process3.11E-04
28GO:0033353: S-adenosylmethionine cycle3.11E-04
29GO:0015893: drug transport3.11E-04
30GO:0030388: fructose 1,6-bisphosphate metabolic process3.11E-04
31GO:0010207: photosystem II assembly3.49E-04
32GO:0019253: reductive pentose-phosphate cycle3.49E-04
33GO:0006000: fructose metabolic process5.13E-04
34GO:0035436: triose phosphate transmembrane transport5.13E-04
35GO:0006696: ergosterol biosynthetic process5.13E-04
36GO:0042823: pyridoxal phosphate biosynthetic process7.34E-04
37GO:0071484: cellular response to light intensity7.34E-04
38GO:0006662: glycerol ether metabolic process9.40E-04
39GO:0045727: positive regulation of translation9.73E-04
40GO:0031122: cytoplasmic microtubule organization9.73E-04
41GO:0006546: glycine catabolic process9.73E-04
42GO:0015713: phosphoglycerate transport9.73E-04
43GO:0015976: carbon utilization9.73E-04
44GO:0015689: molybdate ion transport9.73E-04
45GO:0009765: photosynthesis, light harvesting9.73E-04
46GO:0032259: methylation1.18E-03
47GO:0035434: copper ion transmembrane transport1.23E-03
48GO:0016123: xanthophyll biosynthetic process1.23E-03
49GO:0010190: cytochrome b6f complex assembly1.51E-03
50GO:0007623: circadian rhythm1.76E-03
51GO:0009082: branched-chain amino acid biosynthetic process1.81E-03
52GO:0017148: negative regulation of translation1.81E-03
53GO:0009099: valine biosynthetic process1.81E-03
54GO:0009854: oxidative photosynthetic carbon pathway1.81E-03
55GO:0010019: chloroplast-nucleus signaling pathway1.81E-03
56GO:0015995: chlorophyll biosynthetic process1.93E-03
57GO:0009772: photosynthetic electron transport in photosystem II2.12E-03
58GO:1900056: negative regulation of leaf senescence2.12E-03
59GO:0019827: stem cell population maintenance2.46E-03
60GO:0008610: lipid biosynthetic process2.46E-03
61GO:0005978: glycogen biosynthetic process2.46E-03
62GO:0009704: de-etiolation2.46E-03
63GO:0009231: riboflavin biosynthetic process2.46E-03
64GO:0009657: plastid organization2.81E-03
65GO:0009097: isoleucine biosynthetic process2.81E-03
66GO:0032544: plastid translation2.81E-03
67GO:2000031: regulation of salicylic acid mediated signaling pathway2.81E-03
68GO:0009932: cell tip growth2.81E-03
69GO:0006002: fructose 6-phosphate metabolic process2.81E-03
70GO:0009658: chloroplast organization3.06E-03
71GO:0006098: pentose-phosphate shunt3.17E-03
72GO:0010206: photosystem II repair3.17E-03
73GO:0034765: regulation of ion transmembrane transport3.17E-03
74GO:0090333: regulation of stomatal closure3.17E-03
75GO:0006754: ATP biosynthetic process3.17E-03
76GO:0010114: response to red light3.47E-03
77GO:0009098: leucine biosynthetic process3.55E-03
78GO:0010267: production of ta-siRNAs involved in RNA interference3.55E-03
79GO:0010380: regulation of chlorophyll biosynthetic process3.55E-03
80GO:0010205: photoinhibition3.55E-03
81GO:0009409: response to cold3.77E-03
82GO:0006995: cellular response to nitrogen starvation3.95E-03
83GO:0019538: protein metabolic process3.95E-03
84GO:0009688: abscisic acid biosynthetic process3.95E-03
85GO:0009773: photosynthetic electron transport in photosystem I4.36E-03
86GO:0043085: positive regulation of catalytic activity4.36E-03
87GO:0000272: polysaccharide catabolic process4.36E-03
88GO:0009750: response to fructose4.36E-03
89GO:0018119: peptidyl-cysteine S-nitrosylation4.36E-03
90GO:0000038: very long-chain fatty acid metabolic process4.36E-03
91GO:0015979: photosynthesis4.75E-03
92GO:0002213: defense response to insect4.79E-03
93GO:0016925: protein sumoylation4.79E-03
94GO:0006006: glucose metabolic process5.22E-03
95GO:0005986: sucrose biosynthetic process5.22E-03
96GO:0006096: glycolytic process5.50E-03
97GO:0006541: glutamine metabolic process5.68E-03
98GO:0005985: sucrose metabolic process6.14E-03
99GO:0009833: plant-type primary cell wall biogenesis6.62E-03
100GO:0019762: glucosinolate catabolic process6.62E-03
101GO:0006406: mRNA export from nucleus7.11E-03
102GO:0008152: metabolic process7.45E-03
103GO:0009695: jasmonic acid biosynthetic process7.62E-03
104GO:0006825: copper ion transport7.62E-03
105GO:0019953: sexual reproduction7.62E-03
106GO:0031408: oxylipin biosynthetic process8.14E-03
107GO:0051260: protein homooligomerization8.14E-03
108GO:0061077: chaperone-mediated protein folding8.14E-03
109GO:2000022: regulation of jasmonic acid mediated signaling pathway8.67E-03
110GO:0006730: one-carbon metabolic process8.67E-03
111GO:0030433: ubiquitin-dependent ERAD pathway8.67E-03
112GO:0030245: cellulose catabolic process8.67E-03
113GO:0042742: defense response to bacterium8.80E-03
114GO:0071555: cell wall organization8.80E-03
115GO:0009306: protein secretion9.77E-03
116GO:0070417: cellular response to cold1.03E-02
117GO:0016117: carotenoid biosynthetic process1.03E-02
118GO:0006633: fatty acid biosynthetic process1.04E-02
119GO:0042335: cuticle development1.09E-02
120GO:0042391: regulation of membrane potential1.09E-02
121GO:0042631: cellular response to water deprivation1.09E-02
122GO:0010197: polar nucleus fusion1.15E-02
123GO:0010182: sugar mediated signaling pathway1.15E-02
124GO:0048868: pollen tube development1.15E-02
125GO:0007059: chromosome segregation1.21E-02
126GO:0009646: response to absence of light1.21E-02
127GO:0019252: starch biosynthetic process1.27E-02
128GO:0031047: gene silencing by RNA1.40E-02
129GO:0007264: small GTPase mediated signal transduction1.40E-02
130GO:0071805: potassium ion transmembrane transport1.60E-02
131GO:0051607: defense response to virus1.66E-02
132GO:0010411: xyloglucan metabolic process1.95E-02
133GO:0030244: cellulose biosynthetic process2.09E-02
134GO:0018298: protein-chromophore linkage2.09E-02
135GO:0000160: phosphorelay signal transduction system2.17E-02
136GO:0009813: flavonoid biosynthetic process2.17E-02
137GO:0009910: negative regulation of flower development2.32E-02
138GO:0044550: secondary metabolite biosynthetic process2.40E-02
139GO:0009853: photorespiration2.48E-02
140GO:0045454: cell redox homeostasis2.64E-02
141GO:0006839: mitochondrial transport2.72E-02
142GO:0006631: fatty acid metabolic process2.80E-02
143GO:0009744: response to sucrose2.97E-02
144GO:0000209: protein polyubiquitination3.05E-02
145GO:0042546: cell wall biogenesis3.05E-02
146GO:0016042: lipid catabolic process3.16E-02
147GO:0009414: response to water deprivation3.21E-02
148GO:0009408: response to heat3.26E-02
149GO:0006397: mRNA processing3.40E-02
150GO:0042538: hyperosmotic salinity response3.49E-02
151GO:0006364: rRNA processing3.67E-02
152GO:0009585: red, far-red light phototransduction3.67E-02
153GO:0006813: potassium ion transport3.67E-02
154GO:0009736: cytokinin-activated signaling pathway3.67E-02
155GO:0006417: regulation of translation3.95E-02
156GO:0006396: RNA processing4.81E-02
RankGO TermAdjusted P value
1GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
2GO:0046905: phytoene synthase activity0.00E+00
3GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
4GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
5GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
6GO:0015284: fructose uniporter activity0.00E+00
7GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
8GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
9GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
10GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
11GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
12GO:0051287: NAD binding4.18E-05
13GO:0019899: enzyme binding7.02E-05
14GO:0008568: microtubule-severing ATPase activity1.35E-04
15GO:0016618: hydroxypyruvate reductase activity1.35E-04
16GO:0051996: squalene synthase activity1.35E-04
17GO:0010313: phytochrome binding1.35E-04
18GO:0003984: acetolactate synthase activity1.35E-04
19GO:0008242: omega peptidase activity1.35E-04
20GO:0035671: enone reductase activity1.35E-04
21GO:0046906: tetrapyrrole binding1.35E-04
22GO:0004451: isocitrate lyase activity1.35E-04
23GO:0090422: thiamine pyrophosphate transporter activity1.35E-04
24GO:0004013: adenosylhomocysteinase activity1.35E-04
25GO:0018708: thiol S-methyltransferase activity3.11E-04
26GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity3.11E-04
27GO:0005353: fructose transmembrane transporter activity3.11E-04
28GO:0034722: gamma-glutamyl-peptidase activity3.11E-04
29GO:0004310: farnesyl-diphosphate farnesyltransferase activity3.11E-04
30GO:0003862: 3-isopropylmalate dehydrogenase activity3.11E-04
31GO:0010297: heteropolysaccharide binding3.11E-04
32GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity3.11E-04
33GO:0004047: aminomethyltransferase activity3.11E-04
34GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.11E-04
35GO:0008168: methyltransferase activity4.81E-04
36GO:0003935: GTP cyclohydrolase II activity5.13E-04
37GO:0030267: glyoxylate reductase (NADP) activity5.13E-04
38GO:0071917: triose-phosphate transmembrane transporter activity5.13E-04
39GO:0019948: SUMO activating enzyme activity5.13E-04
40GO:0008430: selenium binding5.13E-04
41GO:0010277: chlorophyllide a oxygenase [overall] activity5.13E-04
42GO:0048027: mRNA 5'-UTR binding7.34E-04
43GO:0022890: inorganic cation transmembrane transporter activity7.34E-04
44GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity7.34E-04
45GO:0047134: protein-disulfide reductase activity8.13E-04
46GO:0052689: carboxylic ester hydrolase activity8.22E-04
47GO:0015098: molybdate ion transmembrane transporter activity9.73E-04
48GO:0043495: protein anchor9.73E-04
49GO:0008878: glucose-1-phosphate adenylyltransferase activity9.73E-04
50GO:0015120: phosphoglycerate transmembrane transporter activity9.73E-04
51GO:0080032: methyl jasmonate esterase activity9.73E-04
52GO:0004791: thioredoxin-disulfide reductase activity1.01E-03
53GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.23E-03
54GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen1.23E-03
55GO:0009922: fatty acid elongase activity1.23E-03
56GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.30E-03
57GO:0080030: methyl indole-3-acetate esterase activity1.51E-03
58GO:0004332: fructose-bisphosphate aldolase activity1.51E-03
59GO:0005242: inward rectifier potassium channel activity1.81E-03
60GO:0042802: identical protein binding2.38E-03
61GO:0005375: copper ion transmembrane transporter activity2.81E-03
62GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.81E-03
63GO:0071949: FAD binding3.17E-03
64GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism3.17E-03
65GO:0015386: potassium:proton antiporter activity4.36E-03
66GO:0005507: copper ion binding5.16E-03
67GO:0004565: beta-galactosidase activity5.22E-03
68GO:0004089: carbonate dehydratase activity5.22E-03
69GO:0031072: heat shock protein binding5.22E-03
70GO:0051119: sugar transmembrane transporter activity6.14E-03
71GO:0102336: 3-oxo-arachidoyl-CoA synthase activity6.62E-03
72GO:0102337: 3-oxo-cerotoyl-CoA synthase activity6.62E-03
73GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity6.62E-03
74GO:0015035: protein disulfide oxidoreductase activity6.82E-03
75GO:0005528: FK506 binding7.11E-03
76GO:0015079: potassium ion transmembrane transporter activity7.62E-03
77GO:0008810: cellulase activity9.21E-03
78GO:0016760: cellulose synthase (UDP-forming) activity9.21E-03
79GO:0022891: substrate-specific transmembrane transporter activity9.21E-03
80GO:0003727: single-stranded RNA binding9.77E-03
81GO:0003824: catalytic activity1.01E-02
82GO:0030551: cyclic nucleotide binding1.09E-02
83GO:0005249: voltage-gated potassium channel activity1.09E-02
84GO:0008080: N-acetyltransferase activity1.15E-02
85GO:0015299: solute:proton antiporter activity1.21E-02
86GO:0050662: coenzyme binding1.21E-02
87GO:0016762: xyloglucan:xyloglucosyl transferase activity1.34E-02
88GO:0004518: nuclease activity1.40E-02
89GO:0000156: phosphorelay response regulator activity1.46E-02
90GO:0016759: cellulose synthase activity1.53E-02
91GO:0008483: transaminase activity1.60E-02
92GO:0016722: oxidoreductase activity, oxidizing metal ions1.60E-02
93GO:0016597: amino acid binding1.66E-02
94GO:0016168: chlorophyll binding1.80E-02
95GO:0016788: hydrolase activity, acting on ester bonds1.81E-02
96GO:0016798: hydrolase activity, acting on glycosyl bonds1.95E-02
97GO:0008757: S-adenosylmethionine-dependent methyltransferase activity2.02E-02
98GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.48E-02
99GO:0050661: NADP binding2.72E-02
100GO:0043621: protein self-association3.14E-02
101GO:0051537: 2 iron, 2 sulfur cluster binding3.14E-02
102GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.31E-02
103GO:0009055: electron carrier activity3.49E-02
104GO:0016298: lipase activity3.76E-02
105GO:0031625: ubiquitin protein ligase binding3.95E-02
106GO:0016874: ligase activity4.52E-02
107GO:0016491: oxidoreductase activity4.64E-02
108GO:0051082: unfolded protein binding4.71E-02
109GO:0016746: transferase activity, transferring acyl groups4.81E-02
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Gene type



Gene DE type