co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
2	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
3	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
4	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
5	GO:0006399: tRNA metabolic process	0.00E+00
6	GO:0015843: methylammonium transport	0.00E+00
7	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
8	GO:0035884: arabinan biosynthetic process	0.00E+00
9	GO:0009904: chloroplast accumulation movement	4.22E-05
10	GO:0009903: chloroplast avoidance movement	8.69E-05
11	GO:0006002: fructose 6-phosphate metabolic process	1.85E-04
12	GO:0043266: regulation of potassium ion transport	1.86E-04
13	GO:2000021: regulation of ion homeostasis	1.86E-04
14	GO:0043609: regulation of carbon utilization	1.86E-04
15	GO:0000066: mitochondrial ornithine transport	1.86E-04
16	GO:0050801: ion homeostasis	1.86E-04
17	GO:0045036: protein targeting to chloroplast	3.16E-04
18	GO:0071497: cellular response to freezing	4.19E-04
19	GO:0042325: regulation of phosphorylation	4.19E-04
20	GO:0031648: protein destabilization	4.19E-04
21	GO:0042550: photosystem I stabilization	4.19E-04
22	GO:0010447: response to acidic pH	6.84E-04
23	GO:0031022: nuclear migration along microfilament	6.84E-04
24	GO:0019419: sulfate reduction	6.84E-04
25	GO:0006000: fructose metabolic process	6.84E-04
26	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.73E-04
27	GO:0015696: ammonium transport	9.77E-04
28	GO:0046739: transport of virus in multicellular host	9.77E-04
29	GO:0043572: plastid fission	9.77E-04
30	GO:2001141: regulation of RNA biosynthetic process	9.77E-04
31	GO:0051639: actin filament network formation	9.77E-04
32	GO:0006346: methylation-dependent chromatin silencing	1.29E-03
33	GO:1901141: regulation of lignin biosynthetic process	1.29E-03
34	GO:0051764: actin crosslink formation	1.29E-03
35	GO:0072488: ammonium transmembrane transport	1.29E-03
36	GO:0030163: protein catabolic process	2.01E-03
37	GO:0042793: transcription from plastid promoter	2.03E-03
38	GO:0030488: tRNA methylation	2.43E-03
39	GO:2000067: regulation of root morphogenesis	2.43E-03
40	GO:0006400: tRNA modification	2.87E-03
41	GO:0007050: cell cycle arrest	2.87E-03
42	GO:0010411: xyloglucan metabolic process	2.99E-03
43	GO:0019375: galactolipid biosynthetic process	3.32E-03
44	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.32E-03
45	GO:0046620: regulation of organ growth	3.32E-03
46	GO:0006499: N-terminal protein myristoylation	3.64E-03
47	GO:0006526: arginine biosynthetic process	3.80E-03
48	GO:0032544: plastid translation	3.80E-03
49	GO:0071482: cellular response to light stimulus	3.80E-03
50	GO:0010497: plasmodesmata-mediated intercellular transport	3.80E-03
51	GO:0009637: response to blue light	4.19E-03
52	GO:0051865: protein autoubiquitination	4.30E-03
53	GO:0010206: photosystem II repair	4.30E-03
54	GO:0000373: Group II intron splicing	4.30E-03
55	GO:0006839: mitochondrial transport	4.76E-03
56	GO:0000103: sulfate assimilation	5.36E-03
57	GO:0009658: chloroplast organization	5.38E-03
58	GO:0042546: cell wall biogenesis	5.61E-03
59	GO:1903507: negative regulation of nucleic acid-templated transcription	5.92E-03
60	GO:0006352: DNA-templated transcription, initiation	5.92E-03
61	GO:0045037: protein import into chloroplast stroma	6.51E-03
62	GO:2000012: regulation of auxin polar transport	7.11E-03
63	GO:0010020: chloroplast fission	7.73E-03
64	GO:0010039: response to iron ion	8.37E-03
65	GO:0006096: glycolytic process	8.59E-03
66	GO:0051017: actin filament bundle assembly	9.71E-03
67	GO:0005992: trehalose biosynthetic process	9.71E-03
68	GO:0019344: cysteine biosynthetic process	9.71E-03
69	GO:0000027: ribosomal large subunit assembly	9.71E-03
70	GO:0031408: oxylipin biosynthetic process	1.11E-02
71	GO:0016998: cell wall macromolecule catabolic process	1.11E-02
72	GO:0006306: DNA methylation	1.11E-02
73	GO:0006730: one-carbon metabolic process	1.19E-02
74	GO:0006508: proteolysis	1.19E-02
75	GO:0010091: trichome branching	1.34E-02
76	GO:0007018: microtubule-based movement	1.66E-02
77	GO:0071555: cell wall organization	1.73E-02
78	GO:0055072: iron ion homeostasis	1.75E-02
79	GO:0031047: gene silencing by RNA	1.92E-02
80	GO:0009828: plant-type cell wall loosening	2.10E-02
81	GO:0010468: regulation of gene expression	2.14E-02
82	GO:0009911: positive regulation of flower development	2.38E-02
83	GO:0006974: cellular response to DNA damage stimulus	2.58E-02
84	GO:0042254: ribosome biogenesis	2.83E-02
85	GO:0009832: plant-type cell wall biogenesis	2.98E-02
86	GO:0000160: phosphorelay signal transduction system	2.98E-02
87	GO:0010311: lateral root formation	2.98E-02
88	GO:0006810: transport	3.05E-02
89	GO:0009631: cold acclimation	3.19E-02
90	GO:0009867: jasmonic acid mediated signaling pathway	3.40E-02
91	GO:0010114: response to red light	4.08E-02
92	GO:0009926: auxin polar transport	4.08E-02
93	GO:0009965: leaf morphogenesis	4.43E-02
94	GO:0031347: regulation of defense response	4.67E-02
95	GO:0006812: cation transport	4.79E-02
96	GO:0042538: hyperosmotic salinity response	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
2	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
3	GO:0004056: argininosuccinate lyase activity	0.00E+00
4	GO:0004358: glutamate N-acetyltransferase activity	0.00E+00
5	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	1.86E-04
6	GO:0046481: digalactosyldiacylglycerol synthase activity	1.86E-04
7	GO:0050139: nicotinate-N-glucosyltransferase activity	1.86E-04
8	GO:0046480: galactolipid galactosyltransferase activity	1.86E-04
9	GO:0005227: calcium activated cation channel activity	1.86E-04
10	GO:0005290: L-histidine transmembrane transporter activity	1.86E-04
11	GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity	1.86E-04
12	GO:0009973: adenylyl-sulfate reductase activity	4.19E-04
13	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	4.19E-04
14	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	4.19E-04
15	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.19E-04
16	GO:0000064: L-ornithine transmembrane transporter activity	4.19E-04
17	GO:0052692: raffinose alpha-galactosidase activity	6.84E-04
18	GO:0046524: sucrose-phosphate synthase activity	6.84E-04
19	GO:0004557: alpha-galactosidase activity	6.84E-04
20	GO:0035250: UDP-galactosyltransferase activity	9.77E-04
21	GO:0015189: L-lysine transmembrane transporter activity	9.77E-04
22	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	9.77E-04
23	GO:0015181: arginine transmembrane transporter activity	9.77E-04
24	GO:0001053: plastid sigma factor activity	1.29E-03
25	GO:0016987: sigma factor activity	1.29E-03
26	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.65E-03
27	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.77E-03
28	GO:0008519: ammonium transmembrane transporter activity	2.03E-03
29	GO:2001070: starch binding	2.03E-03
30	GO:0008195: phosphatidate phosphatase activity	2.43E-03
31	GO:0003872: 6-phosphofructokinase activity	2.87E-03
32	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.99E-03
33	GO:0008173: RNA methyltransferase activity	3.80E-03
34	GO:0004805: trehalose-phosphatase activity	5.36E-03
35	GO:0043621: protein self-association	5.83E-03
36	GO:0005089: Rho guanyl-nucleotide exchange factor activity	5.92E-03
37	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.51E-03
38	GO:0004089: carbonate dehydratase activity	7.11E-03
39	GO:0019888: protein phosphatase regulator activity	7.11E-03
40	GO:0009982: pseudouridine synthase activity	7.11E-03
41	GO:0004190: aspartic-type endopeptidase activity	8.37E-03
42	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	9.03E-03
43	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	9.03E-03
44	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	9.03E-03
45	GO:0003714: transcription corepressor activity	9.71E-03
46	GO:0005345: purine nucleobase transmembrane transporter activity	1.04E-02
47	GO:0004176: ATP-dependent peptidase activity	1.11E-02
48	GO:0003964: RNA-directed DNA polymerase activity	1.11E-02
49	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.11E-02
50	GO:0004707: MAP kinase activity	1.11E-02
51	GO:0004252: serine-type endopeptidase activity	1.44E-02
52	GO:0008536: Ran GTPase binding	1.58E-02
53	GO:0010181: FMN binding	1.66E-02
54	GO:0000156: phosphorelay response regulator activity	2.01E-02
55	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.01E-02
56	GO:0051015: actin filament binding	2.01E-02
57	GO:0016887: ATPase activity	2.02E-02
58	GO:0008237: metallopeptidase activity	2.19E-02
59	GO:0008236: serine-type peptidase activity	2.78E-02
60	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.88E-02
61	GO:0003682: chromatin binding	2.94E-02
62	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.08E-02
63	GO:0004222: metalloendopeptidase activity	3.08E-02
64	GO:0003993: acid phosphatase activity	3.51E-02
65	GO:0042393: histone binding	3.74E-02
66	GO:0051539: 4 iron, 4 sulfur cluster binding	3.74E-02
67	GO:0016757: transferase activity, transferring glycosyl groups	3.95E-02
68	GO:0042803: protein homodimerization activity	4.31E-02
69	GO:0004871: signal transducer activity	4.31E-02
70	GO:0003735: structural constituent of ribosome	4.73E-02