Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48657

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010647: positive regulation of cell communication0.00E+00
2GO:1902001: fatty acid transmembrane transport0.00E+00
3GO:1902289: negative regulation of defense response to oomycetes0.00E+00
4GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0002376: immune system process0.00E+00
7GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
8GO:0002764: immune response-regulating signaling pathway0.00E+00
9GO:1902009: positive regulation of toxin transport0.00E+00
10GO:0010324: membrane invagination0.00E+00
11GO:0006182: cGMP biosynthetic process0.00E+00
12GO:0071327: cellular response to trehalose stimulus0.00E+00
13GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
14GO:0010200: response to chitin1.28E-09
15GO:0009617: response to bacterium1.84E-08
16GO:0006468: protein phosphorylation1.97E-08
17GO:0009751: response to salicylic acid1.03E-06
18GO:0060548: negative regulation of cell death1.13E-06
19GO:0019725: cellular homeostasis8.28E-06
20GO:0031348: negative regulation of defense response2.29E-05
21GO:0015696: ammonium transport6.19E-05
22GO:0035556: intracellular signal transduction8.78E-05
23GO:0072488: ammonium transmembrane transport1.09E-04
24GO:0080142: regulation of salicylic acid biosynthetic process1.09E-04
25GO:0009266: response to temperature stimulus1.47E-04
26GO:0010225: response to UV-C1.68E-04
27GO:0045927: positive regulation of growth1.68E-04
28GO:0042742: defense response to bacterium1.76E-04
29GO:0007166: cell surface receptor signaling pathway1.85E-04
30GO:0009737: response to abscisic acid2.02E-04
31GO:0009626: plant-type hypersensitive response2.09E-04
32GO:0009620: response to fungus2.22E-04
33GO:0009759: indole glucosinolate biosynthetic process2.39E-04
34GO:1900056: negative regulation of leaf senescence4.14E-04
35GO:0042350: GDP-L-fucose biosynthetic process4.32E-04
36GO:0019567: arabinose biosynthetic process4.32E-04
37GO:0015969: guanosine tetraphosphate metabolic process4.32E-04
38GO:0009609: response to symbiotic bacterium4.32E-04
39GO:0051180: vitamin transport4.32E-04
40GO:0010421: hydrogen peroxide-mediated programmed cell death4.32E-04
41GO:0010482: regulation of epidermal cell division4.32E-04
42GO:0030974: thiamine pyrophosphate transport4.32E-04
43GO:1901183: positive regulation of camalexin biosynthetic process4.32E-04
44GO:0009270: response to humidity4.32E-04
45GO:0050691: regulation of defense response to virus by host4.32E-04
46GO:0006643: membrane lipid metabolic process4.32E-04
47GO:0048482: plant ovule morphogenesis4.32E-04
48GO:0016192: vesicle-mediated transport6.21E-04
49GO:2000031: regulation of salicylic acid mediated signaling pathway6.32E-04
50GO:0010150: leaf senescence7.25E-04
51GO:0010112: regulation of systemic acquired resistance7.56E-04
52GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.92E-04
53GO:0055088: lipid homeostasis9.33E-04
54GO:0000719: photoreactive repair9.33E-04
55GO:0015908: fatty acid transport9.33E-04
56GO:0044419: interspecies interaction between organisms9.33E-04
57GO:0031349: positive regulation of defense response9.33E-04
58GO:0015893: drug transport9.33E-04
59GO:0051258: protein polymerization9.33E-04
60GO:0071668: plant-type cell wall assembly9.33E-04
61GO:0002221: pattern recognition receptor signaling pathway9.33E-04
62GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.33E-04
63GO:0009838: abscission9.33E-04
64GO:0080185: effector dependent induction by symbiont of host immune response9.33E-04
65GO:0010618: aerenchyma formation9.33E-04
66GO:0080181: lateral root branching9.33E-04
67GO:0001666: response to hypoxia1.22E-03
68GO:0009816: defense response to bacterium, incompatible interaction1.31E-03
69GO:0008361: regulation of cell size1.36E-03
70GO:0012501: programmed cell death1.36E-03
71GO:0018105: peptidyl-serine phosphorylation1.51E-03
72GO:0015695: organic cation transport1.52E-03
73GO:0009653: anatomical structure morphogenesis1.52E-03
74GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.52E-03
75GO:0016045: detection of bacterium1.52E-03
76GO:0034051: negative regulation of plant-type hypersensitive response1.52E-03
77GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.52E-03
78GO:1900140: regulation of seedling development1.52E-03
79GO:0010359: regulation of anion channel activity1.52E-03
80GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.52E-03
81GO:0045793: positive regulation of cell size1.52E-03
82GO:0010186: positive regulation of cellular defense response1.52E-03
83GO:0046621: negative regulation of organ growth1.52E-03
84GO:0008219: cell death1.71E-03
85GO:0002237: response to molecule of bacterial origin1.75E-03
86GO:0007034: vacuolar transport1.75E-03
87GO:0006979: response to oxidative stress1.82E-03
88GO:0043207: response to external biotic stimulus2.19E-03
89GO:0072334: UDP-galactose transmembrane transport2.19E-03
90GO:0015749: monosaccharide transport2.19E-03
91GO:0009226: nucleotide-sugar biosynthetic process2.19E-03
92GO:0030100: regulation of endocytosis2.19E-03
93GO:0072583: clathrin-dependent endocytosis2.19E-03
94GO:0048530: fruit morphogenesis2.19E-03
95GO:0002679: respiratory burst involved in defense response2.19E-03
96GO:0051289: protein homotetramerization2.19E-03
97GO:0010116: positive regulation of abscisic acid biosynthetic process2.19E-03
98GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.42E-03
99GO:0046777: protein autophosphorylation2.57E-03
100GO:0009652: thigmotropism2.95E-03
101GO:1902584: positive regulation of response to water deprivation2.95E-03
102GO:0033358: UDP-L-arabinose biosynthetic process2.95E-03
103GO:0051567: histone H3-K9 methylation2.95E-03
104GO:0045227: capsule polysaccharide biosynthetic process2.95E-03
105GO:0046345: abscisic acid catabolic process2.95E-03
106GO:0010483: pollen tube reception2.95E-03
107GO:2000022: regulation of jasmonic acid mediated signaling pathway3.22E-03
108GO:0071456: cellular response to hypoxia3.22E-03
109GO:0006886: intracellular protein transport3.31E-03
110GO:0009625: response to insect3.51E-03
111GO:0034052: positive regulation of plant-type hypersensitive response3.78E-03
112GO:0031347: regulation of defense response4.10E-03
113GO:0006952: defense response4.31E-03
114GO:0048317: seed morphogenesis4.68E-03
115GO:1900425: negative regulation of defense response to bacterium4.68E-03
116GO:0006574: valine catabolic process4.68E-03
117GO:0010942: positive regulation of cell death4.68E-03
118GO:0009753: response to jasmonic acid5.12E-03
119GO:0009749: response to glucose5.57E-03
120GO:0042372: phylloquinone biosynthetic process5.64E-03
121GO:0045926: negative regulation of growth5.64E-03
122GO:0009612: response to mechanical stimulus5.64E-03
123GO:0034389: lipid particle organization5.64E-03
124GO:0009094: L-phenylalanine biosynthetic process5.64E-03
125GO:0048509: regulation of meristem development5.64E-03
126GO:0031930: mitochondria-nucleus signaling pathway5.64E-03
127GO:0010199: organ boundary specification between lateral organs and the meristem5.64E-03
128GO:0010555: response to mannitol5.64E-03
129GO:0010310: regulation of hydrogen peroxide metabolic process5.64E-03
130GO:2000067: regulation of root morphogenesis5.64E-03
131GO:0043090: amino acid import6.67E-03
132GO:0071446: cellular response to salicylic acid stimulus6.67E-03
133GO:0080186: developmental vegetative growth6.67E-03
134GO:1902074: response to salt6.67E-03
135GO:0010044: response to aluminum ion6.67E-03
136GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.67E-03
137GO:0009610: response to symbiotic fungus6.67E-03
138GO:0046470: phosphatidylcholine metabolic process6.67E-03
139GO:0006904: vesicle docking involved in exocytosis7.70E-03
140GO:0035265: organ growth7.76E-03
141GO:0009787: regulation of abscisic acid-activated signaling pathway7.76E-03
142GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.76E-03
143GO:0009819: drought recovery7.76E-03
144GO:0030162: regulation of proteolysis7.76E-03
145GO:1900150: regulation of defense response to fungus7.76E-03
146GO:0032875: regulation of DNA endoreduplication7.76E-03
147GO:0009742: brassinosteroid mediated signaling pathway7.95E-03
148GO:0015031: protein transport8.85E-03
149GO:0007186: G-protein coupled receptor signaling pathway8.91E-03
150GO:0010120: camalexin biosynthetic process8.91E-03
151GO:0010497: plasmodesmata-mediated intercellular transport8.91E-03
152GO:0010204: defense response signaling pathway, resistance gene-independent8.91E-03
153GO:0030968: endoplasmic reticulum unfolded protein response8.91E-03
154GO:0010208: pollen wall assembly8.91E-03
155GO:0010099: regulation of photomorphogenesis8.91E-03
156GO:0009627: systemic acquired resistance9.68E-03
157GO:0046685: response to arsenic-containing substance1.01E-02
158GO:0009821: alkaloid biosynthetic process1.01E-02
159GO:0051865: protein autoubiquitination1.01E-02
160GO:0006098: pentose-phosphate shunt1.01E-02
161GO:0007165: signal transduction1.01E-02
162GO:0016049: cell growth1.08E-02
163GO:0008202: steroid metabolic process1.14E-02
164GO:1900426: positive regulation of defense response to bacterium1.14E-02
165GO:0045892: negative regulation of transcription, DNA-templated1.21E-02
166GO:0006032: chitin catabolic process1.27E-02
167GO:0019684: photosynthesis, light reaction1.41E-02
168GO:0009682: induced systemic resistance1.41E-02
169GO:0052544: defense response by callose deposition in cell wall1.41E-02
170GO:0043085: positive regulation of catalytic activity1.41E-02
171GO:0009750: response to fructose1.41E-02
172GO:0048765: root hair cell differentiation1.41E-02
173GO:0002213: defense response to insect1.55E-02
174GO:0010105: negative regulation of ethylene-activated signaling pathway1.55E-02
175GO:2000012: regulation of auxin polar transport1.70E-02
176GO:0018107: peptidyl-threonine phosphorylation1.70E-02
177GO:0055046: microgametogenesis1.70E-02
178GO:0006897: endocytosis1.71E-02
179GO:0006470: protein dephosphorylation1.76E-02
180GO:0009744: response to sucrose1.86E-02
181GO:0051707: response to other organism1.86E-02
182GO:0000209: protein polyubiquitination1.94E-02
183GO:0009225: nucleotide-sugar metabolic process2.01E-02
184GO:0046688: response to copper ion2.01E-02
185GO:0010167: response to nitrate2.01E-02
186GO:0070588: calcium ion transmembrane transport2.01E-02
187GO:0010053: root epidermal cell differentiation2.01E-02
188GO:0007275: multicellular organism development2.22E-02
189GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.25E-02
190GO:0080147: root hair cell development2.33E-02
191GO:0009863: salicylic acid mediated signaling pathway2.33E-02
192GO:0030150: protein import into mitochondrial matrix2.33E-02
193GO:2000377: regulation of reactive oxygen species metabolic process2.33E-02
194GO:0042538: hyperosmotic salinity response2.34E-02
195GO:0010026: trichome differentiation2.50E-02
196GO:0006825: copper ion transport2.50E-02
197GO:0051302: regulation of cell division2.50E-02
198GO:0009809: lignin biosynthetic process2.51E-02
199GO:0019915: lipid storage2.68E-02
200GO:0016998: cell wall macromolecule catabolic process2.68E-02
201GO:0010431: seed maturation2.68E-02
202GO:0006970: response to osmotic stress2.83E-02
203GO:0030433: ubiquitin-dependent ERAD pathway2.85E-02
204GO:0009411: response to UV3.04E-02
205GO:0006012: galactose metabolic process3.04E-02
206GO:0009723: response to ethylene3.09E-02
207GO:0009306: protein secretion3.22E-02
208GO:0080167: response to karrikin3.37E-02
209GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.41E-02
210GO:0006662: glycerol ether metabolic process3.81E-02
211GO:0046323: glucose import3.81E-02
212GO:0009741: response to brassinosteroid3.81E-02
213GO:0009611: response to wounding3.91E-02
214GO:0009646: response to absence of light4.01E-02
215GO:0008654: phospholipid biosynthetic process4.21E-02
216GO:0071554: cell wall organization or biogenesis4.42E-02
217GO:0002229: defense response to oomycetes4.42E-02
218GO:0045893: positive regulation of transcription, DNA-templated4.62E-02
219GO:0007264: small GTPase mediated signal transduction4.63E-02
220GO:0016032: viral process4.63E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
3GO:0004168: dolichol kinase activity0.00E+00
4GO:0008320: protein transmembrane transporter activity1.59E-07
5GO:0004672: protein kinase activity1.87E-06
6GO:0016301: kinase activity4.36E-06
7GO:0004674: protein serine/threonine kinase activity2.02E-05
8GO:0005509: calcium ion binding1.34E-04
9GO:0008519: ammonium transmembrane transporter activity2.39E-04
10GO:0033612: receptor serine/threonine kinase binding3.07E-04
11GO:1901149: salicylic acid binding4.32E-04
12GO:0090422: thiamine pyrophosphate transporter activity4.32E-04
13GO:0015085: calcium ion transmembrane transporter activity4.32E-04
14GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.32E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.32E-04
16GO:2001147: camalexin binding4.32E-04
17GO:0015245: fatty acid transporter activity4.32E-04
18GO:0050577: GDP-L-fucose synthase activity4.32E-04
19GO:0009679: hexose:proton symporter activity4.32E-04
20GO:0032050: clathrin heavy chain binding4.32E-04
21GO:2001227: quercitrin binding4.32E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity5.18E-04
23GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.40E-04
24GO:0015036: disulfide oxidoreductase activity9.33E-04
25GO:0008728: GTP diphosphokinase activity9.33E-04
26GO:0005524: ATP binding9.77E-04
27GO:0004713: protein tyrosine kinase activity1.04E-03
28GO:0008375: acetylglucosaminyltransferase activity1.41E-03
29GO:0009931: calcium-dependent protein serine/threonine kinase activity1.41E-03
30GO:0004683: calmodulin-dependent protein kinase activity1.50E-03
31GO:0016531: copper chaperone activity1.52E-03
32GO:0031683: G-protein beta/gamma-subunit complex binding1.52E-03
33GO:0004383: guanylate cyclase activity1.52E-03
34GO:0001664: G-protein coupled receptor binding1.52E-03
35GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.52E-03
36GO:0004712: protein serine/threonine/tyrosine kinase activity2.60E-03
37GO:0019199: transmembrane receptor protein kinase activity2.95E-03
38GO:0050373: UDP-arabinose 4-epimerase activity2.95E-03
39GO:0047769: arogenate dehydratase activity2.95E-03
40GO:0004664: prephenate dehydratase activity2.95E-03
41GO:0005515: protein binding3.03E-03
42GO:0004871: signal transducer activity3.40E-03
43GO:0010294: abscisic acid glucosyltransferase activity3.78E-03
44GO:0005459: UDP-galactose transmembrane transporter activity3.78E-03
45GO:0015145: monosaccharide transmembrane transporter activity3.78E-03
46GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.78E-03
47GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.78E-03
48GO:0004605: phosphatidate cytidylyltransferase activity4.68E-03
49GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.64E-03
50GO:0003978: UDP-glucose 4-epimerase activity5.64E-03
51GO:0004656: procollagen-proline 4-dioxygenase activity5.64E-03
52GO:0043295: glutathione binding6.67E-03
53GO:0043565: sequence-specific DNA binding7.63E-03
54GO:0005544: calcium-dependent phospholipid binding7.76E-03
55GO:0004869: cysteine-type endopeptidase inhibitor activity7.76E-03
56GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity8.91E-03
57GO:0008142: oxysterol binding8.91E-03
58GO:0004630: phospholipase D activity8.91E-03
59GO:0004806: triglyceride lipase activity1.02E-02
60GO:0047617: acyl-CoA hydrolase activity1.14E-02
61GO:0016844: strictosidine synthase activity1.14E-02
62GO:0008047: enzyme activator activity1.27E-02
63GO:0030234: enzyme regulator activity1.27E-02
64GO:0004568: chitinase activity1.27E-02
65GO:0008171: O-methyltransferase activity1.27E-02
66GO:0005543: phospholipid binding1.41E-02
67GO:0015198: oligopeptide transporter activity1.55E-02
68GO:0005388: calcium-transporting ATPase activity1.70E-02
69GO:0043130: ubiquitin binding2.33E-02
70GO:0031418: L-ascorbic acid binding2.33E-02
71GO:0005516: calmodulin binding2.48E-02
72GO:0043424: protein histidine kinase binding2.50E-02
73GO:0004707: MAP kinase activity2.68E-02
74GO:0019706: protein-cysteine S-palmitoyltransferase activity2.68E-02
75GO:0008234: cysteine-type peptidase activity2.78E-02
76GO:0031625: ubiquitin protein ligase binding2.78E-02
77GO:0005525: GTP binding2.88E-02
78GO:0047134: protein-disulfide reductase activity3.41E-02
79GO:0016746: transferase activity, transferring acyl groups3.68E-02
80GO:0050662: coenzyme binding4.01E-02
81GO:0004791: thioredoxin-disulfide reductase activity4.01E-02
82GO:0016853: isomerase activity4.01E-02
83GO:0004197: cysteine-type endopeptidase activity4.63E-02
84GO:0004722: protein serine/threonine phosphatase activity4.70E-02
85GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.85E-02
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Gene type



Gene DE type