Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48545

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071311: cellular response to acetate0.00E+00
2GO:0071260: cellular response to mechanical stimulus0.00E+00
3GO:0007037: vacuolar phosphate transport0.00E+00
4GO:0031116: positive regulation of microtubule polymerization0.00E+00
5GO:0009733: response to auxin6.41E-05
6GO:0034080: CENP-A containing nucleosome assembly1.08E-04
7GO:0005991: trehalose metabolic process1.08E-04
8GO:0051418: microtubule nucleation by microtubule organizing center1.08E-04
9GO:0071028: nuclear mRNA surveillance1.08E-04
10GO:0040008: regulation of growth1.39E-04
11GO:0031125: rRNA 3'-end processing2.52E-04
12GO:0071051: polyadenylation-dependent snoRNA 3'-end processing2.52E-04
13GO:0034475: U4 snRNA 3'-end processing2.52E-04
14GO:0033566: gamma-tubulin complex localization2.52E-04
15GO:0034755: iron ion transmembrane transport2.52E-04
16GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole2.52E-04
17GO:0007154: cell communication2.52E-04
18GO:1900033: negative regulation of trichome patterning2.52E-04
19GO:0007052: mitotic spindle organization4.19E-04
20GO:0016075: rRNA catabolic process4.19E-04
21GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'4.19E-04
22GO:0051127: positive regulation of actin nucleation4.19E-04
23GO:0071230: cellular response to amino acid stimulus4.19E-04
24GO:0001578: microtubule bundle formation4.19E-04
25GO:0034508: centromere complex assembly6.01E-04
26GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly6.01E-04
27GO:0006166: purine ribonucleoside salvage6.01E-04
28GO:0090307: mitotic spindle assembly6.01E-04
29GO:0006164: purine nucleotide biosynthetic process6.01E-04
30GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center6.01E-04
31GO:0009226: nucleotide-sugar biosynthetic process6.01E-04
32GO:0006168: adenine salvage6.01E-04
33GO:0048629: trichome patterning7.98E-04
34GO:0051322: anaphase7.98E-04
35GO:0007020: microtubule nucleation7.98E-04
36GO:0044209: AMP salvage1.01E-03
37GO:0046785: microtubule polymerization1.01E-03
38GO:0000741: karyogamy1.23E-03
39GO:0009734: auxin-activated signaling pathway1.32E-03
40GO:0009627: systemic acquired resistance1.36E-03
41GO:0080086: stamen filament development1.47E-03
42GO:0009648: photoperiodism1.47E-03
43GO:0042372: phylloquinone biosynthetic process1.47E-03
44GO:0048528: post-embryonic root development1.73E-03
45GO:0007155: cell adhesion2.00E-03
46GO:0046620: regulation of organ growth2.00E-03
47GO:0070413: trehalose metabolism in response to stress2.00E-03
48GO:0010078: maintenance of root meristem identity2.00E-03
49GO:0043562: cellular response to nitrogen levels2.28E-03
50GO:0006997: nucleus organization2.28E-03
51GO:0006189: 'de novo' IMP biosynthetic process2.57E-03
52GO:0009638: phototropism2.88E-03
53GO:0000387: spliceosomal snRNP assembly2.88E-03
54GO:0010018: far-red light signaling pathway2.88E-03
55GO:0009585: red, far-red light phototransduction3.43E-03
56GO:0009684: indoleacetic acid biosynthetic process3.53E-03
57GO:0006816: calcium ion transport3.53E-03
58GO:0006879: cellular iron ion homeostasis3.53E-03
59GO:0030036: actin cytoskeleton organization4.23E-03
60GO:0010588: cotyledon vascular tissue pattern formation4.23E-03
61GO:0016042: lipid catabolic process4.28E-03
62GO:0048467: gynoecium development4.59E-03
63GO:0090351: seedling development4.96E-03
64GO:0010030: positive regulation of seed germination4.96E-03
65GO:0042753: positive regulation of circadian rhythm5.35E-03
66GO:0005992: trehalose biosynthetic process5.75E-03
67GO:0007010: cytoskeleton organization5.75E-03
68GO:0006874: cellular calcium ion homeostasis6.15E-03
69GO:0043622: cortical microtubule organization6.15E-03
70GO:0019722: calcium-mediated signaling7.87E-03
71GO:0009789: positive regulation of abscisic acid-activated signaling pathway8.32E-03
72GO:0070417: cellular response to cold8.32E-03
73GO:0010087: phloem or xylem histogenesis8.79E-03
74GO:0042631: cellular response to water deprivation8.79E-03
75GO:0000226: microtubule cytoskeleton organization8.79E-03
76GO:0000271: polysaccharide biosynthetic process8.79E-03
77GO:0080022: primary root development8.79E-03
78GO:0034220: ion transmembrane transport8.79E-03
79GO:0010197: polar nucleus fusion9.26E-03
80GO:0010182: sugar mediated signaling pathway9.26E-03
81GO:0045489: pectin biosynthetic process9.26E-03
82GO:0009958: positive gravitropism9.26E-03
83GO:0009851: auxin biosynthetic process1.02E-02
84GO:0048825: cotyledon development1.02E-02
85GO:0000302: response to reactive oxygen species1.07E-02
86GO:0010583: response to cyclopentenone1.12E-02
87GO:0009639: response to red or far red light1.23E-02
88GO:0000910: cytokinesis1.34E-02
89GO:0048366: leaf development1.53E-02
90GO:0006468: protein phosphorylation1.61E-02
91GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.67E-02
92GO:0009832: plant-type cell wall biogenesis1.74E-02
93GO:0048527: lateral root development1.86E-02
94GO:0016051: carbohydrate biosynthetic process1.99E-02
95GO:0006839: mitochondrial transport2.18E-02
96GO:0009926: auxin polar transport2.38E-02
97GO:0051707: response to other organism2.38E-02
98GO:0008283: cell proliferation2.38E-02
99GO:0006855: drug transmembrane transport2.66E-02
100GO:0048367: shoot system development3.39E-02
101GO:0006396: RNA processing3.86E-02
102GO:0009416: response to light stimulus4.23E-02
103GO:0009845: seed germination4.69E-02
104GO:0009790: embryo development4.95E-02
RankGO TermAdjusted P value
1GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
2GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
3GO:0015276: ligand-gated ion channel activity0.00E+00
4GO:0050139: nicotinate-N-glucosyltransferase activity1.08E-04
5GO:0008066: glutamate receptor activity1.08E-04
6GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity2.52E-04
7GO:0080097: L-tryptophan:pyruvate aminotransferase activity2.52E-04
8GO:0016788: hydrolase activity, acting on ester bonds3.23E-04
9GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity6.01E-04
10GO:0003999: adenine phosphoribosyltransferase activity6.01E-04
11GO:0017172: cysteine dioxygenase activity6.01E-04
12GO:0080032: methyl jasmonate esterase activity7.98E-04
13GO:0043015: gamma-tubulin binding7.98E-04
14GO:0016846: carbon-sulfur lyase activity1.01E-03
15GO:0042578: phosphoric ester hydrolase activity1.23E-03
16GO:0016208: AMP binding1.23E-03
17GO:0008017: microtubule binding1.26E-03
18GO:0019899: enzyme binding1.73E-03
19GO:0005381: iron ion transmembrane transporter activity2.88E-03
20GO:0052689: carboxylic ester hydrolase activity3.07E-03
21GO:0008327: methyl-CpG binding3.53E-03
22GO:0005262: calcium channel activity4.23E-03
23GO:0000175: 3'-5'-exoribonuclease activity4.23E-03
24GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.59E-03
25GO:0005217: intracellular ligand-gated ion channel activity4.96E-03
26GO:0004970: ionotropic glutamate receptor activity4.96E-03
27GO:0005528: FK506 binding5.75E-03
28GO:0008408: 3'-5' exonuclease activity6.56E-03
29GO:0016829: lyase activity6.58E-03
30GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity6.99E-03
31GO:0030570: pectate lyase activity7.42E-03
32GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.82E-03
33GO:0016791: phosphatase activity1.23E-02
34GO:0030247: polysaccharide binding1.56E-02
35GO:0015238: drug transmembrane transporter activity1.74E-02
36GO:0004871: signal transducer activity2.03E-02
37GO:0042393: histone binding2.18E-02
38GO:0043621: protein self-association2.52E-02
39GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.66E-02
40GO:0003777: microtubule motor activity3.17E-02
41GO:0080043: quercetin 3-O-glucosyltransferase activity3.55E-02
42GO:0080044: quercetin 7-O-glucosyltransferase activity3.55E-02
43GO:0004672: protein kinase activity3.62E-02
44GO:0003779: actin binding3.70E-02
45GO:0016758: transferase activity, transferring hexosyl groups4.35E-02
46GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.52E-02
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Gene type



Gene DE type