Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090355: positive regulation of auxin metabolic process0.00E+00
2GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
3GO:0006480: N-terminal protein amino acid methylation0.00E+00
4GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
5GO:2000469: negative regulation of peroxidase activity0.00E+00
6GO:2000121: regulation of removal of superoxide radicals0.00E+00
7GO:1902395: regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity0.00E+00
8GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.84E-06
9GO:0048657: anther wall tapetum cell differentiation3.50E-05
10GO:1902334: fructose export from vacuole to cytoplasm3.50E-05
11GO:0010322: regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.50E-05
12GO:2000082: regulation of L-ascorbic acid biosynthetic process1.52E-04
13GO:0006168: adenine salvage2.25E-04
14GO:0006166: purine ribonucleoside salvage2.25E-04
15GO:0009963: positive regulation of flavonoid biosynthetic process2.25E-04
16GO:0009647: skotomorphogenesis2.25E-04
17GO:0009649: entrainment of circadian clock3.05E-04
18GO:0048573: photoperiodism, flowering3.47E-04
19GO:0046283: anthocyanin-containing compound metabolic process3.89E-04
20GO:0044209: AMP salvage3.89E-04
21GO:0034052: positive regulation of plant-type hypersensitive response3.89E-04
22GO:1902456: regulation of stomatal opening4.78E-04
23GO:0010315: auxin efflux4.78E-04
24GO:0010189: vitamin E biosynthetic process5.70E-04
25GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.66E-04
26GO:0030307: positive regulation of cell growth6.66E-04
27GO:0043068: positive regulation of programmed cell death7.68E-04
28GO:0010224: response to UV-B8.51E-04
29GO:0009641: shade avoidance1.20E-03
30GO:0006995: cellular response to nitrogen starvation1.20E-03
31GO:0051726: regulation of cell cycle1.21E-03
32GO:0009750: response to fructose1.32E-03
33GO:0000162: tryptophan biosynthetic process1.97E-03
34GO:0007010: cytoskeleton organization2.12E-03
35GO:0051260: protein homooligomerization2.41E-03
36GO:0019915: lipid storage2.41E-03
37GO:0061077: chaperone-mediated protein folding2.41E-03
38GO:0009814: defense response, incompatible interaction2.56E-03
39GO:0010584: pollen exine formation2.87E-03
40GO:0009826: unidimensional cell growth2.88E-03
41GO:0010051: xylem and phloem pattern formation3.20E-03
42GO:0010118: stomatal movement3.20E-03
43GO:0007049: cell cycle3.33E-03
44GO:0010268: brassinosteroid homeostasis3.36E-03
45GO:0009646: response to absence of light3.53E-03
46GO:0009749: response to glucose3.70E-03
47GO:0008654: phospholipid biosynthetic process3.70E-03
48GO:0009851: auxin biosynthetic process3.70E-03
49GO:0016132: brassinosteroid biosynthetic process3.88E-03
50GO:0071554: cell wall organization or biogenesis3.88E-03
51GO:0016125: sterol metabolic process4.42E-03
52GO:0010252: auxin homeostasis4.42E-03
53GO:0045892: negative regulation of transcription, DNA-templated4.48E-03
54GO:0009911: positive regulation of flower development4.99E-03
55GO:0009751: response to salicylic acid5.36E-03
56GO:0009753: response to jasmonic acid5.83E-03
57GO:0009832: plant-type cell wall biogenesis6.19E-03
58GO:0009834: plant-type secondary cell wall biogenesis6.40E-03
59GO:0048527: lateral root development6.61E-03
60GO:0010119: regulation of stomatal movement6.61E-03
61GO:0009853: photorespiration7.05E-03
62GO:0009744: response to sucrose8.41E-03
63GO:0051707: response to other organism8.41E-03
64GO:0009640: photomorphogenesis8.41E-03
65GO:0008643: carbohydrate transport8.88E-03
66GO:0009737: response to abscisic acid8.91E-03
67GO:0009416: response to light stimulus9.64E-03
68GO:0006812: cation transport9.86E-03
69GO:0009585: red, far-red light phototransduction1.04E-02
70GO:0051301: cell division1.05E-02
71GO:0009909: regulation of flower development1.11E-02
72GO:0048367: shoot system development1.19E-02
73GO:0009626: plant-type hypersensitive response1.22E-02
74GO:0009058: biosynthetic process1.62E-02
75GO:0010150: leaf senescence1.96E-02
76GO:0071555: cell wall organization1.96E-02
77GO:0010228: vegetative to reproductive phase transition of meristem2.02E-02
78GO:0009739: response to gibberellin2.12E-02
79GO:0009658: chloroplast organization2.67E-02
80GO:0006970: response to osmotic stress2.82E-02
81GO:0009723: response to ethylene2.96E-02
82GO:0048366: leaf development3.00E-02
83GO:0046686: response to cadmium ion3.05E-02
84GO:0006281: DNA repair4.11E-02
RankGO TermAdjusted P value
1GO:0010276: phytol kinase activity0.00E+00
2GO:0005353: fructose transmembrane transporter activity8.78E-05
3GO:0019901: protein kinase binding1.87E-04
4GO:0003999: adenine phosphoribosyltransferase activity2.25E-04
5GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.23E-04
6GO:0004605: phosphatidate cytidylyltransferase activity4.78E-04
7GO:0015491: cation:cation antiporter activity7.68E-04
8GO:0008515: sucrose transmembrane transporter activity1.32E-03
9GO:0000976: transcription regulatory region sequence-specific DNA binding1.44E-03
10GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.46E-03
11GO:0051119: sugar transmembrane transporter activity1.84E-03
12GO:0016779: nucleotidyltransferase activity2.56E-03
13GO:0005355: glucose transmembrane transporter activity3.53E-03
14GO:0004497: monooxygenase activity3.70E-03
15GO:0016413: O-acetyltransferase activity4.80E-03
16GO:0022857: transmembrane transporter activity1.27E-02
17GO:0019825: oxygen binding1.38E-02
18GO:0005506: iron ion binding1.93E-02
19GO:0008017: microtubule binding2.02E-02
20GO:0042802: identical protein binding2.32E-02
21GO:0020037: heme binding3.09E-02
22GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.54E-02
23GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.82E-02
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Gene type



Gene DE type