co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48400

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006490: oligosaccharide-lipid intermediate biosynthetic process	0.00E+00
2	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
3	GO:0015760: glucose-6-phosphate transport	1.98E-04
4	GO:0000303: response to superoxide	1.98E-04
5	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.98E-04
6	GO:0046244: salicylic acid catabolic process	1.98E-04
7	GO:0002143: tRNA wobble position uridine thiolation	1.98E-04
8	GO:0010204: defense response signaling pathway, resistance gene-independent	2.01E-04
9	GO:0010120: camalexin biosynthetic process	2.01E-04
10	GO:0009870: defense response signaling pathway, resistance gene-dependent	3.43E-04
11	GO:0008535: respiratory chain complex IV assembly	4.43E-04
12	GO:0016197: endosomal transport	4.43E-04
13	GO:0080183: response to photooxidative stress	4.43E-04
14	GO:0009805: coumarin biosynthetic process	4.43E-04
15	GO:0006672: ceramide metabolic process	4.43E-04
16	GO:0035542: regulation of SNARE complex assembly	4.43E-04
17	GO:0015712: hexose phosphate transport	4.43E-04
18	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.22E-04
19	GO:0035436: triose phosphate transmembrane transport	7.22E-04
20	GO:0052324: plant-type cell wall cellulose biosynthetic process	7.22E-04
21	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	7.22E-04
22	GO:0055074: calcium ion homeostasis	7.22E-04
23	GO:0015714: phosphoenolpyruvate transport	7.22E-04
24	GO:0009617: response to bacterium	7.67E-04
25	GO:0006874: cellular calcium ion homeostasis	8.81E-04
26	GO:0001676: long-chain fatty acid metabolic process	1.03E-03
27	GO:0000187: activation of MAPK activity	1.03E-03
28	GO:0002239: response to oomycetes	1.03E-03
29	GO:0006809: nitric oxide biosynthetic process	1.03E-03
30	GO:0010731: protein glutathionylation	1.03E-03
31	GO:0071456: cellular response to hypoxia	1.05E-03
32	GO:0019748: secondary metabolic process	1.05E-03
33	GO:0010109: regulation of photosynthesis	1.37E-03
34	GO:0045227: capsule polysaccharide biosynthetic process	1.37E-03
35	GO:0045088: regulation of innate immune response	1.37E-03
36	GO:0006536: glutamate metabolic process	1.37E-03
37	GO:0033358: UDP-L-arabinose biosynthetic process	1.37E-03
38	GO:0000919: cell plate assembly	1.37E-03
39	GO:0015713: phosphoglycerate transport	1.37E-03
40	GO:0009626: plant-type hypersensitive response	1.47E-03
41	GO:0009620: response to fungus	1.53E-03
42	GO:0042742: defense response to bacterium	1.55E-03
43	GO:0048544: recognition of pollen	1.67E-03
44	GO:0046283: anthocyanin-containing compound metabolic process	1.74E-03
45	GO:0016926: protein desumoylation	1.74E-03
46	GO:0006544: glycine metabolic process	1.74E-03
47	GO:0010193: response to ozone	1.92E-03
48	GO:0048579: negative regulation of long-day photoperiodism, flowering	2.14E-03
49	GO:0009643: photosynthetic acclimation	2.14E-03
50	GO:0050665: hydrogen peroxide biosynthetic process	2.14E-03
51	GO:0006561: proline biosynthetic process	2.14E-03
52	GO:0006563: L-serine metabolic process	2.14E-03
53	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.14E-03
54	GO:0060918: auxin transport	2.14E-03
55	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.57E-03
56	GO:0009612: response to mechanical stimulus	2.57E-03
57	GO:0010044: response to aluminum ion	3.03E-03
58	GO:0048528: post-embryonic root development	3.03E-03
59	GO:1900056: negative regulation of leaf senescence	3.03E-03
60	GO:0050829: defense response to Gram-negative bacterium	3.03E-03
61	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.03E-03
62	GO:0010150: leaf senescence	3.43E-03
63	GO:0019375: galactolipid biosynthetic process	3.51E-03
64	GO:0006102: isocitrate metabolic process	3.51E-03
65	GO:0009819: drought recovery	3.51E-03
66	GO:0008219: cell death	3.59E-03
67	GO:0009407: toxin catabolic process	3.95E-03
68	GO:0009699: phenylpropanoid biosynthetic process	4.02E-03
69	GO:0007186: G-protein coupled receptor signaling pathway	4.02E-03
70	GO:0050832: defense response to fungus	4.52E-03
71	GO:0006099: tricarboxylic acid cycle	4.74E-03
72	GO:0008202: steroid metabolic process	5.10E-03
73	GO:0043067: regulation of programmed cell death	5.10E-03
74	GO:0035999: tetrahydrofolate interconversion	5.10E-03
75	GO:0048268: clathrin coat assembly	5.10E-03
76	GO:0042546: cell wall biogenesis	6.09E-03
77	GO:0009682: induced systemic resistance	6.27E-03
78	GO:0006952: defense response	6.58E-03
79	GO:0006790: sulfur compound metabolic process	6.89E-03
80	GO:0012501: programmed cell death	6.89E-03
81	GO:0009718: anthocyanin-containing compound biosynthetic process	7.52E-03
82	GO:0010102: lateral root morphogenesis	7.52E-03
83	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	7.52E-03
84	GO:0009809: lignin biosynthetic process	7.88E-03
85	GO:0046854: phosphatidylinositol phosphorylation	8.87E-03
86	GO:0007033: vacuole organization	8.87E-03
87	GO:0009225: nucleotide-sugar metabolic process	8.87E-03
88	GO:2000377: regulation of reactive oxygen species metabolic process	1.03E-02
89	GO:0005992: trehalose biosynthetic process	1.03E-02
90	GO:0000027: ribosomal large subunit assembly	1.03E-02
91	GO:0016575: histone deacetylation	1.10E-02
92	GO:0030433: ubiquitin-dependent ERAD pathway	1.26E-02
93	GO:0031348: negative regulation of defense response	1.26E-02
94	GO:0009814: defense response, incompatible interaction	1.26E-02
95	GO:0010227: floral organ abscission	1.34E-02
96	GO:0006012: galactose metabolic process	1.34E-02
97	GO:0006284: base-excision repair	1.42E-02
98	GO:0009058: biosynthetic process	1.49E-02
99	GO:0008284: positive regulation of cell proliferation	1.50E-02
100	GO:0010051: xylem and phloem pattern formation	1.59E-02
101	GO:0009790: embryo development	1.65E-02
102	GO:0010197: polar nucleus fusion	1.67E-02
103	GO:0006885: regulation of pH	1.67E-02
104	GO:0007275: multicellular organism development	1.82E-02
105	GO:0006623: protein targeting to vacuole	1.85E-02
106	GO:0009749: response to glucose	1.85E-02
107	GO:0002229: defense response to oomycetes	1.94E-02
108	GO:0016032: viral process	2.04E-02
109	GO:0006904: vesicle docking involved in exocytosis	2.33E-02
110	GO:0051607: defense response to virus	2.42E-02
111	GO:0016579: protein deubiquitination	2.42E-02
112	GO:0009607: response to biotic stimulus	2.63E-02
113	GO:0009816: defense response to bacterium, incompatible interaction	2.63E-02
114	GO:0009627: systemic acquired resistance	2.73E-02
115	GO:0010411: xyloglucan metabolic process	2.84E-02
116	GO:0009817: defense response to fungus, incompatible interaction	3.05E-02
117	GO:0006970: response to osmotic stress	3.25E-02
118	GO:0006499: N-terminal protein myristoylation	3.27E-02
119	GO:0010043: response to zinc ion	3.38E-02
120	GO:0009631: cold acclimation	3.38E-02
121	GO:0016051: carbohydrate biosynthetic process	3.61E-02
122	GO:0009867: jasmonic acid mediated signaling pathway	3.61E-02
123	GO:0006887: exocytosis	4.08E-02
124	GO:0006897: endocytosis	4.08E-02
125	GO:0006631: fatty acid metabolic process	4.08E-02
126	GO:0009926: auxin polar transport	4.32E-02
127	GO:0009744: response to sucrose	4.32E-02
128	GO:0051707: response to other organism	4.32E-02
129	GO:0009651: response to salt stress	4.42E-02
130	GO:0000209: protein polyubiquitination	4.45E-02
131	GO:0009636: response to toxic substance	4.70E-02
132	GO:0000165: MAPK cascade	4.95E-02
133	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0052926: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
2	GO:0001729: ceramide kinase activity	0.00E+00
3	GO:0052918: dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
4	GO:0004377: GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
5	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
6	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
7	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
8	GO:0000026: alpha-1,2-mannosyltransferase activity	0.00E+00
9	GO:2001147: camalexin binding	1.98E-04
10	GO:2001227: quercitrin binding	1.98E-04
11	GO:0048037: cofactor binding	1.98E-04
12	GO:0000386: second spliceosomal transesterification activity	1.98E-04
13	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.43E-04
14	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	4.43E-04
15	GO:0015152: glucose-6-phosphate transmembrane transporter activity	4.43E-04
16	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.43E-04
17	GO:0004970: ionotropic glutamate receptor activity	6.52E-04
18	GO:0005217: intracellular ligand-gated ion channel activity	6.52E-04
19	GO:0030246: carbohydrate binding	6.95E-04
20	GO:0071917: triose-phosphate transmembrane transporter activity	7.22E-04
21	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	7.22E-04
22	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.22E-04
23	GO:0004351: glutamate decarboxylase activity	1.03E-03
24	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.03E-03
25	GO:0004792: thiosulfate sulfurtransferase activity	1.03E-03
26	GO:0003727: single-stranded RNA binding	1.24E-03
27	GO:0004576: oligosaccharyl transferase activity	1.37E-03
28	GO:0009916: alternative oxidase activity	1.37E-03
29	GO:0015120: phosphoglycerate transmembrane transporter activity	1.37E-03
30	GO:0050373: UDP-arabinose 4-epimerase activity	1.37E-03
31	GO:0004930: G-protein coupled receptor activity	1.37E-03
32	GO:0046527: glucosyltransferase activity	1.37E-03
33	GO:0016929: SUMO-specific protease activity	1.74E-03
34	GO:0008641: small protein activating enzyme activity	1.74E-03
35	GO:0004372: glycine hydroxymethyltransferase activity	1.74E-03
36	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.57E-03
37	GO:0102391: decanoate--CoA ligase activity	2.57E-03
38	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.57E-03
39	GO:0003978: UDP-glucose 4-epimerase activity	2.57E-03
40	GO:0051213: dioxygenase activity	2.76E-03
41	GO:0043295: glutathione binding	3.03E-03
42	GO:0004467: long-chain fatty acid-CoA ligase activity	3.03E-03
43	GO:0016621: cinnamoyl-CoA reductase activity	3.03E-03
44	GO:0030247: polysaccharide binding	3.24E-03
45	GO:0016301: kinase activity	3.49E-03
46	GO:0004708: MAP kinase kinase activity	3.51E-03
47	GO:0005096: GTPase activator activity	3.77E-03
48	GO:0003951: NAD+ kinase activity	4.02E-03
49	GO:0008142: oxysterol binding	4.02E-03
50	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.02E-03
51	GO:0001104: RNA polymerase II transcription cofactor activity	4.02E-03
52	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.54E-03
53	GO:0004364: glutathione transferase activity	5.62E-03
54	GO:0005545: 1-phosphatidylinositol binding	5.67E-03
55	GO:0008327: methyl-CpG binding	6.27E-03
56	GO:0008559: xenobiotic-transporting ATPase activity	6.27E-03
57	GO:0005089: Rho guanyl-nucleotide exchange factor activity	6.27E-03
58	GO:0043531: ADP binding	6.72E-03
59	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.89E-03
60	GO:0004022: alcohol dehydrogenase (NAD) activity	7.52E-03
61	GO:0005315: inorganic phosphate transmembrane transporter activity	7.52E-03
62	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.52E-03
63	GO:0031624: ubiquitin conjugating enzyme binding	8.19E-03
64	GO:0004867: serine-type endopeptidase inhibitor activity	8.87E-03
65	GO:0004407: histone deacetylase activity	1.03E-02
66	GO:0005524: ATP binding	1.11E-02
67	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.18E-02
68	GO:0008810: cellulase activity	1.34E-02
69	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.42E-02
70	GO:0030170: pyridoxal phosphate binding	1.57E-02
71	GO:0005451: monovalent cation:proton antiporter activity	1.59E-02
72	GO:0030276: clathrin binding	1.67E-02
73	GO:0008536: Ran GTPase binding	1.67E-02
74	GO:0046872: metal ion binding	1.74E-02
75	GO:0015299: solute:proton antiporter activity	1.76E-02
76	GO:0004872: receptor activity	1.85E-02
77	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.94E-02
78	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.94E-02
79	GO:0015385: sodium:proton antiporter activity	2.13E-02
80	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.33E-02
81	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.48E-02
82	GO:0000166: nucleotide binding	2.66E-02
83	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.84E-02
84	GO:0030145: manganese ion binding	3.38E-02
85	GO:0004674: protein serine/threonine kinase activity	3.40E-02
86	GO:0004497: monooxygenase activity	3.74E-02
87	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.75E-02
88	GO:0050661: NADP binding	3.96E-02
89	GO:0051539: 4 iron, 4 sulfur cluster binding	3.96E-02
90	GO:0019825: oxygen binding	4.12E-02
91	GO:0005516: calmodulin binding	4.40E-02
92	GO:0051537: 2 iron, 2 sulfur cluster binding	4.57E-02
93	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.81E-02
94	GO:0004722: protein serine/threonine phosphatase activity	4.89E-02
95	GO:0005525: GTP binding	4.91E-02